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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB11FIP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
59.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
57.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
57.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
56.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
53.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
52.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
51.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
48.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
45.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
43.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
43.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
41.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
40.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
39.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
39.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
37.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
36.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
36.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
35.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
35.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
33.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
33.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
33.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
32.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
31.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
31.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
31.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
30.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
30.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
30.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
28.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
26.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
26.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
26.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
25.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
25.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
25.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
24.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
23.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
22.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
22.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
20.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
20.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
19.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
19.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
18.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
18.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
17.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
14.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
14.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
14.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
14.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
12.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
12.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
11.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
9.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
3.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB11FIP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
123.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
80.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
64.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
52.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
44.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
43.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
38.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
36.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
36.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
36.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
34.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
33.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
33.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
32.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
32.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
31.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
30.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
30.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
29.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
29.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
29.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
29.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
28.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
28.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
27.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
27.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
27.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
27.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
26.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
26.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
25.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
25.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
25.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
25.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
24.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
24.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
24.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
24.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
23.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
23.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
23.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
22.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
22.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
22.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
22.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
22.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
22.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
21.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
21.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
20.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
20.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
20.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
19.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
19.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
19.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
19.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
19.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
19.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
19.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
19.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
19.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
19.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
18.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
18.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
18.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
18.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
18.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
18.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
18.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
18.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
18.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
18.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
18.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
18.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
18.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
17.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
17.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
17.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
17.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
17.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
17.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
17.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
17.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
16.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
16.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
16.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
16.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
16.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
16.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
16.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
16.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
15.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.6
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
15.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
15.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
14.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
14.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
14.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
14.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
14.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
14.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
14.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
14.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
14.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
14.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
14.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
14.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
14.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
13.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
13.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
13.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
13.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
13.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
13.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
13.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
13.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
13.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
13.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
13.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
13.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
13.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
13.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
13.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
13.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
13.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
12.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
12.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
12.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
12.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
12.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.6
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
12.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
12.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
12.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
12.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
12.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
12.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
11.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
11.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
11.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
11.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
11.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
11.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
11.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
11.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
11.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
11.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
11.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
11.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
11.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
11.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
11.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
11.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
11.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
11.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
11.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
10.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
10.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
10.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
10.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
10.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
10.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
10.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
10.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
10.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
10.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
10.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
10.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
10.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
10.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
10.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
10.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
10.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
10.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
10.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.0
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
10.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
9.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
9.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
9.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
9.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
9.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
9.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
9.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
9.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
9.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
9.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
9.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
9.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
9.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
9.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
9.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
9.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
9.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
9.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
9.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
9.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
9.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
9.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
9.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
9.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
9.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
9.0
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
9.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
9.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
8.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
8.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
8.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
8.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
8.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
8.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
8.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
8.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
8.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
8.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
8.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
8.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
8.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
8.5
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
8.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
8.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
8.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
8.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
8.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
8.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
8.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
8.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
8.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
8.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
8.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
8.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
8.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
8.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
8.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
8.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
8.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
8.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
8.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
7.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
7.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
7.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
7.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
7.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
7.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
7.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
7.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
7.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
7.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
7.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
7.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
7.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
7.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
7.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
7.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
7.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
7.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
7.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
7.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
7.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
7.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
7.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.2
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
7.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
7.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
7.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
7.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
7.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
6.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
6.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
6.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
6.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
6.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
6.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
6.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
6.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
6.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
6.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
6.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
6.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
6.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
6.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
6.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
6.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
6.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
6.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
6.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
6.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
6.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
6.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
6.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
6.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
6.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
6.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
6.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
6.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
6.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
6.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
6.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
6.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
6.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
5.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
5.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
5.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
5.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
5.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
5.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
5.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
5.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
5.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
5.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
5.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
5.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
5.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
5.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
5.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
5.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
5.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
5.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
5.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
5.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
5.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
5.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
5.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
5.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
5.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
5.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
5.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
5.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
5.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
5.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
5.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
5.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
5.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
5.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
5.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
5.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
4.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
4.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
4.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
4.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
4.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
4.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
4.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
4.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
4.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
4.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
4.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
4.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
4.3
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
4.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
4.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
4.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
4.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
4.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
4.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
4.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
3.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
3.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
3.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
3.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
3.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
3.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
3.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
3.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
3.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
3.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
3.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
3.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
3.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
3.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
2.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
2.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
2.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
2.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
2.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
2.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
2.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
2.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
2.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
1.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB11FIP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
39.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
37.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
32.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
30.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
29.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
28.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
27.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
26.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
26.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
25.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
25.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
25.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
25.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
25.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
24.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
23.9
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
22.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
20.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
19.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
18.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
18.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
17.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
16.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
16.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
16.0
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
15.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
15.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
14.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
14.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
14.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
14.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
14.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
13.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
13.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
13.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
13.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
13.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
12.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
11.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
11.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
11.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
11.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
11.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
11.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
10.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
10.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
10.5
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
10.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
10.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
10.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
10.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
10.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
10.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
10.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
9.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
9.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
9.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
9.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
9.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
8.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
8.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
8.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
8.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
8.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
8.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
7.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
7.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
7.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
7.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
6.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
6.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
6.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
5.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
5.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
5.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
5.7
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
5.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
5.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
4.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RAB11FIP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
168.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
148.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
127.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
100.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
91.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
88.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
81.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
80.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
73.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
69.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
68.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
67.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
65.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
61.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
60.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
56.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
55.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
55.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
52.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
46.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
45.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
45.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
44.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
44.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
44.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
44.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
43.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
43.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
41.2
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
41.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
40.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
40.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
39.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
39.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
39.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
39.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
38.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
38.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
38.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
38.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
38.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
37.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
36.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
36.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
35.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
35.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
34.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
32.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
32.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
32.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
32.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
31.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
31.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
30.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
30.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
30.6
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
30.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
30.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
29.9
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
29.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
29.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
29.1
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
28.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
28.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
28.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
27.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
27.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
27.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
27.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
27.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
27.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
27.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
26.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
26.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
26.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
26.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
26.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
26.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
25.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
25.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
25.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
25.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
25.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
24.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
24.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
24.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
24.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
24.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
23.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
23.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
23.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
23.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
23.3
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
22.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
22.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
22.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
22.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
22.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
21.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
21.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
21.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
20.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
20.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
20.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
20.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
20.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
20.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
20.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
20.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
19.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
19.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
19.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
19.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
19.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
18.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
18.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
18.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
17.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
17.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
17.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
17.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
17.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
17.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
17.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
16.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
16.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
16.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
16.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
16.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
16.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
16.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
16.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
15.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
15.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
15.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
15.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
15.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
15.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
14.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
14.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
14.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
14.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
13.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
13.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
13.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
13.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
13.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
13.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
12.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
12.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
12.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
12.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
12.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
12.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
11.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
11.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
11.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
11.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
11.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
11.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
10.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
10.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
10.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
10.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
10.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.2
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.8
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
9.7
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
9.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
9.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
9.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
9.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
9.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
9.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
9.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
8.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
8.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
8.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
8.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
8.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
8.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
8.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
8.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
7.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
7.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
7.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
7.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
7.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
7.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
7.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
7.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
6.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
6.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
6.6
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
6.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
6.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
6.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
6.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
5.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
5.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
4.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
4.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
4.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
4.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
4.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
4.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
2.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.6
CPT0078660003
Tumor
1.3
CPT0024670003
Tumor
1.0
CPT0086950003
Tumor
0.9
CPT0012900004
Tumor
0.9
CPT0019130003
Tumor
0.8
CPT0088550004
Tumor
0.8
CPT0001220008
Tumor
0.7
CPT0065430003
Tumor
0.7
CPT0017850003
Tumor
0.7
CPT0014450004
Tumor
0.7
CPT0078990003
Tumor
0.6
CPT0012370003
Tumor
0.6
CPT0025050003
Tumor
0.6
CPT0011410003
Tumor
0.6
CPT0006630003
Tumor
0.6
CPT0088900003
Tumor
0.6
CPT0002270011
Tumor
0.6
CPT0078800003
Tumor
0.5
CPT0014160003
Tumor
0.5
CPT0078830003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0076330003
Tumor
0.4
CPT0077310003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0069000003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0001500009
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0086360003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0002350011
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0079510001
Normal
0.2
CPT0084590001
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0079230003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0001270001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0087040003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0066480003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0077320001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0001230001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0092190003
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0065810003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0077140001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0007870001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0010160003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0078510003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0081880003
Tumor
-0.1
CPT0065450001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0012290003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0088500001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0092740003
Normal
-0.2
CPT0086830003
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0066470004
Tumor
-0.2
CPT0063640001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0025060001
Normal
-0.2
CPT0079430001
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0065820001
Normal
-0.2
CPT0000780007
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0088920001
Normal
-0.2
CPT0088760003
Tumor
-0.2
CPT0092290003
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0089040001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0075570001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0013790003
Normal
-0.3
CPT0023360001
Normal
-0.3
CPT0020120003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0000890001
Normal
-0.3
CPT0015910003
Tumor
-0.3
CPT0014370004
Tumor
-0.4
CPT0065870003
Tumor
-0.4
CPT0015730003
Tumor
-0.4
CPT0063320003
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0071150004
Tumor
-0.5
CPT0012280003
Tumor
-0.5
CPT0069160003
Tumor
-0.5
CPT0088630003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0006440003
Tumor
-0.5
CPT0086820003
Tumor
-0.6
CPT0012550003
Tumor
-0.6
CPT0001340003
Tumor
-1.0
CPT0085670003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
