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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UQCRB is not prognostic in Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
241.0
Number of samples
283
Samples
Sample
Description
TPM
TCGA-IR-A3LA-01A
0 years, female, white, stage:Stage IB, alive, 4172 days
814.2
TCGA-EA-A4BA-01A
0 years, female, white, stage:Stage IB, alive, 755 days
772.3
TCGA-EK-A2PM-01A
0 years, female, white, stage:Stage IIB, alive, 18 days
704.7
TCGA-LP-A4AU-01A
0 years, female, asian, stage:Stage IIIB, alive, 343 days
665.0
TCGA-HM-A6W2-01A
0 years, female, black or african american, stage:Stage IVB, alive, 287 days
655.0
TCGA-EK-A2PG-01A
0 years, female, black or african american, stage:'--, alive, 46 days
649.1
TCGA-EK-A2RK-01A
0 years, female, white, stage:Stage IA, alive, 13 days
611.0
TCGA-Q1-A73S-01A
0 years, female, white, stage:Stage IB, alive, 688 days
596.8
TCGA-C5-A8YQ-01A
0 years, female, white, stage:Stage IB, dead, 715 days
523.5
TCGA-VS-A953-01A
0 years, female, stage:Stage IVA, dead, 477 days
503.3
TCGA-EK-A2H0-01A
0 years, female, white, stage:Stage IIB, alive, 1847 days
497.0
TCGA-RA-A741-01A
0 years, female, white, stage:Stage IIB, alive, 444 days
484.5
TCGA-C5-A902-01A
0 years, female, black or african american, stage:Stage IB, alive, 149 days
480.7
TCGA-MU-A5YI-01A
0 years, female, black or african american, stage:Stage IA, alive, 1053 days
477.7
TCGA-JX-A3Q8-01A
0 years, female, asian, stage:Stage IB, alive, 1357 days
468.7
TCGA-FU-A57G-01A
0 years, female, white, stage:Stage IB, alive, 1078 days
433.4
TCGA-EK-A2RL-01A
0 years, female, black or african american, stage:Stage IB, dead, 1453 days
424.9
TCGA-MA-AA42-01A
0 years, female, white, stage:Stage IIB, alive, 259 days
420.2
TCGA-Q1-A73Q-01A
0 years, female, white, stage:Stage I, alive, 284 days
411.1
TCGA-IR-A3LK-01A
0 years, female, white, stage:Stage IB, dead, 908 days
407.2
TCGA-VS-A9UV-01A
0 years, female, stage:Stage IVA, dead, 104 days
400.6
TCGA-R2-A69V-01A
0 years, female, white, stage:Stage IB, alive, 596 days
397.2
TCGA-VS-A9V4-01A
0 years, female, white, stage:Stage IVA, dead, 132 days
396.4
TCGA-C5-A7CG-01A
0 years, female, white, stage:Stage IB, alive, 6408 days
395.2
TCGA-Q1-A5R2-01A
0 years, female, white, stage:'--, alive, 499 days
388.0
TCGA-VS-A8EC-01A
0 years, female, white, stage:Stage IIIB, alive, 1415 days
387.0
TCGA-C5-A7UH-01A
0 years, female, white, stage:Stage IIIB, alive, 3988 days
387.0
TCGA-BI-A0VS-01A
0 years, female, white, stage:Stage IB, alive, 1735 days
384.6
TCGA-DS-A0VM-01A
0 years, female, white, stage:Stage IB, alive, 3589 days
383.1
TCGA-EA-A50E-01A
0 years, female, asian, stage:Stage IVA, dead, 227 days
376.9
TCGA-VS-A9V0-01A
0 years, female, stage:Stage IB, alive, 573 days
374.1
TCGA-EX-A8YF-01A
0 years, female, white, stage:Stage IB, alive, 473 days
372.5
TCGA-DS-A1OB-01A
0 years, female, white, stage:Stage IB, dead, 861 days
372.2
TCGA-FU-A3EO-01A
0 years, female, white, stage:Stage IIB, alive, 490 days
372.0
TCGA-VS-A950-01A
0 years, female, stage:Stage IIIA, alive, 1221 days
359.8
TCGA-JW-A5VL-01A
0 years, female, american indian or alaska native, stage:Stage IB, alive, 474 days
358.5
TCGA-EA-A3QD-01A
0 years, female, white, stage:Stage IIIB, alive, 397 days
354.3
TCGA-C5-A907-01A
0 years, female, white, stage:Stage IB, alive, 448 days
354.3
TCGA-VS-A9V2-01A
0 years, female, white, stage:Stage IB, alive, 555 days
351.5
TCGA-EK-A2R8-01A
0 years, female, white, stage:Stage IB, alive, 44 days
345.2
TCGA-C5-A1MF-01A
0 years, female, white, stage:Stage IB, alive, 1617 days
344.6
TCGA-C5-A2M1-01A
0 years, female, white, stage:Stage IB, alive, 1169 days
343.5
TCGA-LP-A4AX-01A
0 years, female, asian, stage:Stage IB, alive, 380 days
343.0
TCGA-FU-A3WB-01A
0 years, female, white, stage:Stage IIA, alive, 491 days
342.9
TCGA-EX-A69L-01A
0 years, female, asian, stage:Stage IB, alive, 602 days
342.2
TCGA-Q1-A73P-01A
0 years, female, white, stage:Stage IB, alive, 483 days
340.0
TCGA-2W-A8YY-01A
0 years, female, white, stage:Stage IB, alive, 533 days
339.2
TCGA-EA-A44S-01A
0 years, female, white, stage:Stage IIIB, alive, 369 days
339.0
TCGA-EK-A2IR-01A
0 years, female, white, stage:Stage IB, alive, 3442 days
339.0
TCGA-EA-A1QT-01A
0 years, female, white, stage:Stage IB, alive, 1243 days
337.4
TCGA-VS-A8EB-01A
0 years, female, white, stage:Stage IIIB, dead, 305 days
330.0
TCGA-C5-A8ZZ-01A
0 years, female, white, stage:Stage IIB, alive, 636 days
329.4
TCGA-EA-A3Y4-01A
0 years, female, white, stage:Stage IB, alive, 1122 days
328.1
TCGA-EK-A3GK-01A
0 years, female, white, stage:Stage IB, alive, 15 days
327.7
TCGA-MY-A5BF-01A
0 years, female, white, stage:Stage IIA, alive, 634 days
327.5
TCGA-EX-A1H5-01A
0 years, female, black or african american, stage:Stage IIB, alive, 619 days
326.0
TCGA-VS-A952-01A
0 years, female, white, stage:Stage IB, alive, 1778 days
325.1
TCGA-BI-A20A-01A
0 years, female, white, stage:Stage IB, alive, 720 days
323.4
TCGA-C5-A2LV-01A
0 years, female, black or african american, stage:Stage IB, alive, 2234 days
322.0
TCGA-LP-A4AW-01A
0 years, female, asian, stage:Stage IA, alive, 27 days
321.9
TCGA-DS-A1OA-01A
0 years, female, asian, stage:Stage IB, dead, 879 days
319.9
TCGA-EA-A5FO-01A
0 years, female, white, stage:Stage IB, alive, 815 days
316.0
TCGA-VS-A8Q9-01A
0 years, female, white, stage:Stage IB, alive, 1630 days
314.9
TCGA-EK-A2PK-01A
0 years, female, white, stage:Stage IB, alive, 12 days
313.5
TCGA-EK-A2RB-01A
0 years, female, white, stage:Stage IVB, alive, 9 days
312.8
TCGA-FU-A3HZ-01A
0 years, female, white, stage:Stage IIA, alive, 1103 days
311.5
TCGA-C5-A1MQ-01A
0 years, female, white, stage:Stage IIA, alive, 1031 days
310.6
TCGA-EA-A78R-01A
0 years, female, asian, stage:Stage IB, alive, 410 days
307.8
TCGA-C5-A2M2-01A
0 years, female, white, stage:Stage IB, dead, 1011 days
307.3
TCGA-FU-A770-01A
0 years, female, white, stage:Stage IIIB, alive, 34 days
306.3
TCGA-FU-A3YQ-01A
0 years, female, white, stage:Stage IB, alive, 861 days
304.5
TCGA-EK-A3GN-01A
0 years, female, white, stage:Stage IIIB, alive, 27 days
303.6
TCGA-Q1-A6DV-01A
0 years, female, asian, stage:Stage IB, alive, 491 days
303.3
TCGA-VS-A8EJ-01A
0 years, female, white, stage:Stage IIB, dead, 607 days
299.3
TCGA-C5-A8YT-01A
0 years, female, white, stage:Stage IB, dead, 633 days
294.6
TCGA-C5-A8XK-01A
0 years, female, black or african american, stage:'--, alive, 3039 days
292.5
TCGA-C5-A7CK-01A
0 years, female, white, stage:Stage IVA, dead, 4086 days
292.2
TCGA-DS-A0VL-01A
0 years, female, white, stage:Stage IB, dead, 1692 days
290.7
TCGA-MY-A5BE-01A
0 years, female, black or african american, stage:Stage IB, alive, 1066 days
285.5
TCGA-C5-A8XI-01A
0 years, female, black or african american, stage:Stage IB, alive, 254 days
285.1
TCGA-C5-A1MN-01A
0 years, female, white, stage:Stage IIIB, dead, 1245 days
280.0
TCGA-VS-A9U6-01A
0 years, female, white, stage:Stage IVB, alive, 1320 days
279.5
TCGA-EK-A3GJ-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IB, alive, 3 days
278.0
TCGA-EK-A2RM-01A
0 years, female, white, stage:Stage IB, alive, 50 days
276.8
TCGA-ZJ-AAXA-01A
0 years, female, white, stage:Stage IB, alive, 43 days
276.3
TCGA-VS-A954-01A
0 years, female, stage:Stage IIIB, alive, 1714 days
276.0
TCGA-IR-A3LI-01A
0 years, female, white, stage:Stage IVB, alive, 2493 days
276.0
TCGA-VS-A9UY-01A
0 years, female, stage:Stage IVB, dead, 555 days
275.7
TCGA-EK-A2RC-01A
0 years, female, stage:Stage IB, alive, 129 days
273.5
TCGA-C5-A8YR-01A
0 years, female, white, stage:Stage IB, dead, 837 days
273.1
TCGA-MA-AA3X-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 617 days
271.2
TCGA-C5-A1BM-01A
0 years, female, black or african american, stage:Stage IB, dead, 2520 days
271.1
TCGA-C5-A8XJ-01A
0 years, female, white, stage:Stage IB, alive, 4467 days
271.1
TCGA-C5-A1MJ-01A
0 years, female, white, stage:Stage IB, dead, 14 days
271.0
TCGA-Q1-A6DW-01A
0 years, female, white, stage:Stage I, alive, 534 days
268.3
TCGA-DS-A5RQ-01A
0 years, female, white, stage:Stage IB, alive, 512 days
268.0
TCGA-FU-A3HY-01A
0 years, female, white, stage:Stage IB, alive, 954 days
263.8
TCGA-DS-A1OD-01A
0 years, female, white, stage:Stage IB, alive, 3874 days
261.3
TCGA-VS-A9UB-01A
0 years, female, stage:Stage IIB, alive, 911 days
260.7
TCGA-EK-A2RO-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 2 days
260.3
TCGA-C5-A1M9-01A
0 years, female, white, stage:Stage IB, dead, 1065 days
260.2
TCGA-C5-A7CO-01A
0 years, female, white, stage:Stage IB, alive, 4482 days
259.6
TCGA-DG-A2KK-01A
0 years, female, stage:Stage IIIB, alive, 2496 days
257.8
TCGA-EK-A2H1-01A
0 years, female, white, stage:Stage IB, alive, 799 days
256.3
TCGA-DS-A0VN-01A
0 years, female, white, stage:Stage IB, alive, 3609 days
254.3
TCGA-EA-A556-01A
0 years, female, white, stage:Stage IB, alive, 453 days
254.2
TCGA-IR-A3LL-01A
0 years, female, white, stage:Stage IB, alive, 1106 days
251.6
TCGA-EA-A5ZD-01A
0 years, female, asian, stage:Stage IB, alive, 830 days
249.7
TCGA-DS-A3LQ-01A
0 years, female, stage:Stage IIIB, alive, 699 days
249.6
TCGA-VS-A94Y-01A
0 years, female, white, stage:Stage IIB, dead, 144 days
249.2
TCGA-EK-A2RE-01A
0 years, female, white, stage:Stage IIA, alive, 57 days
248.3
TCGA-JW-A69B-01A
0 years, female, white, stage:Stage IB, alive, 863 days
246.9
TCGA-IR-A3LF-01A
0 years, female, white, stage:Stage IB, alive, 2949 days
245.5
TCGA-IR-A3LB-01A
0 years, female, white, stage:Stage IB, dead, 2032 days
244.3
TCGA-MA-AA43-01A
0 years, female, white, stage:Stage IIIB, alive, 346 days
242.6
TCGA-C5-A1M8-01A
0 years, female, white, stage:Stage IB, alive, 919 days
242.4
TCGA-EA-A410-01A
0 years, female, white, stage:Stage IIA, alive, 803 days
241.6
TCGA-DR-A0ZL-01A
0 years, female, asian, stage:Stage IB, alive, 2669 days
241.5
TCGA-DS-A7WF-01A
0 years, female, stage:Stage IB, dead, 492 days
240.6
TCGA-EK-A2R9-01A
0 years, female, white, stage:Stage IB, alive, 4 days
239.4
TCGA-VS-A8EK-01A
0 years, female, white, stage:Stage IVA, dead, 829 days
239.1
TCGA-VS-A9UQ-01A
0 years, female, stage:Stage IB, alive, 1263 days
237.9
TCGA-EK-A2R7-01A
0 years, female, white, stage:Stage IB, alive, 27 days
237.0
TCGA-VS-A8QM-01A
0 years, female, stage:Stage IVB, dead, 951 days
235.1
TCGA-HG-A2PA-01A
0 years, female, white, stage:Stage IB, dead, 773 days
234.3
TCGA-EA-A3QE-01A
0 years, female, white, stage:Stage IB, alive, 761 days
234.0
TCGA-C5-A905-01A
0 years, female, black or african american, stage:Stage IB, alive, 4879 days
233.9
TCGA-JX-A5QV-01A
0 years, female, white, stage:Stage IB, alive, 636 days
233.0
TCGA-HM-A3JJ-01A
0 years, female, black or african american, stage:Stage IB, dead, 659 days
232.5
TCGA-FU-A23L-01A
0 years, female, white, stage:Stage IIA, alive, 725 days
232.2
TCGA-JW-A5VK-01A
0 years, female, black or african american, stage:Stage IB, alive, 623 days
231.7
TCGA-C5-A1MI-01A
0 years, female, white, stage:Stage IB, dead, 1083 days
231.5
TCGA-C5-A7UE-01A
0 years, female, white, stage:Stage IB, alive, 4738 days
230.2
TCGA-Q1-A73R-01A
0 years, female, white, stage:Stage I, alive, 567 days
228.4
TCGA-C5-A7XC-01A
0 years, female, white, stage:Stage IB, alive, 1551 days
227.0
TCGA-EA-A411-01A
0 years, female, white, stage:Stage IB, alive, 747 days
227.0
TCGA-VS-A9UR-01A
0 years, female, white, stage:Stage IIA, alive, 793 days
226.9
TCGA-C5-A2LX-01A
0 years, female, white, stage:Stage IB, alive, 2526 days
225.6
TCGA-C5-A7UI-01A
0 years, female, black or african american, stage:Stage IB, dead, 2888 days
223.9
TCGA-ZJ-A8QQ-01A
0 years, female, white, stage:Stage IIB, alive, 2056 days
218.6
TCGA-EA-A439-01A
0 years, female, asian, stage:Stage IIA, alive, 965 days
218.3
TCGA-VS-A9U7-01A
0 years, female, white, stage:Stage IB, alive, 1472 days
218.2
TCGA-C5-A1MH-01A
0 years, female, white, stage:Stage IIIB, dead, 1186 days
218.1
TCGA-UC-A7PG-01A
0 years, female, white, stage:Stage IIIB, dead, 370 days
218.1
TCGA-C5-A2LS-01A
0 years, female, white, stage:Stage IB, alive, 1345 days
216.7
TCGA-ZJ-AAX4-01A
0 years, female, white, stage:Stage II, alive, 21 days
216.6
TCGA-C5-A1MK-01A
0 years, female, white, stage:Stage IIIB, dead, 74 days
215.9
TCGA-FU-A5XV-01A
0 years, female, white, stage:Stage IIIB, alive, 321 days
215.3
TCGA-DG-A2KH-01A
0 years, female, stage:Stage IB, alive, 34 days
214.3
TCGA-FU-A3NI-01A
0 years, female, white, stage:Stage IB, dead, 638 days
213.8
TCGA-MY-A913-01A
0 years, female, black or african american, stage:Stage IIA, alive, 524 days
213.5
TCGA-VS-A94Z-01A
0 years, female, white, stage:Stage IIB, alive, 1015 days
212.1
TCGA-EA-A6QX-01A
0 years, female, asian, stage:Stage IIIB, alive, 730 days
211.6
TCGA-Q1-A73O-01A
0 years, female, stage:Stage IB, alive, 428 days
211.3
TCGA-C5-A1BL-01A
0 years, female, white, stage:Stage IB, alive, 5271 days
210.2
TCGA-C5-A7UC-01A
0 years, female, white, stage:Stage IB, dead, 523 days
209.7
TCGA-C5-A2LT-01A
0 years, female, white, stage:Stage IB, alive, 2226 days
209.6
TCGA-C5-A3HF-01A
0 years, female, white, stage:Stage IB, dead, 543 days
208.9
TCGA-VS-A9UZ-01A
0 years, female, white, stage:Stage IB, alive, 2044 days
208.5
TCGA-VS-A957-01A
0 years, female, white, stage:Stage IB, alive, 1688 days
208.5
TCGA-ZJ-A8QR-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage I, dead, 582 days
207.8
TCGA-DS-A0VK-01A
0 years, female, white, stage:Stage IB, dead, 1118 days
207.3
TCGA-XS-A8TJ-01A
0 years, female, black or african american, stage:Stage IB, alive, 890 days
205.2
TCGA-EA-A97N-01A
0 years, female, white, stage:Stage IB, alive, 11 days
203.7
TCGA-VS-A9UD-01A
0 years, female, white, stage:Stage IIIA, alive, 739 days
202.0
TCGA-VS-A9UU-01A
0 years, female, stage:Stage IIB, alive, 442 days
200.4
TCGA-4J-AA1J-01A
0 years, female, white, stage:Stage IB, alive, 542 days
199.6
TCGA-C5-A8XH-01A
0 years, female, white, stage:Stage IB, dead, 1394 days
199.5
TCGA-EK-A2RJ-01A
0 years, female, white, stage:Stage IB, alive, 53 days
198.9
TCGA-VS-A8QH-01A
0 years, female, white, stage:Stage IB, dead, 1210 days
196.4
TCGA-EK-A2GZ-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 383 days
195.7
TCGA-EK-A2IP-01A
0 years, female, white, stage:Stage IB, alive, 202 days
195.1
TCGA-EX-A449-01A
0 years, female, white, stage:Stage IVB, alive, 447 days
191.4
TCGA-VS-A8EG-01A
0 years, female, stage:Stage IB, alive, 1386 days
189.5
TCGA-MY-A5BD-01A
0 years, female, white, stage:Stage IIB, alive, 1667 days
187.3
TCGA-Q1-A5R1-01A
0 years, female, white, stage:Stage IB, alive, 474 days
186.2
TCGA-JX-A3PZ-01A
0 years, female, white, stage:Stage IB, dead, 642 days
185.1
TCGA-FU-A3TQ-01A
0 years, female, white, stage:Stage IIIB, alive, 795 days
183.4
TCGA-VS-A8Q8-01A
0 years, female, white, stage:Stage IB, dead, 978 days
183.0
TCGA-VS-AA62-01A
0 years, female, white, stage:Stage IIB, dead, 469 days
183.0
TCGA-BI-A0VR-01A
0 years, female, white, stage:Stage IIIB, alive, 1505 days
183.0
TCGA-C5-A1M6-01A
0 years, female, white, stage:Stage IIB, dead, 955 days
183.0
TCGA-C5-A3HL-01A
0 years, female, white, stage:Stage IB, alive, 621 days
182.5
TCGA-VS-A8QF-01A
0 years, female, white, stage:Stage IIB, alive, 1800 days
182.5
TCGA-MA-AA3Z-01A
0 years, female, white, stage:Stage IB, alive, 595 days
181.6
TCGA-VS-A9UM-01A
0 years, female, black or african american, stage:Stage IVB, dead, 829 days
180.7
TCGA-DG-A2KL-01A
0 years, female, stage:Stage IIA, alive, 1367 days
180.6
TCGA-VS-A8QA-01A
0 years, female, stage:Stage IB, alive, 1099 days
177.7
TCGA-MA-AA41-01A
0 years, female, white, stage:Stage IIB, alive, 279 days
177.3
TCGA-WL-A834-01A
0 years, female, white, stage:'--, alive, 791 days
177.3
TCGA-Q1-A5R3-01A
0 years, female, white, stage:'--, alive, 485 days
177.2
TCGA-LP-A5U3-01A
0 years, female, asian, stage:Stage IB, alive, 25 days
177.1
TCGA-C5-A1M7-01A
0 years, female, white, stage:Stage IB, alive, 1409 days
175.7
TCGA-VS-A958-01A
0 years, female, white, stage:Stage IIB, alive, 1525 days
175.3
TCGA-EK-A2RA-01A
0 years, female, stage:Stage IIA, alive, 1246 days
174.5
TCGA-FU-A40J-01A
0 years, female, white, stage:Stage IIIB, alive, 426 days
174.2
TCGA-EA-A3HR-01A
0 years, female, white, stage:Stage II, alive, 940 days
173.3
TCGA-Q1-A6DT-01A
0 years, female, white, stage:Stage I, dead, 275 days
172.6
TCGA-C5-A3HE-01A
0 years, female, white, stage:Stage IB, alive, 548 days
172.2
TCGA-VS-A9UJ-01A
0 years, female, stage:Stage IIB, dead, 52 days
171.5
TCGA-UC-A7PF-01A
0 years, female, stage:Stage IB, dead, 2859 days
171.1
TCGA-EA-A3HQ-01A
0 years, female, white, stage:Stage II, alive, 1136 days
171.0
TCGA-FU-A3TX-01A
0 years, female, stage:Stage IB, alive, 45 days
170.6
TCGA-C5-A7CH-01A
0 years, female, white, stage:Stage IIB, alive, 4694 days
170.0
TCGA-VS-A8EI-01A
0 years, female, white, stage:Stage IIB, alive, 729 days
169.6
TCGA-MU-A51Y-01A
0 years, female, white, stage:Stage IIA, alive, 854 days
169.5
TCGA-ZX-AA5X-01A
0 years, female, white, stage:Stage IIIB, alive, 119 days
168.8
TCGA-DS-A1O9-01A
0 years, female, white, stage:Stage IVA, dead, 266 days
167.9
TCGA-JX-A3Q0-01A
0 years, female, black or african american, stage:Stage III, alive, 6375 days
167.6
TCGA-VS-A9UH-01A
0 years, female, black or african american, stage:Stage IVA, alive, 1427 days
166.6
TCGA-VS-A9UO-01A
0 years, female, white, stage:Stage IIB, alive, 1456 days
166.1
TCGA-C5-A2LZ-01A
0 years, female, white, stage:Stage IIIB, dead, 3046 days
165.4
TCGA-IR-A3LC-01A
0 years, female, white, stage:Stage IB, alive, 3935 days
163.5
TCGA-DG-A2KM-01A
0 years, female, stage:Stage IB, alive, 1946 days
163.4
TCGA-C5-A0TN-01A
0 years, female, black or african american, stage:Stage IB, dead, 348 days
161.2
TCGA-VS-A9UC-01A
0 years, female, stage:Stage IIB, alive, 825 days
154.5
TCGA-EK-A2PL-01A
0 years, female, white, stage:Stage IIIB, alive, 13 days
153.3
TCGA-FU-A23K-01A
0 years, female, white, stage:Stage IIIB, alive, 372 days
150.6
TCGA-VS-A9V3-01A
0 years, female, white, stage:Stage IVB, alive, 540 days
150.1
TCGA-DS-A1OC-01A
0 years, female, white, stage:Stage IB, alive, 376 days
148.4
TCGA-C5-A1BJ-01A
0 years, female, white, stage:Stage IIB, alive, 4385 days
148.2
TCGA-MA-AA3Y-01A
0 years, female, white, stage:Stage IB, alive, 542 days
146.4
TCGA-VS-A9UI-01A
0 years, female, white, stage:Stage IIB, dead, 1372 days
144.4
TCGA-C5-A7X8-01A
0 years, female, white, stage:Stage IB, alive, 83 days
144.1
TCGA-DS-A7WH-01A
0 years, female, white, stage:Stage IB, alive, 533 days
142.9
TCGA-VS-A8EL-01A
0 years, female, black or african american, stage:Stage IIB, alive, 1992 days
142.1
TCGA-HM-A3JK-01A
0 years, female, white, stage:Stage IIA, alive, 632 days
141.4
TCGA-VS-A8QC-01A
0 years, female, white, stage:Stage IVA, dead, 350 days
136.9
TCGA-JW-A5VG-01A
0 years, female, american indian or alaska native, stage:Stage IIA, alive, 834 days
136.8
TCGA-C5-A2LY-01A
0 years, female, white, stage:Stage IB, alive, 2383 days
134.6
TCGA-IR-A3L7-01A
0 years, female, white, stage:Stage IB, alive, 4483 days
133.5
TCGA-UC-A7PI-01A
0 years, female, white, stage:Stage IB, alive, 2114 days
131.5
TCGA-VS-A8EH-01A
0 years, female, stage:Stage IIIB, alive, 986 days
131.3
TCGA-FU-A2QG-01A
0 years, female, white, stage:Stage IB, alive, 579 days
131.2
TCGA-HM-A4S6-01A
0 years, female, white, stage:Stage IIIB, alive, 454 days
131.1
TCGA-C5-A1MP-01A
0 years, female, black or african american, stage:Stage IB, alive, 109 days
129.8
TCGA-DS-A7WI-01A
0 years, female, white, stage:Stage IIA, dead, 252 days
129.1
TCGA-C5-A7X3-01A
0 years, female, white, stage:Stage IIIB, dead, 284 days
124.8
TCGA-EA-A3HT-01A
0 years, female, white, stage:Stage IB, alive, 954 days
124.4
TCGA-VS-A94X-01A
0 years, female, black or african american, stage:Stage IIB, dead, 506 days
123.6
TCGA-JW-A5VH-01A
0 years, female, american indian or alaska native, stage:Stage IVB, dead, 100 days
122.9
TCGA-JW-AAVH-01A
0 years, female, white, stage:Stage IB, alive, 552 days
122.7
TCGA-C5-A1ME-01A
0 years, female, white, stage:Stage IB, alive, 1756 days
122.3
TCGA-EA-A5O9-01A
0 years, female, white, stage:Stage IB, alive, 788 days
122.1
TCGA-EK-A2PI-01A
0 years, female, white, stage:Stage IIIB, alive, 586 days
121.5
TCGA-C5-A7CM-01A
0 years, female, white, stage:Stage IB, alive, 619 days
121.3
TCGA-JW-A852-01A
0 years, female, white, stage:Stage IIB, dead, 252 days
121.2
TCGA-C5-A1M5-01A
0 years, female, white, stage:Stage IB, dead, 2052 days
118.6
TCGA-EA-A3HS-01A
0 years, female, white, stage:Stage IB, alive, 959 days
118.1
TCGA-EX-A3L1-01A
0 years, female, white, stage:Stage IIA, alive, 463 days
117.5
TCGA-VS-A9U5-01A
0 years, female, white, stage:Stage IIB, alive, 1535 days
115.9
TCGA-C5-A7CJ-01A
0 years, female, white, stage:Stage IIA, dead, 3097 days
115.2
TCGA-DR-A0ZM-01A
0 years, female, white, stage:Stage IIIB, alive, 1791 days
113.9
TCGA-EK-A2RN-01A
0 years, female, white, stage:Stage IB, alive, 71 days
113.0
TCGA-EX-A69M-01A
0 years, female, white, stage:Stage IB, dead, 253 days
110.7
TCGA-UC-A7PD-01A
0 years, female, american indian or alaska native, stage:Stage IB, dead, 355 days
110.6
TCGA-ZJ-AAXU-01A
0 years, female, white, stage:Stage IIB, alive, 5 days
109.2
TCGA-EA-A3HU-01A
0 years, female, white, stage:Stage II, alive, 1013 days
108.3
TCGA-C5-A1ML-01A
0 years, female, white, stage:Stage IB, dead, 636 days
108.3
TCGA-VS-A9V1-01A
0 years, female, white, stage:Stage IVB, dead, 157 days
107.0
TCGA-VS-A9UL-01A
0 years, female, white, stage:Stage IIIB, dead, 442 days
106.7
TCGA-VS-A9V5-01A
0 years, female, white, stage:Stage IIB, dead, 494 days
103.5
TCGA-VS-A9UP-01A
0 years, female, stage:Stage IIA, alive, 1444 days
102.3
TCGA-C5-A901-01A
0 years, female, white, stage:'--, alive, 518 days
101.2
TCGA-MA-AA3W-01A
0 years, female, white, stage:Stage IB, alive, 685 days
100.5
TCGA-JW-A5VJ-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 652 days
99.5
TCGA-EA-A5ZE-01A
0 years, female, asian, stage:Stage IB, alive, 829 days
95.9
TCGA-IR-A3LH-01A
0 years, female, black or african american, stage:Stage IIA, alive, 2394 days
94.4
TCGA-EA-A5ZF-01A
0 years, female, asian, stage:Stage IB, alive, 828 days
94.1
TCGA-JW-A5VI-01A
0 years, female, american indian or alaska native, stage:Stage IIB, alive, 747 days
93.0
TCGA-LP-A7HU-01A
0 years, female, asian, stage:Stage II, alive, 406 days
92.1
TCGA-EA-A1QS-01A
0 years, female, white, stage:Stage IB, alive, 1203 days
91.9
TCGA-MU-A8JM-01A
0 years, female, white, stage:Stage IB, alive, 607 days
90.2
TCGA-VS-A959-01A
0 years, female, stage:Stage IIB, alive, 1561 days
86.3
TCGA-LP-A5U2-01A
0 years, female, asian, stage:Stage IIIB, alive, 9 days
81.3
TCGA-C5-A7CL-01A
0 years, female, white, stage:Stage IIIB, dead, 471 days
76.1
TCGA-PN-A8MA-01A
0 years, female, black or african american, stage:Stage IIB, alive, 90 days
74.7
TCGA-DG-A2KJ-01A
0 years, female, stage:Stage IIIB, alive, 2893 days
66.3
TCGA-C5-A7X5-01A
0 years, female, black or african american, stage:Stage IVB, dead, 414 days
66.3
TCGA-GH-A9DA-01A
0 years, female, white, stage:Stage IB, alive, 540 days
64.9
TCGA-VS-A94W-01A
0 years, female, white, stage:Stage IIB, alive, 1243 days
56.9
TCGA-EA-A43B-01A
0 years, female, white, stage:Stage IB, alive, 791 days
43.9
TCGA-VS-A9UT-01A
0 years, female, asian, stage:Stage IB, alive, 482 days
43.7
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CERVICAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.