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HEAD AND NECK SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SCAF4 is not prognostic in Head and Neck Squamous Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.3
Number of samples
492
Samples
Sample
Description
TPM
TCGA-CR-7398-01A
0 years, female, white, stage:Stage II, alive, 156 days
32.1
TCGA-HD-8314-01A
0 years, male, white, stage:Stage III, alive, 670 days
28.5
TCGA-CV-7414-01A
0 years, male, white, stage:Stage IVA, dead, 14 days
27.5
TCGA-QK-A6VB-01A
0 years, male, white, stage:Stage IVA, alive, 641 days
26.7
TCGA-CV-5430-01A
0 years, male, white, stage:Stage IVA, alive, 4241 days
24.6
TCGA-CN-5356-01A
0 years, male, white, stage:Stage III, alive, 1409 days
24.2
TCGA-CR-7390-01A
0 years, male, white, stage:Stage IVA, alive, 1508 days
24.1
TCGA-CR-6478-01A
0 years, female, white, stage:'--, dead, 183 days
23.6
TCGA-BA-5153-01A
0 years, male, white, stage:'--, dead, 1762 days
23.4
TCGA-HD-7754-01A
0 years, male, white, stage:Stage IVA, alive, 783 days
23.4
TCGA-CV-6939-01A
0 years, male, white, stage:Stage IVA, dead, 666 days
23.2
TCGA-CN-5360-01A
0 years, male, white, stage:Stage IVA, alive, 2169 days
23.1
TCGA-CR-7368-01A
0 years, male, white, stage:Stage IVA, alive, 1245 days
22.7
TCGA-P3-A5QE-01A
0 years, male, white, stage:Stage III, alive, 1559 days
22.6
TCGA-CR-6472-01A
0 years, male, white, stage:'--, alive, 1050 days
22.5
TCGA-CV-7100-01A
0 years, male, white, stage:Stage III, dead, 274 days
22.4
TCGA-DQ-7591-01A
0 years, male, white, stage:'--, alive, 622 days
22.3
TCGA-CV-5435-01A
0 years, male, white, stage:Stage IVA, dead, 2319 days
21.7
TCGA-CR-6480-01A
0 years, male, white, stage:'--, alive, 362 days
21.7
TCGA-D6-6823-01A
0 years, male, white, stage:Stage II, alive, 701 days
21.6
TCGA-CR-7374-01A
0 years, female, white, stage:'--, alive, 30 days
21.6
TCGA-QK-A6V9-01A
0 years, male, white, stage:Stage II, alive, 833 days
21.6
TCGA-CR-7404-01A
0 years, male, white, stage:'--, alive, 1472 days
21.4
TCGA-CR-7402-01A
0 years, male, white, stage:'--, alive, 911 days
21.3
TCGA-CR-7373-01A
0 years, male, white, stage:Stage IVA, alive, 889 days
21.0
TCGA-CR-7364-01A
0 years, male, white, stage:Stage III, alive, 1435 days
20.7
TCGA-WA-A7GZ-01A
0 years, male, white, stage:'--, dead, 625 days
20.5
TCGA-CV-7253-01A
0 years, male, black or african american, stage:Stage IVA, dead, 361 days
20.4
TCGA-BA-4078-01A
0 years, male, white, stage:'--, dead, 276 days
20.2
TCGA-BA-5555-01A
0 years, male, black or african american, stage:Stage IVA, alive, 520 days
20.2
TCGA-CR-7382-01A
0 years, male, white, stage:Stage IVA, alive, 796 days
20.1
TCGA-RS-A6TP-01A
0 years, male, white, stage:Stage II, alive, 516 days
20.0
TCGA-D6-8569-01A
0 years, male, white, stage:Stage II, alive, 770 days
19.9
TCGA-QK-A8Z8-01A
0 years, female, black or african american, stage:Stage IVC, dead, 171 days
19.9
TCGA-CN-5364-01A
0 years, male, white, stage:Stage IVA, dead, 493 days
19.8
TCGA-CN-6989-01A
0 years, male, white, stage:Stage IVA, dead, 980 days
19.8
TCGA-CV-5434-01A
0 years, male, black or african american, stage:Stage IVA, dead, 3314 days
19.7
TCGA-CV-7236-01A
0 years, female, white, stage:Stage IVA, dead, 144 days
19.6
TCGA-HD-7832-01A
0 years, male, white, stage:Stage IVA, alive, 836 days
19.6
TCGA-CV-7250-01A
0 years, male, white, stage:Stage IVA, dead, 2900 days
19.6
TCGA-CN-A641-01A
0 years, male, white, stage:Stage IVA, alive, 367 days
19.6
TCGA-CN-5367-01A
0 years, female, white, stage:Stage IVA, dead, 352 days
19.5
TCGA-CN-6011-01A
0 years, male, white, stage:Stage IVA, alive, 933 days
19.5
TCGA-CN-6988-01A
0 years, male, white, stage:Stage IVA, alive, 318 days
19.4
TCGA-T2-A6X0-01A
0 years, male, white, stage:'--, alive, 216 days
19.4
TCGA-CV-7430-01A
0 years, male, white, stage:Stage IVA, dead, 495 days
19.3
TCGA-CV-6940-01A
0 years, female, white, stage:Stage III, dead, 804 days
19.2
TCGA-CN-A497-01A
0 years, male, stage:Stage III, alive, 1065 days
19.1
TCGA-CN-5355-01A
0 years, male, black or african american, stage:Stage IVA, alive, 1278 days
19.1
TCGA-CN-A63U-01A
0 years, male, white, stage:Stage IVA, alive, 964 days
19.0
TCGA-HL-7533-01A
0 years, male, white, stage:'--, alive, 1057 days
18.9
TCGA-CR-6473-01A
0 years, male, white, stage:'--, alive, 1125 days
18.9
TCGA-CV-7406-01A
0 years, male, white, stage:Stage II, dead, 1748 days
18.9
TCGA-CV-7247-01A
0 years, male, white, stage:Stage III, dead, 577 days
18.8
TCGA-F7-7848-01A
0 years, male, white, stage:Stage IVA, alive, 1131 days
18.7
TCGA-CV-7418-01A
0 years, male, black or african american, stage:Stage IVA, dead, 789 days
18.6
TCGA-D6-6827-01A
0 years, female, white, stage:Stage I, alive, 568 days
18.6
TCGA-UF-A71D-01A
0 years, female, white, stage:Stage IVA, alive, 1461 days
18.5
TCGA-CN-4741-01A
0 years, male, white, stage:Stage IVA, alive, 2239 days
18.4
TCGA-BA-6873-01A
0 years, male, white, stage:Stage IVA, alive, 122 days
18.4
TCGA-CV-5441-01A
0 years, male, white, stage:Stage IVA, alive, 2886 days
18.2
TCGA-CR-5250-01A
0 years, male, white, stage:'--, alive, 799 days
18.0
TCGA-CV-7446-01A
0 years, male, white, stage:Stage IVA, dead, 1093 days
18.0
TCGA-CR-7385-01A
0 years, male, white, stage:'--, alive, 997 days
17.9
TCGA-CR-5243-01A
0 years, male, white, stage:'--, alive, 2562 days
17.9
TCGA-QK-A6IF-01A
0 years, male, white, stage:'--, alive, 704 days
17.9
TCGA-CV-7440-01A
0 years, male, white, stage:Stage II, dead, 675 days
17.8
TCGA-D6-A6EO-01A
0 years, male, white, stage:Stage IVA, alive, 759 days
17.8
TCGA-CR-7399-01A
0 years, female, white, stage:Stage IVA, alive, 181 days
17.8
TCGA-BA-5559-01A
0 years, male, white, stage:'--, dead, 2083 days
17.7
TCGA-IQ-A6SG-01A
0 years, female, white, stage:Stage III, alive, 579 days
17.7
TCGA-DQ-5631-01A
0 years, male, white, stage:'--, dead, 548 days
17.6
TCGA-HD-8635-01A
0 years, female, white, stage:Stage III, alive, 695 days
17.5
TCGA-BB-A5HU-01A
0 years, male, white, stage:Stage IVA, alive, 782 days
17.4
TCGA-CN-6020-01A
0 years, male, black or african american, stage:Stage III, dead, 205 days
17.4
TCGA-CX-7219-01A
0 years, male, black or african american, stage:Stage IVA, alive, 1045 days
17.3
TCGA-CN-4729-01A
0 years, male, white, stage:Stage III, alive, 392 days
17.3
TCGA-CN-A499-01A
0 years, female, white, stage:Stage II, alive, 717 days
17.2
TCGA-CV-6950-01A
0 years, male, white, stage:Stage IVA, dead, 459 days
17.1
TCGA-CV-7245-01A
0 years, male, white, stage:Stage IVA, alive, 797 days
17.1
TCGA-BA-A4IF-01A
0 years, male, white, stage:'--, alive, 895 days
17.1
TCGA-CR-7380-01A
0 years, male, white, stage:Stage IVB, dead, 606 days
17.0
TCGA-P3-A6T7-01A
0 years, male, white, stage:Stage IVA, dead, 487 days
16.9
TCGA-CN-6996-01A
0 years, female, white, stage:Stage IVA, dead, 530 days
16.9
TCGA-CN-5370-01A
0 years, male, white, stage:Stage III, dead, 259 days
16.9
TCGA-CR-6467-01A
0 years, male, white, stage:Stage III, alive, 1777 days
16.9
TCGA-CN-6995-01A
0 years, male, white, stage:Stage IVA, dead, 112 days
16.8
TCGA-CV-7102-01A
0 years, female, white, stage:Stage IVA, dead, 56 days
16.8
TCGA-CV-7428-01A
0 years, male, white, stage:Stage IVA, dead, 1671 days
16.8
TCGA-CN-A6V7-01A
0 years, male, white, stage:Stage IVA, alive, 594 days
16.7
TCGA-CV-7407-01A
0 years, female, white, stage:Stage II, dead, 1081 days
16.6
TCGA-HD-8224-01A
0 years, male, white, stage:Stage IVA, dead, 446 days
16.5
TCGA-CV-6945-01A
0 years, male, white, stage:Stage IVA, dead, 366 days
16.5
TCGA-DQ-7592-01A
0 years, male, american indian or alaska native, stage:'--, alive, 1143 days
16.5
TCGA-CR-7393-01A
0 years, male, white, stage:Stage III, alive, 993 days
16.4
TCGA-CV-7434-01A
0 years, male, white, stage:Stage IVA, dead, 218 days
16.3
TCGA-HD-A4C1-01A
0 years, female, black or african american, stage:Stage IVA, alive, 11 days
16.3
TCGA-CN-6021-01A
0 years, female, white, stage:'--, dead, 276 days
16.3
TCGA-IQ-7630-01A
0 years, male, white, stage:Stage II, alive, 485 days
16.3
TCGA-CQ-6228-01A
0 years, female, white, stage:Stage IVA, dead, 456 days
16.2
TCGA-CV-7095-01A
0 years, female, stage:Stage II, dead, 572 days
16.2
TCGA-CV-7433-01A
0 years, male, white, stage:Stage IVA, dead, 601 days
16.2
TCGA-CR-6470-01A
0 years, male, white, stage:Stage II, alive, 1521 days
16.2
TCGA-CV-7410-01A
0 years, male, white, stage:Stage III, dead, 6417 days
16.1
TCGA-CR-7372-01A
0 years, male, white, stage:Stage I, alive, 759 days
16.1
TCGA-CR-5249-01A
0 years, female, white, stage:Stage II, alive, 1152 days
16.1
TCGA-CQ-5334-01A
0 years, male, white, stage:Stage IVA, dead, 129 days
16.0
TCGA-CR-7376-01A
0 years, male, white, stage:Stage III, alive, 972 days
16.0
TCGA-BB-4217-01A
0 years, male, black or african american, stage:Stage IVA, alive, 187 days
16.0
TCGA-CV-7178-01A
0 years, female, white, stage:Stage IVA, dead, 2166 days
16.0
TCGA-CR-6493-01A
0 years, male, black or african american, stage:Stage IVA, dead, 282 days
16.0
TCGA-CN-5366-01A
0 years, male, white, stage:Stage IVA, dead, 360 days
15.9
TCGA-BA-A4II-01A
0 years, male, white, stage:Stage II, alive, 918 days
15.9
TCGA-QK-A64Z-01A
0 years, female, white, stage:Stage IVA, dead, 641 days
15.9
TCGA-BB-A6UM-01A
0 years, male, white, stage:Stage III, alive, 393 days
15.9
TCGA-CQ-A4CB-01A
0 years, male, stage:Stage III, alive, 893 days
15.9
TCGA-CN-4737-01A
0 years, male, white, stage:Stage IVA, alive, 625 days
15.9
TCGA-D6-6515-01A
0 years, female, white, stage:Stage II, dead, 403 days
15.8
TCGA-CV-6936-01A
0 years, male, white, stage:Stage IVA, dead, 166 days
15.8
TCGA-CV-6433-01A
0 years, male, white, stage:Stage II, alive, 641 days
15.7
TCGA-CR-6471-01A
0 years, male, white, stage:Stage IVA, dead, 1202 days
15.7
TCGA-BA-A4IG-01A
0 years, male, white, stage:'--, alive, 855 days
15.7
TCGA-CV-5436-01A
0 years, male, stage:Stage IVA, dead, 584 days
15.7
TCGA-IQ-A61J-01A
0 years, male, white, stage:Stage IVA, alive, 1021 days
15.6
TCGA-F7-A623-01A
0 years, male, white, stage:Stage IVA, alive, 616 days
15.6
TCGA-BA-5556-01A
0 years, female, white, stage:Stage II, alive, 725 days
15.6
TCGA-CQ-7068-01A
0 years, female, white, stage:Stage II, alive, 1309 days
15.6
TCGA-CR-6482-01A
0 years, male, black or african american, stage:'--, alive, 345 days
15.5
TCGA-CR-7370-01A
0 years, female, white, stage:'--, alive, 105 days
15.5
TCGA-CV-7104-01A
0 years, female, white, stage:Stage IVA, dead, 393 days
15.4
TCGA-CN-5369-01A
0 years, female, white, stage:Stage IVA, dead, 1 days
15.4
TCGA-CN-6992-01A
0 years, male, white, stage:Stage IVA, alive, 1066 days
15.2
TCGA-CV-A460-01A
0 years, male, white, stage:'--, dead, 1838 days
15.2
TCGA-CV-6941-01A
0 years, male, white, stage:Stage III, dead, 342 days
15.2
TCGA-CR-7377-01A
0 years, male, white, stage:Stage IVA, dead, 279 days
15.2
TCGA-D6-8568-01A
0 years, male, white, stage:Stage II, alive, 759 days
15.1
TCGA-BA-A6DE-01A
0 years, female, white, stage:Stage II, alive, 440 days
14.9
TCGA-D6-6824-01A
0 years, male, white, stage:Stage IVA, alive, 77 days
14.8
TCGA-CQ-A4CG-01A
0 years, female, white, stage:Stage III, dead, 430 days
14.8
TCGA-QK-A8ZB-01A
0 years, male, black or african american, stage:Stage IVA, alive, 542 days
14.8
TCGA-CN-A49A-01A
0 years, male, white, stage:Stage IVB, dead, 526 days
14.8
TCGA-BB-4225-01A
0 years, male, white, stage:'--, alive, 146 days
14.8
TCGA-CV-7091-01A
0 years, male, white, stage:Stage I, alive, 3381 days
14.8
TCGA-CQ-7069-01A
0 years, female, white, stage:Stage II, alive, 1274 days
14.7
TCGA-CQ-7063-01A
0 years, female, white, stage:Stage I, alive, 2133 days
14.6
TCGA-CV-7413-01A
0 years, female, white, stage:Stage II, dead, 294 days
14.6
TCGA-CR-6492-01A
0 years, male, white, stage:Stage III, alive, 479 days
14.6
TCGA-D6-6826-01A
0 years, female, white, stage:Stage IVA, dead, 348 days
14.6
TCGA-CN-6997-01A
0 years, male, white, stage:Stage IVA, dead, 988 days
14.6
TCGA-BB-4223-01A
0 years, male, white, stage:Stage IVA, alive, 3221 days
14.5
TCGA-CV-A461-01A
0 years, male, white, stage:'--, dead, 2064 days
14.5
TCGA-CR-7371-01A
0 years, female, white, stage:Stage III, dead, 94 days
14.4
TCGA-CV-5966-01A
0 years, female, white, stage:Stage IVA, dead, 545 days
14.4
TCGA-CV-7427-01A
0 years, female, white, stage:Stage II, dead, 4760 days
14.4
TCGA-CV-7255-01A
0 years, female, white, stage:Stage IVA, dead, 64 days
14.3
TCGA-CV-7438-01A
0 years, female, white, stage:Stage I, dead, 194 days
14.3
TCGA-DQ-7588-01A
0 years, male, white, stage:'--, dead, 427 days
14.3
TCGA-BB-4224-01A
0 years, male, white, stage:Stage IVA, alive, 278 days
14.3
TCGA-BB-8596-01A
0 years, female, white, stage:Stage IVA, alive, 2161 days
14.2
TCGA-CN-A63W-01A
0 years, female, white, stage:Stage IVA, dead, 377 days
14.2
TCGA-BA-A4IH-01A
0 years, male, white, stage:'--, alive, 622 days
14.2
TCGA-BA-A6DI-01A
0 years, male, black or african american, stage:'--, dead, 336 days
14.1
TCGA-BA-A8YP-01A
0 years, male, black or african american, stage:Stage IVB, alive, 499 days
14.1
TCGA-CV-6952-01A
0 years, female, white, stage:Stage IVA, dead, 185 days
14.0
TCGA-CN-6024-01A
0 years, male, white, stage:Stage IVA, dead, 337 days
14.0
TCGA-UF-A7JC-01A
0 years, male, white, stage:Stage IVA, dead, 546 days
14.0
TCGA-CV-7423-01A
0 years, male, white, stage:Stage II, dead, 3059 days
13.9
TCGA-CV-5442-01A
0 years, female, white, stage:Stage IVA, alive, 2327 days
13.9
TCGA-BA-5151-01A
0 years, male, white, stage:Stage IVA, alive, 722 days
13.9
TCGA-CV-7177-01A
0 years, female, white, stage:Stage II, dead, 663 days
13.9
TCGA-CN-6010-01A
0 years, male, white, stage:Stage IVA, alive, 1523 days
13.9
TCGA-CQ-6227-01A
0 years, male, white, stage:Stage IVA, dead, 129 days
13.9
TCGA-BA-A6DL-01A
0 years, male, white, stage:'--, alive, 623 days
13.8
TCGA-CV-6943-01A
0 years, male, white, stage:Stage III, dead, 602 days
13.8
TCGA-D6-6517-01A
0 years, male, white, stage:Stage III, alive, 292 days
13.7
TCGA-CR-7395-01A
0 years, female, white, stage:Stage II, alive, 930 days
13.7
TCGA-F7-A61W-01A
0 years, male, asian, stage:Stage IVA, alive, 14 days
13.7
TCGA-P3-A6T4-01A
0 years, male, white, stage:Stage IVA, dead, 62 days
13.7
TCGA-CN-4725-01A
0 years, male, white, stage:Stage II, alive, 1157 days
13.7
TCGA-HD-7753-01A
0 years, male, black or african american, stage:Stage I, alive, 866 days
13.6
TCGA-CN-A498-01A
0 years, female, white, stage:Stage III, dead, 773 days
13.6
TCGA-T2-A6X2-01A
0 years, male, white, stage:Stage III, alive, 987 days
13.6
TCGA-P3-A6T8-01A
0 years, male, white, stage:Stage IVA, alive, 400 days
13.6
TCGA-CV-7261-01A
0 years, male, white, stage:Stage IVA, alive, 1512 days
13.6
TCGA-CN-4735-01A
0 years, male, white, stage:Stage IVA, alive, 1737 days
13.6
TCGA-CR-7369-01A
0 years, male, white, stage:Stage IVA, dead, 1090 days
13.5
TCGA-CV-7252-01A
0 years, female, black or african american, stage:Stage IVA, dead, 151 days
13.5
TCGA-CV-5978-01A
0 years, female, black or african american, stage:Stage IVB, dead, 215 days
13.5
TCGA-UF-A7JO-01A
0 years, female, white, stage:Stage IVA, dead, 631 days
13.5
TCGA-CN-4727-01A
0 years, male, white, stage:Stage IVA, alive, 1560 days
13.5
TCGA-CR-5248-01A
0 years, male, white, stage:'--, alive, 1663 days
13.4
TCGA-CQ-7072-01A
0 years, male, white, stage:Stage II, alive, 2359 days
13.4
TCGA-CV-A6JZ-01A
0 years, male, white, stage:Stage II, alive, 714 days
13.3
TCGA-CV-7090-01A
0 years, male, white, stage:Stage II, alive, 5252 days
13.3
TCGA-C9-A480-01A
0 years, female, asian, stage:Stage III, alive, 386 days
13.3
TCGA-CV-7099-01A
0 years, female, white, stage:Stage II, dead, 243 days
13.2
TCGA-CR-6481-01A
0 years, male, white, stage:'--, alive, 311 days
13.2
TCGA-CR-6487-01A
0 years, male, white, stage:Stage I, alive, 234 days
13.2
TCGA-CQ-5324-01A
0 years, male, white, stage:Stage III, alive, 1593 days
13.1
TCGA-P3-A6T0-01A
0 years, female, white, stage:Stage IVA, alive, 578 days
13.1
TCGA-CV-7568-01A
0 years, female, white, stage:Stage IVA, dead, 927 days
13.0
TCGA-CX-7082-01A
0 years, male, white, stage:Stage IVA, dead, 11 days
13.0
TCGA-QK-A652-01A
0 years, male, white, stage:Stage III, alive, 645 days
13.0
TCGA-F7-8298-01A
0 years, male, white, stage:Stage I, alive, 995 days
13.0
TCGA-UF-A719-01A
0 years, male, stage:Stage II, alive, 1663 days
12.9
TCGA-CQ-5323-01A
0 years, male, white, stage:Stage I, alive, 1466 days
12.9
TCGA-CV-5970-01A
0 years, male, white, stage:Stage IVA, dead, 406 days
12.9
TCGA-CN-A642-01A
0 years, male, white, stage:Stage IVB, dead, 82 days
12.8
TCGA-CR-6477-01A
0 years, female, white, stage:'--, alive, 514 days
12.8
TCGA-CV-6933-01A
0 years, male, white, stage:Stage III, dead, 2741 days
12.8
TCGA-CQ-A4CD-01A
0 years, male, white, stage:Stage IVA, alive, 1022 days
12.7
TCGA-CN-6018-01A
0 years, female, white, stage:Stage IVA, dead, 580 days
12.6
TCGA-CN-A6V6-01A
0 years, male, white, stage:Stage IVA, alive, 635 days
12.5
TCGA-CR-7365-01A
0 years, male, white, stage:Stage IVA, alive, 1191 days
12.5
TCGA-CN-5359-01A
0 years, male, white, stage:Stage IVA, dead, 377 days
12.4
TCGA-BA-A6DJ-01A
0 years, male, asian, stage:Stage IVA, dead, 407 days
12.4
TCGA-CN-5363-01A
0 years, male, black or african american, stage:Stage IVB, dead, 253 days
12.4
TCGA-CN-4734-01A
0 years, male, white, stage:Stage II, alive, 1690 days
12.4
TCGA-CV-7103-01A
0 years, male, white, stage:Stage IVA, dead, 1591 days
12.4
TCGA-CV-A45Z-01A
0 years, male, white, stage:'--, dead, 1466 days
12.4
TCGA-CR-7367-01A
0 years, male, white, stage:Stage IVA, alive, 1440 days
12.3
TCGA-CV-6935-01A
0 years, male, white, stage:Stage IVA, dead, 295 days
12.3
TCGA-CN-4730-01A
0 years, male, white, stage:Stage IVA, alive, 817 days
12.3
TCGA-BB-A5HZ-01A
0 years, male, white, stage:Stage IVA, alive, 827 days
12.2
TCGA-CN-5373-01A
0 years, female, white, stage:Stage I, alive, 1584 days
12.2
TCGA-BA-6871-01A
0 years, male, white, stage:'--, dead, 108 days
12.2
TCGA-CQ-6225-01A
0 years, male, white, stage:Stage III, dead, 403 days
12.2
TCGA-BB-4228-01A
0 years, male, white, stage:Stage III, alive, 559 days
12.2
TCGA-CQ-5330-01A
0 years, female, white, stage:Stage IVA, alive, 1897 days
12.2
TCGA-CN-6012-01A
0 years, male, white, stage:Stage IVA, alive, 1460 days
12.1
TCGA-QK-AA3J-01A
0 years, male, black or african american, stage:Stage I, alive, 466 days
12.1
TCGA-CR-7394-01A
0 years, male, white, stage:Stage IVA, alive, 1346 days
12.1
TCGA-QK-A8Z7-01A
0 years, male, black or african american, stage:Stage IVA, alive, 392 days
12.0
TCGA-CV-5444-01A
0 years, male, black or african american, stage:Stage IVA, alive, 2437 days
12.0
TCGA-CV-7097-01A
0 years, male, white, stage:Stage II, dead, 385 days
11.9
TCGA-CN-5365-01A
0 years, male, white, stage:Stage IVB, dead, 351 days
11.9
TCGA-CV-7089-01A
0 years, male, white, stage:Stage IVA, dead, 1972 days
11.9
TCGA-UF-A7JH-01A
0 years, male, black or african american, stage:Stage IVA, alive, 896 days
11.9
TCGA-CV-5976-01A
0 years, male, white, stage:Stage IVA, alive, 1478 days
11.9
TCGA-CN-4731-01A
0 years, female, white, stage:Stage IVA, dead, 998 days
11.9
TCGA-KU-A66T-01A
0 years, female, white, stage:Stage IVA, alive, 552 days
11.8
TCGA-CV-7238-01A
0 years, female, white, stage:Stage II, alive, 2727 days
11.8
TCGA-DQ-5629-01A
0 years, male, white, stage:'--, dead, 941 days
11.8
TCGA-CV-6951-01A
0 years, male, white, stage:Stage IVA, dead, 915 days
11.7
TCGA-CR-6488-01A
0 years, female, white, stage:Stage II, alive, 379 days
11.7
TCGA-C9-A47Z-01A
0 years, female, asian, stage:Stage III, dead, 191 days
11.6
TCGA-CV-5432-01A
0 years, male, white, stage:Stage III, alive, 3930 days
11.6
TCGA-CN-A49C-01A
0 years, male, white, stage:'--, alive, 645 days
11.6
TCGA-CN-6022-01A
0 years, male, white, stage:Stage IVA, dead, 281 days
11.6
TCGA-CN-4738-01A
0 years, male, white, stage:Stage IVA, dead, 436 days
11.6
TCGA-CN-6994-01A
0 years, male, white, stage:Stage IVA, alive, 1183 days
11.5
TCGA-BA-A6DG-01A
0 years, male, white, stage:'--, dead, 69 days
11.5
TCGA-CN-6023-01A
0 years, male, white, stage:Stage IVA, alive, 1584 days
11.5
TCGA-CN-5361-01A
0 years, male, white, stage:Stage IVA, dead, 2120 days
11.5
TCGA-UF-A718-01A
0 years, male, white, stage:Stage IVA, alive, 1971 days
11.5
TCGA-DQ-5625-01A
0 years, female, white, stage:'--, dead, 1133 days
11.5
TCGA-P3-A6T6-01A
0 years, male, white, stage:Stage IVA, dead, 395 days
11.4
TCGA-CV-7421-01A
0 years, male, white, stage:Stage IVA, dead, 2 days
11.4
TCGA-CN-6013-01A
0 years, male, white, stage:Stage IVA, dead, 727 days
11.4
TCGA-CV-6962-01A
0 years, male, white, stage:Stage IVA, dead, 126 days
11.4
TCGA-CV-6948-01A
0 years, female, white, stage:Stage IVB, dead, 1289 days
11.4
TCGA-UF-A7J9-01A
0 years, male, white, stage:Stage IVA, alive, 1358 days
11.4
TCGA-CR-7379-01A
0 years, female, white, stage:Stage IVA, alive, 1036 days
11.3
TCGA-IQ-7632-01A
0 years, female, white, stage:Stage IVA, alive, 441 days
11.3
TCGA-T3-A92N-01A
0 years, male, black or african american, stage:Stage IVA, dead, 95 days
11.3
TCGA-CV-7424-01A
0 years, male, asian, stage:Stage IVA, dead, 453 days
11.3
TCGA-CN-4739-01A
0 years, male, white, stage:Stage IVA, dead, 1394 days
11.3
TCGA-CQ-5331-01A
0 years, female, white, stage:'--, alive, 1399 days
11.3
TCGA-CV-A463-01A
0 years, female, white, stage:Stage IVA, dead, 23 days
11.2
TCGA-CV-A464-01A
0 years, male, white, stage:Stage III, alive, 1722 days
11.2
TCGA-T3-A92M-01A
0 years, male, black or african american, stage:Stage IVA, alive, 417 days
11.2
TCGA-HD-8634-01A
0 years, female, white, stage:Stage I, dead, 385 days
11.2
TCGA-CR-7392-01A
0 years, female, white, stage:Stage IVA, alive, 1425 days
11.2
TCGA-HD-A6HZ-01A
0 years, female, white, stage:Stage III, alive, 111 days
11.2
TCGA-CQ-A4CH-01A
0 years, male, asian, stage:Stage II, dead, 379 days
11.2
TCGA-CQ-6219-01A
0 years, female, white, stage:Stage IVA, dead, 479 days
11.2
TCGA-CV-6441-01A
0 years, male, white, stage:Stage III, dead, 292 days
11.1
TCGA-D6-6516-01A
0 years, male, white, stage:Stage I, alive, 773 days
11.1
TCGA-UP-A6WW-01A
0 years, male, white, stage:'--, alive, 518 days
11.1
TCGA-CV-A45R-01A
0 years, male, white, stage:Stage III, alive, 5480 days
11.1
TCGA-CQ-6221-01A
0 years, male, white, stage:'--, alive, 1000 days
11.1
TCGA-CV-5431-01A
0 years, male, white, stage:Stage IVA, dead, 522 days
11.0
TCGA-CN-6998-01A
0 years, male, white, stage:Stage IVA, dead, 357 days
11.0
TCGA-KU-A6H7-01A
0 years, female, white, stage:Stage IVA, alive, 586 days
11.0
TCGA-UF-A7JA-01A
0 years, female, white, stage:Stage IVA, alive, 2265 days
11.0
TCGA-CN-4728-01A
0 years, male, white, stage:Stage IVA, alive, 1724 days
10.9
TCGA-CR-6474-01A
0 years, male, white, stage:Stage IVA, dead, 564 days
10.9
TCGA-BA-6872-01A
0 years, male, white, stage:'--, dead, 384 days
10.9
TCGA-CV-7435-01A
0 years, female, white, stage:Stage IVA, dead, 4680 days
10.9
TCGA-CV-7422-01A
0 years, female, white, stage:Stage IVA, dead, 1037 days
10.9
TCGA-CV-7416-01A
0 years, female, white, stage:Stage IVA, dead, 763 days
10.9
TCGA-CV-6942-01A
0 years, female, white, stage:Stage II, alive, 4282 days
10.9
TCGA-P3-A5QF-01A
0 years, male, white, stage:Stage IVA, dead, 330 days
10.8
TCGA-IQ-A61E-01A
0 years, female, white, stage:Stage III, alive, 1147 days
10.8
TCGA-WA-A7H4-01A
0 years, male, white, stage:Stage II, alive, 443 days
10.8
TCGA-CV-5440-01A
0 years, male, white, stage:Stage IVA, alive, 3270 days
10.7
TCGA-F7-8489-01A
0 years, male, white, stage:Stage II, alive, 658 days
10.7
TCGA-CV-6954-01A
0 years, male, black or african american, stage:Stage IVA, dead, 2002 days
10.7
TCGA-CN-5358-01A
0 years, male, white, stage:Stage II, dead, 261 days
10.7
TCGA-RS-A6TO-01A
0 years, female, white, stage:Stage IVA, dead, 387 days
10.7
TCGA-CR-6484-01A
0 years, female, asian, stage:Stage IVA, alive, 354 days
10.7
TCGA-CV-A45U-01A
0 years, male, white, stage:Stage IVA, dead, 1079 days
10.7
TCGA-CR-6491-01A
0 years, male, black or african american, stage:Stage IVA, alive, 693 days
10.6
TCGA-CQ-A4CI-01A
0 years, male, white, stage:Stage III, alive, 950 days
10.6
TCGA-D6-A4Z9-01A
0 years, male, white, stage:Stage IVA, alive, 539 days
10.6
TCGA-CQ-6224-01A
0 years, male, white, stage:Stage IVA, alive, 1721 days
10.6
TCGA-CV-6959-01A
0 years, male, white, stage:Stage III, dead, 256 days
10.6
TCGA-CV-A45V-01A
0 years, female, white, stage:Stage IVA, dead, 32 days
10.6
TCGA-CN-4740-01A
0 years, female, white, stage:Stage IVA, dead, 839 days
10.6
TCGA-CV-5977-01A
0 years, male, white, stage:Stage IVA, alive, 1840 days
10.5
TCGA-CQ-A4C7-01A
0 years, male, white, stage:Stage III, dead, 353 days
10.5
TCGA-CV-6960-01A
0 years, male, black or african american, stage:Stage III, dead, 862 days
10.5
TCGA-CR-7397-01A
0 years, male, white, stage:Stage IVA, alive, 754 days
10.4
TCGA-P3-A6SW-01A
0 years, male, white, stage:Stage IVB, alive, 1120 days
10.4
TCGA-T2-A6WX-01A
0 years, female, white, stage:'--, dead, 209 days
10.4
TCGA-BB-A5HY-01A
0 years, male, white, stage:Stage IVA, dead, 321 days
10.4
TCGA-CX-7085-01A
0 years, female, white, stage:Stage I, alive, 321 days
10.3
TCGA-CQ-6218-01A
0 years, female, white, stage:Stage IVA, alive, 1253 days
10.3
TCGA-CV-7415-01A
0 years, male, white, stage:Stage IVA, dead, 695 days
10.2
TCGA-HD-7831-01A
0 years, male, white, stage:Stage IVA, alive, 667 days
10.2
TCGA-BA-6869-01A
0 years, male, white, stage:Stage III, alive, 644 days
10.2
TCGA-CN-4736-01A
0 years, female, white, stage:'--, dead, 395 days
10.2
TCGA-KU-A66S-01A
0 years, female, white, stage:Stage III, dead, 406 days
10.1
TCGA-CQ-6229-01A
0 years, male, white, stage:Stage II, alive, 1179 days
10.1
TCGA-CV-6955-01A
0 years, female, white, stage:Stage II, dead, 334 days
10.1
TCGA-HD-7229-01A
0 years, male, white, stage:Stage IVA, alive, 1027 days
10.1
TCGA-D6-A74Q-01A
0 years, male, white, stage:Stage IVA, alive, 710 days
10.1
TCGA-D6-6825-01A
0 years, male, white, stage:Stage I, alive, 491 days
10.1
TCGA-MT-A51W-01A
0 years, female, white, stage:Stage I, alive, 437 days
10.1
TCGA-TN-A7HJ-01A
0 years, male, white, stage:Stage IVA, alive, 403 days
10.1
TCGA-CV-A6JY-01A
0 years, male, white, stage:Stage IVA, alive, 646 days
10.1
TCGA-UF-A7JT-01A
0 years, female, white, stage:Stage IVA, dead, 993 days
10.0
TCGA-CQ-A4CE-01A
0 years, female, stage:Stage II, alive, 897 days
10.0
TCGA-CR-7391-01A
0 years, female, white, stage:Stage I, alive, 913 days
10.0
TCGA-IQ-A61H-01A
0 years, male, white, stage:Stage II, alive, 1138 days
10.0
TCGA-CR-7388-01A
0 years, female, white, stage:'--, dead, 823 days
10.0
TCGA-UF-A7JD-01A
0 years, male, stage:Stage IVA, dead, 739 days
10.0
TCGA-CN-4742-01A
0 years, female, white, stage:Stage IVA, dead, 397 days
10.0
TCGA-CV-5971-01A
0 years, male, white, stage:Stage IVA, alive, 701 days
9.9
TCGA-UF-A71E-01A
0 years, male, white, stage:Stage IVA, dead, 1504 days
9.9
TCGA-CR-7401-01A
0 years, male, white, stage:Stage I, alive, 1077 days
9.9
TCGA-UF-A7JV-01A
0 years, female, white, stage:Stage IVA, dead, 90 days
9.9
TCGA-CQ-5326-01A
0 years, male, white, stage:Stage IVA, dead, 89 days
9.9
TCGA-CV-6938-01A
0 years, male, white, stage:Stage II, dead, 144 days
9.9
TCGA-CV-A468-01A
0 years, male, stage:Stage IVA, dead, 464 days
9.8
TCGA-CV-7263-01A
0 years, male, black or african american, stage:Stage II, dead, 560 days
9.7
TCGA-CV-7429-01A
0 years, male, white, stage:Stage IVA, dead, 107 days
9.7
TCGA-H7-8502-01A
0 years, male, white, stage:Stage IVA, alive, 458 days
9.7
TCGA-CV-6953-01A
0 years, female, white, stage:Stage III, dead, 1641 days
9.7
TCGA-CV-7242-01A
0 years, female, white, stage:Stage II, alive, 1095 days
9.7
TCGA-CV-A45P-01A
0 years, female, white, stage:Stage I, alive, 639 days
9.7
TCGA-CV-7411-01A
0 years, female, white, stage:Stage IVA, dead, 2717 days
9.7
TCGA-CN-6016-01A
0 years, male, white, stage:Stage IVA, alive, 1443 days
9.7
TCGA-CV-7432-01A
0 years, male, white, stage:Stage II, dead, 2570 days
9.6
TCGA-CN-4723-01A
0 years, male, white, stage:Stage IVA, alive, 1699 days
9.6
TCGA-F7-A50I-01A
0 years, male, white, stage:Stage IVA, alive, 92 days
9.5
TCGA-CV-6934-01A
0 years, female, white, stage:Stage IVA, dead, 65 days
9.5
TCGA-CN-A6V3-01A
0 years, male, white, stage:Stage IVA, alive, 742 days
9.5
TCGA-QK-A6VC-01A
0 years, female, black or african american, stage:Stage IVA, alive, 600 days
9.5
TCGA-CR-7383-01A
0 years, female, white, stage:Stage I, dead, 521 days
9.5
TCGA-CN-5374-01A
0 years, female, white, stage:Stage IVA, dead, 1732 days
9.4
TCGA-CV-7101-01A
0 years, male, white, stage:Stage II, dead, 160 days
9.4
TCGA-P3-A5QA-01A
0 years, male, stage:Stage I, alive, 2182 days
9.3
TCGA-MT-A67D-01A
0 years, male, white, stage:Stage II, alive, 56 days
9.3
TCGA-P3-A6SX-01A
0 years, male, white, stage:Stage III, dead, 1430 days
9.3
TCGA-CR-7389-01A
0 years, male, black or african american, stage:'--, alive, 392 days
9.1
TCGA-HD-A634-01A
0 years, male, white, stage:Stage IVA, dead, 130 days
9.1
TCGA-BA-4076-01A
0 years, male, white, stage:'--, dead, 415 days
9.1
TCGA-CX-7086-01A
0 years, male, black or african american, stage:Stage III, alive, 573 days
9.1
TCGA-CV-7180-01A
0 years, male, white, stage:Stage II, dead, 327 days
9.1
TCGA-KU-A6H8-01A
0 years, male, white, stage:Stage IVA, dead, 327 days
9.0
TCGA-CQ-6220-01A
0 years, male, white, stage:Stage III, dead, 985 days
9.0
TCGA-CV-6003-01A
0 years, female, white, stage:Stage III, alive, 1665 days
9.0
TCGA-CQ-7071-01A
0 years, female, white, stage:Stage III, alive, 1311 days
8.9
TCGA-CV-5439-01A
0 years, male, white, stage:Stage IVA, dead, 546 days
8.9
TCGA-CV-7235-01A
0 years, male, white, stage:Stage II, alive, 2347 days
8.8
TCGA-BA-5557-01A
0 years, female, stage:Stage III, alive, 623 days
8.8
TCGA-DQ-5624-01A
0 years, female, white, stage:'--, alive, 1778 days
8.8
TCGA-MZ-A6I9-01A
0 years, male, white, stage:'--, dead, 489 days
8.8
TCGA-CR-7386-01A
0 years, male, white, stage:Stage IVA, alive, 1430 days
8.8
TCGA-CQ-A4C9-01A
0 years, male, stage:Stage III, alive, 707 days
8.8
TCGA-CV-7254-01A
0 years, male, white, stage:Stage II, dead, 1459 days
8.7
TCGA-UF-A71B-01A
0 years, male, white, stage:Stage IVA, alive, 1506 days
8.7
TCGA-UF-A7JK-01A
0 years, male, stage:Stage IVA, dead, 424 days
8.7
TCGA-CV-A465-01A
0 years, male, white, stage:Stage III, dead, 215 days
8.6
TCGA-CX-A4AQ-01A
0 years, male, white, stage:Stage IVA, alive, 1555 days
8.6
TCGA-F7-A61S-01A
0 years, male, white, stage:Stage III, alive, 576 days
8.6
TCGA-CV-6937-01A
0 years, male, white, stage:Stage II, dead, 624 days
8.6
TCGA-CQ-6222-01A
0 years, male, white, stage:Stage IVA, alive, 2016 days
8.5
TCGA-H7-7774-01A
0 years, female, white, stage:Stage IVA, alive, 407 days
8.5
TCGA-CN-6017-01A
0 years, male, white, stage:Stage IVA, dead, 853 days
8.4
TCGA-BB-A6UO-01A
0 years, female, white, stage:Stage IVA, dead, 268 days
8.4
TCGA-CV-7183-01A
0 years, male, white, stage:Stage II, alive, 3981 days
8.3
TCGA-CV-A45Y-01A
0 years, male, american indian or alaska native, stage:Stage IVA, dead, 2703 days
8.3
TCGA-MT-A51X-01A
0 years, male, white, stage:Stage IVA, alive, 242 days
8.3
TCGA-BB-4227-01A
0 years, male, white, stage:Stage IVA, alive, 134 days
8.3
TCGA-CQ-5327-01A
0 years, female, asian, stage:Stage IVA, alive, 1660 days
8.3
TCGA-F7-A620-01A
0 years, male, white, stage:Stage III, alive, 543 days
8.3
TCGA-CV-7248-01A
0 years, female, black or african american, stage:Stage IVA, dead, 521 days
8.3
TCGA-MT-A67F-01A
0 years, female, white, stage:Stage IVA, alive, 384 days
8.3
TCGA-MZ-A5BI-01A
0 years, male, white, stage:'--, dead, 217 days
8.2
TCGA-CQ-5329-01A
0 years, female, white, stage:Stage II, alive, 2143 days
8.1
TCGA-CV-7437-01A
0 years, male, stage:Stage II, dead, 506 days
8.1
TCGA-CN-A63T-01A
0 years, male, white, stage:Stage IVA, alive, 225 days
8.1
TCGA-F7-A50G-01A
0 years, male, white, stage:Stage III, alive, 616 days
8.0
TCGA-QK-A8ZA-01A
0 years, male, black or african american, stage:'--, dead, 371 days
8.0
TCGA-P3-A6T3-01A
0 years, male, white, stage:Stage IVA, dead, 577 days
8.0
TCGA-P3-A6T2-01A
0 years, male, white, stage:Stage IVA, alive, 2298 days
7.9
TCGA-CV-A45X-01A
0 years, male, white, stage:Stage IVA, dead, 198 days
7.9
TCGA-H7-A6C4-01A
0 years, female, white, stage:Stage IVA, dead, 414 days
7.9
TCGA-BA-A6DB-01A
0 years, female, white, stage:Stage I, alive, 216 days
7.9
TCGA-CV-A6JD-01A
0 years, female, white, stage:'--, dead, 182 days
7.8
TCGA-CQ-5325-01A
0 years, male, white, stage:Stage I, dead, 654 days
7.7
TCGA-BA-5558-01A
0 years, male, white, stage:'--, alive, 1995 days
7.7
TCGA-QK-A6IG-01A
0 years, male, white, stage:Stage III, dead, 222 days
7.7
TCGA-UF-A7JJ-01A
0 years, male, stage:Stage IVA, alive, 549 days
7.6
TCGA-D6-A4ZB-01A
0 years, male, white, stage:Stage III, alive, 376 days
7.6
TCGA-IQ-A61G-01A
0 years, male, white, stage:Stage IVA, alive, 360 days
7.5
TCGA-CR-5247-01A
0 years, male, black or african american, stage:'--, alive, 358 days
7.5
TCGA-CQ-5332-01A
0 years, male, white, stage:Stage III, dead, 317 days
7.4
TCGA-CN-4722-01A
0 years, female, white, stage:Stage II, alive, 1483 days
7.4
TCGA-P3-A6T5-01A
0 years, female, white, stage:Stage IVA, dead, 882 days
7.4
TCGA-QK-AA3K-01A
0 years, male, black or african american, stage:Stage IVA, alive, 253 days
7.4
TCGA-CQ-7065-01A
0 years, male, asian, stage:Stage II, alive, 1628 days
7.3
TCGA-CV-6961-01A
0 years, male, white, stage:Stage II, dead, 76 days
7.2
TCGA-CQ-A4C6-01A
0 years, male, asian, stage:Stage II, alive, 1353 days
7.2
TCGA-CV-7425-01A
0 years, female, white, stage:Stage III, dead, 1718 days
7.2
TCGA-CQ-5333-01A
0 years, male, white, stage:Stage II, dead, 341 days
7.1
TCGA-F7-A50J-01A
0 years, female, white, stage:Stage III, alive, 947 days
7.1
TCGA-H7-A76A-01A
0 years, male, white, stage:'--, alive, 637 days
7.1
TCGA-D6-A6EP-01A
0 years, male, white, stage:Stage III, alive, 424 days
7.1
TCGA-CN-6019-01A
0 years, male, white, stage:Stage IVA, alive, 1038 days
7.0
TCGA-BA-6870-01A
0 years, female, black or african american, stage:'--, dead, 451 days
7.0
TCGA-IQ-A61I-01A
0 years, male, black or african american, stage:Stage IVA, dead, 2 days
7.0
TCGA-IQ-A61O-01A
0 years, male, white, stage:Stage IVA, dead, 421 days
7.0
TCGA-P3-A5Q5-01A
0 years, male, white, stage:Stage IVA, alive, 910 days
7.0
TCGA-TN-A7HL-01A
0 years, male, white, stage:Stage IVA, alive, 619 days
6.8
TCGA-CN-A6UY-01A
0 years, male, white, stage:Stage IVA, alive, 713 days
6.7
TCGA-UF-A71A-01A
0 years, male, white, stage:Stage IVA, dead, 86 days
6.6
TCGA-CV-5979-01A
0 years, male, white, stage:Stage IVA, alive, 1315 days
6.6
TCGA-CV-A6K2-01A
0 years, male, white, stage:Stage IVA, dead, 317 days
6.6
TCGA-DQ-5630-01A
0 years, male, white, stage:'--, alive, 1030 days
6.5
TCGA-IQ-A6SH-01A
0 years, male, black or african american, stage:Stage III, alive, 471 days
6.5
TCGA-CQ-6223-01A
0 years, male, white, stage:Stage II, alive, 1428 days
6.4
TCGA-BA-A6DD-01A
0 years, male, black or african american, stage:Stage IVA, dead, 173 days
6.4
TCGA-CN-4733-01A
0 years, male, white, stage:Stage III, alive, 1586 days
6.3
TCGA-UF-A7JF-01A
0 years, male, white, stage:Stage IVA, alive, 1686 days
6.3
TCGA-H7-8501-01A
0 years, male, white, stage:Stage IVA, alive, 461 days
6.3
TCGA-CN-A49B-01A
0 years, male, white, stage:Stage III, alive, 904 days
6.2
TCGA-F7-A622-01A
0 years, male, white, stage:Stage III, dead, 359 days
6.2
TCGA-TN-A7HI-01A
0 years, male, white, stage:Stage IVA, alive, 412 days
6.1
TCGA-IQ-7631-01A
0 years, female, white, stage:Stage II, alive, 1172 days
6.1
TCGA-CV-5443-01A
0 years, male, black or african american, stage:Stage III, alive, 2784 days
6.1
TCGA-BB-8601-01A
0 years, male, black or african american, stage:Stage III, alive, 624 days
6.0
TCGA-CV-A45W-01A
0 years, male, white, stage:Stage II, dead, 1398 days
6.0
TCGA-CV-A45T-01A
0 years, female, white, stage:'--, dead, 4856 days
5.9
TCGA-P3-A5Q6-01A
0 years, male, white, stage:Stage IVA, dead, 480 days
5.9
TCGA-F7-A61V-01A
0 years, male, white, stage:Stage II, alive, 759 days
5.8
TCGA-CV-6436-01A
0 years, male, white, stage:Stage IVA, alive, 1899 days
5.8
TCGA-HD-A633-01A
0 years, male, white, stage:Stage IVA, alive, 421 days
5.8
TCGA-4P-AA8J-01A
0 years, male, black or african american, stage:Stage IVA, alive, 102 days
5.7
TCGA-QK-A6IH-01A
0 years, female, white, stage:Stage IVB, alive, 653 days
5.6
TCGA-CV-A6K1-01A
0 years, male, white, stage:Stage IVA, alive, 685 days
5.5
TCGA-BA-5152-01A
0 years, male, white, stage:Stage IVA, alive, 1288 days
5.5
TCGA-MT-A7BN-01A
0 years, male, white, stage:Stage IVA, alive, 469 days
5.0
TCGA-MT-A67A-01A
0 years, female, white, stage:Stage I, alive, 914 days
4.7
TCGA-CV-A6JU-01A
0 years, female, white, stage:Stage IVB, alive, 110 days
4.6
TCGA-D6-A6EQ-01A
0 years, male, white, stage:Stage IVA, alive, 368 days
4.5
TCGA-CN-4726-01A
0 years, male, white, stage:Stage IVA, dead, 142 days
4.4
TCGA-CV-A45O-01A
0 years, male, white, stage:'--, alive, 851 days
4.1
TCGA-CV-A6JE-01A
0 years, male, white, stage:'--, alive, 1075 days
4.1
TCGA-T2-A6WZ-01A
0 years, male, white, stage:'--, dead, 484 days
4.0
TCGA-CV-A6JT-01A
0 years, male, white, stage:Stage II, alive, 852 days
4.0
TCGA-D6-A6EM-01A
0 years, female, white, stage:Stage III, alive, 232 days
3.9
TCGA-CV-A6JN-01A
0 years, male, white, stage:'--, alive, 906 days
3.7
TCGA-F7-A624-01A
0 years, male, white, stage:Stage II, alive, 378 days
3.7
TCGA-QK-A6IJ-01A
0 years, male, white, stage:Stage III, alive, 387 days
3.6
TCGA-D6-A6EN-01A
0 years, male, white, stage:Stage III, alive, 687 days
3.5
TCGA-BA-7269-01A
0 years, male, white, stage:Stage III, alive, 1273 days
3.3
TCGA-CN-A63V-01A
0 years, male, white, stage:Stage IVA, alive, 679 days
3.1
TCGA-BA-4074-01A
0 years, male, white, stage:Stage IVA, dead, 462 days
3.1
TCGA-BA-A6D8-01A
0 years, male, black or african american, stage:Stage IVA, alive, 850 days
3.0
TCGA-CV-A6JM-01A
0 years, male, white, stage:'--, dead, 194 days
2.8
TCGA-D6-A6ES-01A
0 years, male, white, stage:Stage IVA, alive, 389 days
2.7
TCGA-BA-4075-01A
0 years, male, black or african american, stage:Stage III, dead, 283 days
2.6
TCGA-QK-A6II-01A
0 years, male, white, stage:Stage IVA, dead, 284 days
2.5
TCGA-D6-A6EK-01A
0 years, male, white, stage:Stage III, alive, 875 days
2.4
TCGA-BA-A6DA-01A
0 years, female, white, stage:Stage IVA, alive, 351 days
2.2
TCGA-MZ-A7D7-01A
0 years, male, white, stage:Stage IVA, alive, 547 days
1.9
TCGA-UF-A7JS-01A
0 years, male, white, stage:Stage IVA, dead, 680 days
1.9
TCGA-CV-A45Q-01A
0 years, female, white, stage:'--, dead, 5152 days
1.7
TCGA-HD-A6I0-01A
0 years, male, white, stage:Stage IVA, alive, 210 days
1.4
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HEAD AND NECK SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
183
Samples
Sample ID
Sample type
nRPX
CPT0190850003
Tumor
0.9
CPT0194790003
Tumor
0.8
CPT0226130003
Tumor
0.6
CPT0163910003
Tumor
0.6
CPT0226250004
Tumor
0.6
CPT0281470002
Normal
0.6
CPT0222180003
Tumor
0.6
CPT0245230004
Tumor
0.6
CPT0163410003
Tumor
0.5
CPT0236850004
Tumor
0.4
CPT0084630009
Tumor
0.4
C3N-01620-05
Normal
0.4
CPT0162990004
Tumor
0.4
CPT0163650003
Tumor
0.4
CPT0241980004
Tumor
0.4
CPT0245350003
Tumor
0.3
CPT0229220002
Normal
0.3
CPT0246540003
Tumor
0.3
CPT0226390003
Tumor
0.3
CPT0163250003
Normal
0.3
CPT0261520003
Tumor
0.3
CPT0207870004
Tumor
0.3
CPT0226030003
Tumor
0.3
CPT0245060004
Tumor
0.3
CPT0184530003
Tumor
0.3
CPT0226440003
Tumor
0.3
CPT0094580003
Normal
0.2
CPT0245130003
Tumor
0.2
CPT0245730003
Tumor
0.2
CPT0123260003
Tumor
0.2
CPT0169740004
Normal
0.2
CPT0162890003
Tumor
0.2
CPT0177710003
Tumor
0.2
CPT0094490004
Tumor
0.2
CPT0196040003
Tumor
0.2
CPT0194960003
Tumor
0.2
CPT0008520008
Tumor
0.2
CPT0088430003
Normal
0.2
CPT0220610003
Tumor
0.2
CPT0169640003
Tumor
0.2
CPT0222200003
Normal
0.2
CPT0163600003
Tumor
0.2
CPT0190860003
Normal
0.2
CPT0088010003
Normal
0.2
CPT0011290003
Tumor
0.2
CPT0223450003
Tumor
0.2
CPT0278700002
Normal
0.2
CPT0169890003
Tumor
0.2
CPT0176770003
Tumor
0.2
CPT0094420004
Tumor
0.2
CPT0235470002
Normal
0.1
CPT0163800003
Normal
0.1
CPT0011130005
Tumor
0.1
CPT0163170003
Normal
0.1
CPT0127050003
Tumor
0.1
CPT0223970003
Tumor
0.1
CPT0163020003
Normal
0.1
CPT0237640003
Normal
0.1
CPT0194250003
Tumor
0.1
CPT0245400003
Tumor
0.1
CPT0163720003
Normal
0.1
C3N-00295-05
Normal
0.1
CPT0201830004
Tumor
0.1
CPT0163610003
Normal
0.1
CPT0177200003
Tumor
0.1
CPT0226270003
Normal
0.1
CPT0024810003
Tumor
0.1
C3N-04276-06
Normal
0.1
CPT0169730003
Tumor
0.1
CPT0246590003
Tumor
0.1
CPT0226340003
Tumor
0.1
CPT0248350003
Normal
0.1
CPT0235910003
Tumor
0.1
CPT0194260003
Normal
0.1
CPT0245450003
Tumor
0.1
CPT0248330003
Tumor
0.1
CPT0226090003
Normal
0.1
CPT0008630003
Tumor
0.1
CPT0084650004
Normal
0.1
CPT0236620003
Tumor
0.1
CPT0177220003
Normal
0.1
CPT0163340003
Tumor
0.1
CPT0163530003
Tumor
0.1
CPT0226350003
Normal
0.1
CPT0245560003
Normal
0.0
CPT0199880003
Tumor
0.0
CPT0163430003
Normal
0.0
CPT0094560004
Tumor
0.0
CPT0094280004
Tumor
0.0
C3N-02693-06
Normal
0.0
CPT0177010003
Tumor
0.0
CPT0094350004
Tumor
0.0
CPT0243090003
Tumor
0.0
CPT0194800003
Normal
0.0
CPT0123180003
Tumor
0.0
C3N-04275-05
Normal
0.0
CPT0223460003
Normal
0.0
C3N-00857-05
Normal
0.0
CPT0163740003
Tumor
0.0
CPT0163860003
Normal
0.0
CPT0163240003
Tumor
0.0
CPT0013130003
Tumor
0.0
CPT0013430003
Tumor
0.0
CPT0163840003
Tumor
0.0
CPT0226450003
Normal
0.0
CPT0013250003
Normal
0.0
CPT0195680003
Tumor
0.0
CPT0237500003
Normal
0.0
CPT0245020003
Normal
0.0
CPT0088080003
Normal
-0.1
CPT0243140004
Normal
-0.1
CPT0236870003
Normal
-0.1
CPT0245180003
Tumor
-0.1
CPT0088410003
Tumor
-0.1
CPT0163490003
Normal
-0.1
CPT0199820003
Tumor
-0.1
CPT0008930003
Tumor
-0.1
C3N-04279-05
Normal
-0.1
CPT0244890004
Tumor
-0.1
CPT0199710003
Normal
-0.1
CPT0163790003
Tumor
-0.1
CPT0245140003
Normal
-0.1
CPT0236640003
Normal
-0.1
CPT0245680003
Tumor
-0.1
CPT0194420003
Tumor
-0.1
CPT0201860004
Normal
-0.1
CPT0226400003
Normal
-0.1
CPT0199830003
Normal
-0.1
CPT0245010003
Tumor
-0.1
CPT0245460003
Normal
-0.1
CPT0245630003
Tumor
-0.1
CPT0245300003
Tumor
-0.1
CPT0195860003
Tumor
-0.1
CPT0013460003
Normal
-0.1
CPT0242000004
Normal
-0.2
CPT0087990003
Tumor
-0.2
CPT0246670003
Tumor
-0.2
CPT0245190003
Normal
-0.2
CPT0095040003
Tumor
-0.2
CPT0250310003
Tumor
-0.2
CPT0013210004
Tumor
-0.2
CPT0199700003
Tumor
-0.2
C3N-01859-04
Normal
-0.2
CPT0237150003
Normal
-0.2
CPT0162940003
Tumor
-0.2
CPT0199890003
Normal
-0.2
C3N-01758-04
Normal
-0.2
CPT0088060004
Tumor
-0.2
CPT0220620003
Normal
-0.2
CPT0256560003
Tumor
-0.2
CPT0195880003
Normal
-0.2
CPT0008960003
Normal
-0.2
CPT0245410003
Normal
-0.2
CPT0013030003
Normal
-0.2
CPT0244940004
Tumor
-0.3
CPT0011320003
Normal
-0.3
CPT0245500003
Tumor
-0.3
CPT0123280003
Normal
-0.3
CPT0245550003
Tumor
-0.3
CPT0195700003
Normal
-0.3
CPT0235920003
Normal
-0.3
CPT0163160003
Tumor
-0.3
CPT0123190003
Normal
-0.3
CPT0196210003
Tumor
-0.3
CPT0169920003
Normal
-0.3
CPT0245600003
Tumor
-0.3
CPT0177390003
Tumor
-0.3
CPT0163480003
Tumor
-0.3
CPT0222360003
Tumor
-0.3
CPT0196060003
Normal
-0.4
CPT0237480004
Tumor
-0.4
CPT0087820003
Tumor
-0.4
CPT0237130004
Tumor
-0.4
CPT0235460003
Tumor
-0.4
CPT0248520003
Tumor
-0.4
CPT0163090003
Tumor
-0.5
CPT0246620003
Tumor
-0.5
CPT0013000004
Tumor
-0.6
CPT0237620004
Tumor
-0.9
CPT0229230003
Normal
N/A
CPT0169750003
Normal
N/A
CPT0229210003
Tumor
N/A
CPT0229190003
Tumor
N/A
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HEAD AND NECK CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
