HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.0 nTPM
HPA Brain:32.9 nTPM
GTEx:16.0 nTPM
FANTOM5:53.9 Scaled Tags Per Million
Pig:66.8 nTPM
Mouse:69.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 32.9
Sample id Sample description nTPM
Hippocampus
nTPM: 32.9
1911 Female, age 85, right hemisphere 40.1
1898 Male, age 80, left hemisphere 37.2
1855 Male, age 76, left hemisphere 34.5
2529 Female, age 94, left hemisphere 32.4
2621 Female, age 67, right hemisphere 28.2
2148 Female, age 91, left hemisphere 25.1
Dentate gyrus
nTPM: 28.8
2010 Male, age 76, both hemispheres 32.8
2246 Female, age 85, both hemispheres 30.3
2530 Female, age 94, left hemisphere 30.2
2528 Male, age 74, both hemispheres 30.0
1927 Female, age 91, both hemispheres 28.0
2531 Female, age 67, both hemispheres 21.3
Entorhinal gyrus
nTPM: 27.0
2117 Female, age 91, right hemisphere 36.2
1938 Female, age 85, left hemisphere 27.4
1787 Male, age 76, left hemisphere 26.7
2613 Female, age 94, left hemisphere 24.9
2764 Male, age 80, right hemisphere 24.6
2686 Male, age 75, right hemisphere 22.4
Hippocampus, CA1
nTPM: 29.9
1873 Female, age 85, both hemispheres 36.9
2527 Male, age 74, both hemispheres 30.7
2045 Male, age 76, both hemispheres 29.2
2082 Female, age 91, right hemisphere 29.1
2749 Male, age 80, left hemisphere 23.6
Hippocampus, CA2
nTPM: 31.3
2249 Male, age 74, both hemispheres 38.2
1940 Female, age 85, left hemisphere 33.1
1963 Male, age 80, left hemisphere 33.1
2113 Female, age 91, right hemisphere 31.4
1892 Male, age 76, both hemispheres 27.4
2437 Female, age 94, left hemisphere 24.8
Hippocampus, CA3
nTPM: 31.1
1867 Male, age 76, both hemispheres 36.4
1891 Female, age 85, both hemispheres 35.3
2436 Male, age 74, both hemispheres 34.5
2137 Male, age 80, left hemisphere 30.3
2620 Female, age 94, left hemisphere 26.7
2861 Female, age 67, both hemispheres 23.3
Parahippocampal cortex
nTPM: 27.4
1933 Female, age 85, both hemispheres 31.5
2250 Female, age 67, right hemisphere 31.3
2018 Male, age 76, both hemispheres 30.1
2693 Female, age 94, both hemispheres 29.4
1850 Male, age 80, both hemispheres 28.5
1990 Female, age 91, right hemisphere 27.7
2692 Male, age 74, both hemispheres 27.3
2532 Female, age 72, left hemisphere 25.8
2245 Female, age 91, both hemispheres 22.9
2622 Female, age 67, right hemisphere 19.2
Perirhinal gyrus
nTPM: 25.4
1841 Female, age 85, right hemisphere 27.3
1847 Female, age 91, left hemisphere 25.7
2848 Male, age 76, right hemisphere 25.3
2521 Female, age 94, right hemisphere 24.7
1794 Male, age 80, right hemisphere 24.2
Subiculum
nTPM: 31.8
2042 Male, age 76, both hemispheres 39.4
2729 Female, age 91, right hemisphere 34.1
1901 Male, age 80, both hemispheres 32.6
1977 Female, age 85, both hemispheres 31.3
2619 Male, age 74, both hemispheres 27.0
2438 Female, age 94, left hemisphere 26.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.0
Samples: 197

Max nTPM: 30.7
Min nTPM: 5.2
Std nTPM: 5.0
Median nTPM: 15.3
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 30.7
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 30.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 29.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 27.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 26.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 26.8
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 25.7
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 25.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 25.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 24.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 24.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 53.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.9
FF:10169-103B7 60 years, female 60.2
FF:10153-102I9 76 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 66.8
Pig sample Sample description nTPM
Subiculum
nTPM: 58.6
Samples: 4

Max nTPM: 68.1
Min nTPM: 52.0
Sample A Female 68.1
Sample B Female 52.0
Sample C Male 55.5
Sample D Male 58.9
Dorsal hippocampus
nTPM: 66.8
Samples: 4

Max nTPM: 76.2
Min nTPM: 55.6
Sample A Female 76.2
Sample B Female 62.9
Sample C Male 72.6
Sample D Male 55.6
Entorhinal cortex
nTPM: 59.3
Samples: 4

Max nTPM: 67.7
Min nTPM: 50.6
Sample A Female 50.6
Sample B Female 67.7
Sample C Male 64.6
Sample D Male 54.2
Ventral hippocampus
nTPM: 61.4
Samples: 4

Max nTPM: 66.8
Min nTPM: 54.6
Sample A Female 62.5
Sample B Female 54.6
Sample C Male 61.8
Sample D Male 66.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 69.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.6
Samples: 4

Max nTPM: 67.9
Min nTPM: 56.0
Sample A Male 59.2
Sample B Male 67.9
Sample C Female 67.4
Sample D Female 56.0
Hippocampal formation
nTPM: 69.7
Samples: 4

Max nTPM: 76.8
Min nTPM: 60.4
Sample A Male 66.5
Sample B Male 60.4
Sample C Female 75.0
Sample D Female 76.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69549176 Antisense, RP_050118_02_H05, Mouse strain C57BL/6J (56 days, male) 0.0

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