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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LARP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
137.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
116.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
104.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
103.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
99.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
98.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
95.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
90.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
89.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
88.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
86.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
82.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
81.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
78.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
77.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
73.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
72.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
72.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
65.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
63.2
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
58.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
57.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
57.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
56.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
56.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
54.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
54.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
52.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
47.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
47.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
47.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
44.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
43.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
43.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
43.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
42.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
40.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
40.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
37.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
36.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
36.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
34.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
33.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
33.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
33.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
33.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
32.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
31.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
30.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
28.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
25.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
24.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
23.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
23.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
22.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
21.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
20.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
19.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
17.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
17.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
15.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
15.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LARP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
104.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
103.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
91.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
91.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
91.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
91.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
90.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
90.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
89.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
88.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
87.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
85.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
83.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
83.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
81.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
80.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
79.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
79.3
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
78.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
77.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
77.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
76.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
75.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
75.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
75.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
74.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
73.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
73.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
72.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
72.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
72.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
72.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
72.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
71.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
71.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
71.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
71.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
70.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
70.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
70.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
70.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
70.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
70.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
69.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
68.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
68.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
68.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
67.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
66.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
66.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
66.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
66.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
65.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
65.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
65.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
65.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
65.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
65.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
64.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
64.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
64.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
64.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
63.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
63.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
63.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
63.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
63.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
63.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
63.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
63.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
63.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
63.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
62.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
62.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
62.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
62.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
62.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
62.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
62.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
62.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
62.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
61.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
61.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
61.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
61.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
61.1
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
61.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
60.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
60.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
60.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
60.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
60.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
59.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
59.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
59.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
59.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
58.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
58.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
58.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
58.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
58.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
58.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
58.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
58.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
58.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
57.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
57.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
57.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
57.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
57.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
57.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
57.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
56.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
56.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
56.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
56.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
56.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
56.2
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
56.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
55.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
55.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
55.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
55.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
55.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
55.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
55.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
55.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
55.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
55.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
55.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
55.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
54.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
54.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
54.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
54.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
54.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
54.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
54.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
54.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
54.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
54.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
54.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
54.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
54.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
53.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
53.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
53.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
53.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
53.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
53.6
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
53.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
53.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
53.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
53.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
53.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
52.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
52.7
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
52.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
52.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
52.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
52.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
52.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
52.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
51.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
51.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
51.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
51.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
51.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
51.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
51.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
51.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
50.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
50.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
50.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
50.8
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
50.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
50.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
50.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
50.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
50.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
50.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
50.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
50.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
50.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
49.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
49.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
49.8
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
49.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
49.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
49.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
48.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
48.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
48.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
48.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
48.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
48.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
48.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
48.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
48.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
48.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
48.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
48.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
47.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
47.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
47.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
47.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
47.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
47.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
47.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
47.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
47.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
46.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
46.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
46.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
46.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
46.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
46.7
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
46.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
46.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
46.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
46.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
45.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
45.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
45.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
45.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
45.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
45.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
45.2
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
45.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
45.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
45.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
45.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
45.0
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
44.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
44.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
44.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
44.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
44.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
44.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
44.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
44.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
43.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
43.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
43.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
43.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
43.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
43.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
43.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
43.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
42.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
42.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
42.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
42.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
42.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
42.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
42.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
42.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
42.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
41.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
41.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
41.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
41.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
41.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
41.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
41.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
41.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
41.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
41.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
41.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
41.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
40.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
40.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
40.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
40.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
40.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
40.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
40.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
40.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
39.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
39.8
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
39.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
39.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
39.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
39.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
39.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
39.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
39.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
39.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
39.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
39.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
39.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
39.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
39.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
39.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
39.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
39.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
39.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
39.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
38.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
38.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
38.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
38.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
38.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
38.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
38.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
38.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
38.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
37.8
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
37.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
37.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
37.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
37.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
37.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
37.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
37.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
37.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
36.7
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
36.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
36.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
36.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
36.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
36.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
36.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
36.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
36.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
35.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
35.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
35.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
35.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
35.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
35.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
35.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
35.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
35.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
35.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
35.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
35.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
35.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
35.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
34.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
34.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
34.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
34.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
34.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
34.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
34.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
34.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
33.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
33.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
33.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
33.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
33.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
33.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
33.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
33.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
33.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
33.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
33.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
32.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
32.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
32.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
32.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
32.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
32.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
32.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
32.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
32.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
32.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
32.0
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
31.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
31.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
31.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
31.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
31.7
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
31.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
31.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
31.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
31.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
31.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
31.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
31.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
31.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
31.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
30.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
30.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
30.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
30.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
30.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
30.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
30.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
30.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
30.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
29.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
29.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
29.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
29.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
29.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
29.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
29.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
29.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
29.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
29.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
28.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
28.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
28.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
28.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
28.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
28.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
28.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
28.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
28.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
28.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
28.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
28.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
28.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
27.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
27.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
27.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
27.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
27.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
27.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
27.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
27.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
26.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
26.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
26.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
26.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
26.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
26.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
25.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
25.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
25.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
25.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
25.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
25.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
25.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
25.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
25.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
25.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
25.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
25.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
24.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
24.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
24.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
24.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
24.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
24.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
24.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
24.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
24.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
24.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
23.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
23.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
23.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
23.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
23.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
22.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
22.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
22.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
22.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
21.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
21.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
21.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
21.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
21.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
21.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
21.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
21.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
20.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
20.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
20.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
20.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
20.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
20.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
20.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
20.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
19.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
19.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.1
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
18.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
18.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
18.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
17.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
17.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
17.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
17.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
17.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
17.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
16.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
16.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
15.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
13.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
13.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.8
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
11.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
9.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LARP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
57.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
109.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
100.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
90.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
90.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
86.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
86.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
85.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
84.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
83.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
82.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
80.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
79.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
77.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
77.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
76.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
75.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
74.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
72.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
72.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
72.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
71.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
71.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
66.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
66.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
66.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
65.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
64.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
63.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
62.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
62.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
62.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
62.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
62.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
62.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
60.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
60.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
58.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
58.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
58.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
58.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
58.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
58.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
58.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
57.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
56.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
56.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
56.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
55.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
55.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
55.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
55.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
55.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
54.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
53.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
53.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
53.1
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
52.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
52.3
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
52.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
51.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
51.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
51.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
51.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
51.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
51.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
50.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
50.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
48.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
47.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
46.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
46.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
46.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
45.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
45.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
45.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
45.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
44.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
44.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
43.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
43.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
43.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
42.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
42.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
41.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
40.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
40.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
38.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
37.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
36.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
36.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
35.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
33.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
32.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
32.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
31.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
26.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LARP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
166.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
158.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
116.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
108.5
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
107.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
106.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
104.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
103.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
102.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
92.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
91.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
89.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
88.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
86.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
86.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
86.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
84.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
82.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
82.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
81.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
81.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
81.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
73.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
72.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
71.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
71.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
68.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
68.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
67.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
67.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
66.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
66.4
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
65.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
64.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
63.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
62.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
62.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
61.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
61.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
60.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
60.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
60.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
60.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
59.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
59.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
59.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
58.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
57.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
57.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
57.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
57.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
56.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
56.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
55.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
55.6
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
55.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
55.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
55.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
54.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
53.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
53.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
53.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
53.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
53.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
52.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
52.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
52.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
51.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
51.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
51.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
51.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
50.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
50.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
50.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
50.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
49.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
49.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
49.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
49.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
48.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
48.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
48.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
47.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
47.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
47.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
46.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
46.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
46.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
46.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
46.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
46.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
46.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
46.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
45.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
45.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
45.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
45.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
44.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
44.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
44.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
44.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
44.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
44.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
44.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
43.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
43.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
43.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
42.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
42.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
42.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
42.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
42.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
41.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
41.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
41.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
41.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
40.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
40.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
40.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
40.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
40.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
40.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
39.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
39.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
39.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
39.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
38.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
38.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
38.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
38.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
38.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
38.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
38.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
38.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
38.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
37.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
37.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
37.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
37.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
37.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
37.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
37.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
37.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
37.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
36.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
36.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
35.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
35.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
35.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
34.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
34.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
34.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
34.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
34.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
34.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
34.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
34.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
34.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
34.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
33.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
33.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
33.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
33.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
33.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
32.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
32.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
32.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
32.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
32.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
32.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
32.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
31.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
31.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
31.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
31.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
31.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
31.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
30.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
30.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
30.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
30.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
30.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
30.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
30.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
29.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
29.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
29.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
29.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
29.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
29.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
29.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
29.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.0
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
29.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
28.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
28.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
28.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
28.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
28.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
28.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
28.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
28.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
28.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
28.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
27.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
27.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
27.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
27.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
26.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
26.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
26.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
26.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
25.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
25.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
25.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
25.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
25.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
24.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
24.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
24.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
24.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
24.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
23.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
23.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
23.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
23.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
23.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
23.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
22.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
22.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
22.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
22.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
22.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
21.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
21.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
21.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
21.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
21.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
21.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
20.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
20.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
19.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
19.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
19.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
19.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
18.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
18.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
18.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
18.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
17.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
17.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
17.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
17.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
16.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
15.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
15.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
15.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
15.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
15.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
14.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
14.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
14.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
14.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
14.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
13.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
13.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
12.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
11.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
11.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
9.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
9.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.0
CPT0086820003
Tumor
0.7
CPT0086950003
Tumor
0.7
CPT0002350011
Tumor
0.6
CPT0015730003
Tumor
0.5
CPT0023350003
Tumor
0.5
CPT0079410003
Tumor
0.5
CPT0025880003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0085670003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0088970003
Tumor
0.3
CPT0088550004
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0075560003
Tumor
0.1
CPT0025350003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0087050003
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0079430001
Normal
0.1
CPT0006440003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0063630003
Tumor
0.1
CPT0092800003
Normal
0.1
CPT0087040003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0086370003
Normal
0.1
CPT0077140001
Normal
0.1
CPT0088760003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0089480003
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0081600003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0026410003
Tumor
0.0
CPT0092730003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0006950001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0092790003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0010160003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0001270001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0086890003
Normal
0.0
CPT0088690003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0007470001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0086970003
Normal
0.0
CPT0088780001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0086830003
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0000780007
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0078670001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0077110003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0065690003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0092290003
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0012290003
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0077490003
Tumor
-0.2
CPT0017850003
Tumor
-0.2
CPT0009020003
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0088630003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0012080003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0025170003
Tumor
-0.3
CPT0079510001
Normal
-0.3
CPT0011410003
Tumor
-0.4
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
