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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRK is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
22.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
21.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
18.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
18.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
18.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
17.2
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
17.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
16.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
16.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
14.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
14.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
13.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
12.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
12.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
12.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
11.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
10.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
9.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
8.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
8.7
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
8.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
6.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
6.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
6.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
6.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
6.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
6.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
6.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
5.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
5.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
4.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
4.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
4.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
4.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
4.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
3.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
3.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
2.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
2.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
2.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
2.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRK is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
60.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
60.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
57.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
55.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
55.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
53.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
50.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
49.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
49.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
49.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
47.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
47.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
47.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
47.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
46.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
46.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
46.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
45.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
45.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
44.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
44.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
44.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
43.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
43.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
43.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
43.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
42.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
42.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
41.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
41.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
41.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
41.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
41.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
40.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
40.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
40.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
39.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
39.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
39.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
38.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
38.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
38.6
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
38.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
38.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
37.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
37.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
37.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
37.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
37.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
37.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
37.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
36.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
36.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
36.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
36.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
36.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
36.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
36.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
36.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
36.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
35.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
35.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
35.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
35.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
34.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
34.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
34.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
34.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
34.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
34.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
33.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
33.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
33.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
33.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
33.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
33.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
33.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
33.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
33.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
32.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
32.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
32.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
32.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
32.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
32.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
31.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
31.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
31.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
31.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
31.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
31.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
31.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
31.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
31.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
31.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
31.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
31.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
30.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
30.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
30.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
30.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
30.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
30.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
30.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
30.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
30.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
30.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
30.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
30.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
30.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
30.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
29.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
29.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
29.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
29.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
29.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
29.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
29.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
29.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
29.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
29.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
29.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
29.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
29.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
28.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
28.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
28.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
28.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
28.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
28.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
28.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
28.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
28.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
28.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
28.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
28.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
28.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
28.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
27.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
27.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
27.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
27.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
27.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
27.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
27.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
27.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
27.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
26.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
26.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
26.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
26.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
26.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
26.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
26.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
26.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
26.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
26.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
26.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
26.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
25.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
25.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
25.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
25.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
25.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
25.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
25.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
25.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
25.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
25.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
25.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
25.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
24.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
24.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
24.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
24.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
24.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
24.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
24.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
24.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
24.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
23.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
23.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
23.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
23.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
23.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
23.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
23.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
23.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
23.6
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
23.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
23.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
23.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
23.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
23.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
23.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
23.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
23.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
23.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
23.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
22.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
22.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
22.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
22.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
22.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
22.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
22.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
22.2
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
22.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
22.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
22.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
22.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
22.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
21.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
21.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
21.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
21.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
21.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
21.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
21.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
21.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
21.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
21.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
21.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
21.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
21.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
21.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
21.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
20.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
20.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
20.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
20.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
20.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
20.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
20.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
20.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
20.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
20.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
20.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
20.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
20.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
20.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
19.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
19.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
19.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
19.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
19.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
19.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
19.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
19.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
19.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
19.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
19.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
18.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
18.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
18.8
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
18.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
18.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
18.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
18.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
18.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
18.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
18.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
18.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
18.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
18.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
18.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
17.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
17.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
17.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
17.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
17.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
17.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
17.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
17.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
17.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
17.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
17.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
17.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
17.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
17.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
16.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.8
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
16.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
16.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
16.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
16.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
16.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
16.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
16.4
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
16.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
16.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
16.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
15.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
15.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
15.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
15.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
15.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
15.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
15.2
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
15.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
15.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
15.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.1
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
14.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
14.8
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
14.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
14.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
14.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
14.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
14.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
14.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
13.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
13.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
13.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
13.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
13.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
13.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
13.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
13.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
12.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
12.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
12.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
12.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
12.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
12.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
12.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
12.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
12.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
11.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
11.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
11.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
11.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
11.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
11.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
11.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
11.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
11.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
10.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
10.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
10.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
10.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
10.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
10.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
10.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
10.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
10.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
10.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
10.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
10.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
10.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
10.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
9.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
9.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
9.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.8
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
9.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
9.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
9.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
9.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
8.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
8.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
8.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
8.5
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
8.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
8.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
7.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
7.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
7.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
7.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
7.7
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
7.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
7.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
6.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
6.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
6.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
6.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
6.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.2
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
6.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
6.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
5.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
5.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
5.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
5.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
5.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
5.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
5.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
5.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
4.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
4.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
4.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
4.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
4.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
4.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
3.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
3.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
2.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
2.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
1.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
1.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
1.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
1.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
1.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
1.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRK is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
59.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
53.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
52.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
52.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
49.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
48.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
47.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
45.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
44.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
43.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
43.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
42.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
42.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
41.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
41.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
41.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
41.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
40.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
39.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
39.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
38.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
38.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
37.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
36.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
35.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
34.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
32.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
32.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
31.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
31.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
31.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
31.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
31.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
30.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
30.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
30.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
29.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
29.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
28.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
28.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
28.2
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
27.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
26.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
26.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
25.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
25.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
24.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
24.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
24.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
23.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
22.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
22.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
22.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
21.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
20.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
20.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
19.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
19.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
19.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
18.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
18.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
18.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
18.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
18.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
17.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
17.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
17.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
17.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
17.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
17.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
15.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
15.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
15.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
15.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
14.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
14.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
12.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
11.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
8.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
6.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
6.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRK is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
64.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
64.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
61.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
61.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
61.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
60.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
60.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
57.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
56.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
56.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
56.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
51.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
51.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
49.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
49.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
47.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
46.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
46.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
44.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
43.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
41.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
41.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
41.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
40.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
40.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
39.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
39.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
39.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
39.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
38.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
38.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
36.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
35.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
35.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
35.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
35.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
35.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
35.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
34.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
34.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
33.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
33.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
33.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
32.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
32.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
32.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
31.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
31.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
31.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
31.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
30.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
30.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
30.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
30.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
29.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
29.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
29.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
28.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
28.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
28.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
27.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
27.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
27.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
27.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
27.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
26.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
26.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
25.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
25.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
25.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
25.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
25.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
24.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
24.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
24.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
24.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
24.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
23.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
23.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
23.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
23.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
22.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
22.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
22.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
22.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
22.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
22.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
22.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
22.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
21.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
21.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
21.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
21.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
21.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
21.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
21.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
21.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
20.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
20.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
20.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
20.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
20.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
19.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
19.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
19.6
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
19.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
19.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
19.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
19.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
19.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
19.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
19.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
19.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
19.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
19.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
19.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
19.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
19.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
19.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
19.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
18.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
18.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
18.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
18.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
17.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
17.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
17.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
17.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
17.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
17.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
17.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
17.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
17.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
16.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
16.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
16.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
15.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
15.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
15.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
15.3
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
15.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
15.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
14.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
14.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
14.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
14.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
14.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
13.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
13.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
13.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
13.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
13.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
13.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
13.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
13.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
13.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
12.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
12.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
12.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
12.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
11.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
11.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.5
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
11.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
10.9
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
10.9
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
10.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
10.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
10.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
10.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
10.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
9.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
9.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
9.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
9.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
9.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
9.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
9.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
8.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
8.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
8.2
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
7.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
7.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
7.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.0
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
6.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
6.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
6.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
6.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
6.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
6.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
6.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
5.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
5.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
5.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
4.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
4.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
4.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.2
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
3.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
2.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
2.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
2.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
2.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
0.8
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078800003
Tumor
1.1
CPT0009000003
Tumor
0.7
CPT0077490003
Tumor
0.7
CPT0065430003
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0088900003
Tumor
0.6
CPT0015730003
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0086360003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0025230003
Tumor
0.4
CPT0009060003
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0019130003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0012770003
Normal
0.3
CPT0012080003
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0006900003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0026420001
Normal
0.3
CPT0089020003
Tumor
0.3
CPT0065750003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0065450001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0021240003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0092800003
Normal
0.2
CPT0007320003
Tumor
0.2
CPT0000890001
Normal
0.2
CPT0006630003
Tumor
0.2
CPT0014350001
Normal
0.2
CPT0000870016
Tumor
0.2
CPT0000790001
Normal
0.2
CPT0000640003
Tumor
0.2
CPT0088780001
Normal
0.2
CPT0082010001
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0088920001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0011240003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0012670003
Tumor
0.2
CPT0063640001
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0078510003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0015910003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0077500001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0089040001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0012640003
Normal
0.1
CPT0026410003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0000780007
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0088640003
Normal
0.1
CPT0064370003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0012290003
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0078840001
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0001230001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0064400001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0065870003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0025610001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0025350003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0084590001
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0014450004
Tumor
-0.1
CPT0014470001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0079270003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0025110003
Tumor
-0.1
CPT0088630003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0092290003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0065690003
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0076330003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0081990003
Tumor
-0.2
CPT0089460004
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0025880003
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0024670003
Tumor
-0.2
CPT0001550001
Normal
-0.2
CPT0012550003
Tumor
-0.2
CPT0012370003
Tumor
-0.3
CPT0077110003
Tumor
-0.3
CPT0012280003
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0006440003
Tumor
-0.3
CPT0092160003
Tumor
-0.3
CPT0025050003
Tumor
-0.4
CPT0017410003
Tumor
-0.4
CPT0017850003
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0023350003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0014370004
Tumor
-0.5
CPT0079410003
Tumor
-0.5
CPT0025290003
Tumor
-0.5
CPT0078830003
Tumor
-0.5
CPT0084560003
Tumor
-0.6
CPT0002270011
Tumor
-0.6
CPT0081880003
Tumor
-0.6
CPT0086870003
Tumor
-0.7
CPT0001260009
Tumor
-0.7
CPT0079180003
Tumor
-0.7
CPT0012180003
Tumor
-0.8
CPT0078660003
Tumor
-0.8
CPT0001180009
Tumor
-1.0
CPT0001340003
Tumor
-1.3
CPT0088550004
Tumor
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
