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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAR1B is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
68.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
67.5
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
64.1
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
60.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
57.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
55.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
49.1
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
46.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
46.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
45.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
42.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
42.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
41.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
41.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
41.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
39.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
38.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
38.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
38.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
38.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
36.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
36.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
36.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
35.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
33.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
33.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
32.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
32.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
32.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
32.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
32.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
29.0
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
28.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
28.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
28.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
27.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
27.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
26.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
26.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
25.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
24.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
24.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
24.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
23.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
23.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
23.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
23.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
22.9
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
22.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
21.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
21.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
20.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
19.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
19.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
19.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
18.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
15.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.9
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
13.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
8.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAR1B is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
39.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
117.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
114.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
95.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
85.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
85.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
83.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
83.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
83.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
79.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
79.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
76.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
75.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
74.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
74.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
74.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
73.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
72.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
72.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
72.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
70.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
70.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
70.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
69.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
69.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
69.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
68.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
68.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
67.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
67.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
66.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
66.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
66.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
66.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
65.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
65.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
65.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
65.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
63.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
63.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
63.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
63.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
63.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
62.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
62.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
62.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
62.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
62.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
62.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
61.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
61.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
61.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
61.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
61.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
61.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
61.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
60.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
60.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
60.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
59.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
59.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
59.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
59.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
59.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
59.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
58.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
58.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
57.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
57.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
57.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
57.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
57.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
57.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
57.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
57.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
56.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
56.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
55.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
55.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
55.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
55.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
55.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
55.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
54.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
54.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
54.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
54.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
54.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
54.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
54.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
54.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
53.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
53.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
53.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
52.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
52.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
52.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
52.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
52.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
51.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
51.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
51.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
51.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
51.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
51.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
51.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
51.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
51.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
50.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
50.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
50.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
50.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
50.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
50.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
49.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
49.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
49.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
49.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
49.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
49.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
49.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
49.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
49.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
49.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
48.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
48.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
48.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
48.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
48.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
48.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
48.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
48.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
48.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
48.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
47.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
47.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
47.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
47.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
47.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
47.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
47.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
47.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
47.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
47.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
47.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
47.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
47.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
46.9
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
46.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
46.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
46.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
46.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
46.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
46.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
46.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
46.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
46.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
45.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
45.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
45.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
45.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
45.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
45.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
45.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
45.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
44.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
44.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
44.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
44.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
44.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
44.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
44.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
44.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
44.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
44.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
44.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
44.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
44.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
44.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
44.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
44.2
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
43.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
43.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
43.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
43.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
43.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
43.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
43.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
42.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
42.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
42.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
42.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
42.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
42.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
42.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
42.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
42.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
41.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
41.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
41.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
41.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
41.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
41.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
41.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
41.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
41.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
41.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
41.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
41.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
41.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
41.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
40.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
40.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
40.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
40.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
40.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
40.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
40.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
40.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
40.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
40.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
40.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
40.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
40.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
40.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
40.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
40.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
40.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
39.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
39.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
39.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
39.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
39.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
39.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
39.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
39.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
39.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
39.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
39.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
39.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
39.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
39.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
39.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
38.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
38.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
38.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
38.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
38.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
38.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
38.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
38.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
38.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
38.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
38.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
37.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
37.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
37.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
37.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
37.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
37.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
37.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
37.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
37.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
37.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
37.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
37.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
37.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
37.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
37.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
37.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
37.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
37.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
36.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
36.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
36.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
36.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
36.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
36.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
36.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
36.3
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
36.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
36.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
36.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
36.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
36.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
36.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
35.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
35.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
35.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
35.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
35.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
35.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
35.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
35.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
35.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
35.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
34.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
34.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
34.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
34.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
34.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
34.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
34.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
34.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
34.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
34.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
34.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
34.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
34.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
34.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
34.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
33.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
33.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
33.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
33.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
33.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
33.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
33.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
33.2
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
33.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
33.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
32.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
32.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
32.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
32.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
32.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
32.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
32.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
32.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
32.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
32.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
31.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
31.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
31.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
31.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
31.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
31.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
31.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
31.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
31.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
31.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
31.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
31.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
31.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
31.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
30.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
30.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
30.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
30.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
30.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
30.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
30.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
30.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
30.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
30.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
30.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
29.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
29.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
29.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
29.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
29.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
29.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
29.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
29.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
29.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
29.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
29.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
29.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
29.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
28.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
28.8
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
28.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
28.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
28.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
28.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
28.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
28.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
28.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
28.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
28.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
28.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
28.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
28.2
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
28.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
28.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
27.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
27.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
27.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
27.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
27.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
27.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
27.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
27.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
27.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
27.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
26.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
26.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
26.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
26.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
26.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
26.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
26.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
26.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
26.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
26.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
26.2
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
26.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
25.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
25.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
25.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
25.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
25.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
25.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
25.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
25.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
25.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
25.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
25.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
24.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
24.8
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
24.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
24.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
24.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
24.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
24.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
24.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
24.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
24.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
24.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
23.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
23.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
23.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
23.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
23.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
23.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
23.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
22.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
22.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
22.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
22.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
22.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
22.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
22.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
22.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
22.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
22.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
22.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
21.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
21.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
21.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
21.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
20.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
20.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
20.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
20.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
20.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
20.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
20.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
19.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
19.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
19.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
19.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
19.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
18.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
18.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
18.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
18.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
18.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
18.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
17.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
17.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
17.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
17.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
17.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
17.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
16.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
16.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
16.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
16.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
15.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
15.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
15.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
13.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
13.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
12.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
12.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
11.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
11.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
10.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
9.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAR1B is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
44.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
85.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
84.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
83.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
73.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
71.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
69.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
69.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
68.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
68.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
67.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
67.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
66.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
65.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
64.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
63.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
62.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
62.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
61.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
61.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
58.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
58.2
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
58.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
57.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
55.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
53.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
52.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
52.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
51.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
51.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
50.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
50.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
50.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
49.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
49.3
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
49.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
48.7
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
47.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
47.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
47.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
47.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
47.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
46.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
46.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
46.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
46.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
45.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
45.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
43.1
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
43.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
42.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
42.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
42.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
41.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
41.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
41.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
40.9
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
40.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
39.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
39.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
39.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
39.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
37.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
37.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
37.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
36.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
36.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
35.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
35.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
35.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
34.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
34.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
33.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
32.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
31.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
31.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
29.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
29.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
28.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
28.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
28.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
28.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
28.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.1
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
26.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
24.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
22.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
22.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
21.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SAR1B is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
93.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
87.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
78.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
77.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
71.2
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
62.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
61.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
60.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
58.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
56.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
53.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
52.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
51.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
50.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
48.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
46.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
45.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
45.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
44.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
44.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
44.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
44.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
44.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
44.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
43.7
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
43.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
43.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
42.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
42.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
41.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
41.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
41.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
41.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
41.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
41.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
41.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
40.9
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
40.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
40.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
39.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
39.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
39.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
39.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
38.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
38.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
37.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
37.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
37.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
37.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
37.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
37.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
36.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
36.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
36.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
36.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
35.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
35.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
34.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
34.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
34.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
34.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
34.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
34.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
34.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
33.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
33.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
33.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
33.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
33.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
33.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
32.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
32.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
32.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
32.5
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
32.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
32.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
32.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
32.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
32.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
32.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
32.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
32.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
32.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
32.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
32.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
32.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
31.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
31.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
31.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
31.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
31.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
31.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
31.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
31.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
31.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
30.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
30.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
30.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
30.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
30.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
30.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
30.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
30.1
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
29.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
29.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
29.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
29.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
29.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
29.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
29.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
29.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
28.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
28.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
28.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
28.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
28.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
28.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
28.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
28.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
28.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
27.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
27.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
27.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
27.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
27.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
27.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
27.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
26.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
26.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
26.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
26.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
26.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
26.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
26.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
25.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
25.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
25.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
25.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
24.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
24.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
24.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
24.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
24.5
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
24.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
24.3
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
24.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
24.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
23.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
23.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
23.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
23.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
23.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
23.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
23.3
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
23.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
23.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
23.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
23.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
23.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
23.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
22.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
22.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
22.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
22.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
21.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
21.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
21.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
21.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
21.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
21.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
20.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
20.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
20.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
20.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
20.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
20.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
20.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
20.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
19.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
19.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
19.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
19.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
19.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
18.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
18.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
18.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
18.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
18.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
18.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
18.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
18.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
18.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
18.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
18.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
18.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
17.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
16.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
16.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
16.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
16.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
16.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
16.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
16.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
16.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
16.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
15.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
15.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
15.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
15.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
15.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
15.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
14.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
14.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
13.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
13.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
12.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
11.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
11.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
11.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
9.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
9.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
8.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
8.9
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
8.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
8.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
8.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
6.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
6.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
4.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
4.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.7
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.6
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
2.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
1.0
CPT0025110003
Tumor
1.0
CPT0079270003
Tumor
0.9
CPT0002270011
Tumor
0.6
CPT0026420001
Normal
0.5
CPT0015730003
Tumor
0.5
CPT0006950001
Normal
0.5
CPT0066430001
Normal
0.4
CPT0092800003
Normal
0.4
CPT0065450001
Normal
0.4
CPT0009080003
Normal
0.4
CPT0025610001
Normal
0.4
CPT0079430001
Normal
0.4
CPT0012090003
Normal
0.4
CPT0081620001
Normal
0.4
CPT0077140001
Normal
0.4
CPT0075570001
Normal
0.3
CPT0013790003
Normal
0.3
CPT0012770003
Normal
0.3
CPT0007320003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0023360001
Normal
0.3
CPT0025880003
Tumor
0.3
CPT0020020001
Normal
0.3
CPT0023710001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0088920001
Normal
0.3
CPT0076350001
Normal
0.3
CPT0012570003
Normal
0.3
CPT0092740003
Normal
0.3
CPT0025060001
Normal
0.3
CPT0088550004
Tumor
0.3
CPT0087050003
Normal
0.3
CPT0077500001
Normal
0.3
CPT0010170001
Normal
0.3
CPT0078660003
Tumor
0.3
CPT0012290003
Normal
0.3
CPT0086820003
Tumor
0.3
CPT0078840001
Normal
0.3
CPT0000790001
Normal
0.3
CPT0088780001
Normal
0.3
CPT0014350001
Normal
0.2
CPT0006730001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0069010001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0024670003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0018250001
Normal
0.2
CPT0017450001
Normal
0.2
CPT0064400001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0007470001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0000890001
Normal
0.2
CPT0086890003
Normal
0.2
CPT0012180003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0025170003
Tumor
0.2
CPT0064370003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0076330003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0007870001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0012920003
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0001340003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0088500001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0023350003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0086870003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0086830003
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0075560003
Tumor
0.0
CPT0065430003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0025920001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0012280003
Tumor
-0.1
CPT0077110003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0011410003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0069190001
Normal
-0.2
CPT0085670003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0065690003
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0081600003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0077310003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0087040003
Tumor
-0.2
CPT0081990003
Tumor
-0.3
CPT0001270001
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0086950003
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0065750003
Tumor
-0.3
CPT0075130003
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0066480003
Tumor
-0.3
CPT0079300001
Normal
-0.3
CPT0066470004
Tumor
-0.3
CPT0077490003
Tumor
-0.4
CPT0079380003
Tumor
-0.4
CPT0010160003
Tumor
-0.4
CPT0014160003
Tumor
-0.4
CPT0019990003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0088480003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0063630003
Tumor
-0.4
CPT0092290003
Tumor
-0.4
CPT0088760003
Tumor
-0.4
CPT0077320001
Normal
-0.4
CPT0012080003
Tumor
-0.4
CPT0009060003
Tumor
-0.5
CPT0015810003
Tumor
-0.5
CPT0025050003
Tumor
-0.5
CPT0088900003
Tumor
-0.5
CPT0025230003
Tumor
-0.5
CPT0089020003
Tumor
-0.5
CPT0092790003
Tumor
-0.5
CPT0000780007
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0021240003
Tumor
-0.5
CPT0079510001
Normal
-0.5
CPT0015910003
Tumor
-0.5
CPT0088630003
Tumor
-0.5
CPT0071150004
Tumor
-0.5
CPT0006440003
Tumor
-0.6
CPT0088970003
Tumor
-0.6
CPT0009000003
Tumor
-0.6
CPT0086030003
Tumor
-0.8
CPT0017410003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
