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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPARCL1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
635.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
2734.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2681.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
2616.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1818.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1741.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1657.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1643.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
1635.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
1507.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
1483.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
1268.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1097.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
1063.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
1053.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1013.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
990.8
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
922.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
867.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
802.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
743.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
725.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
689.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
643.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
596.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
574.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
560.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
532.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
484.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
459.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
450.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
447.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
407.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
382.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
376.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
365.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
352.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
340.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
301.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
268.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
251.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
245.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
228.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
200.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
188.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
163.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
151.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
150.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
127.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
97.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
94.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
73.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
70.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
49.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
38.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
34.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
34.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
33.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
31.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
31.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
27.8
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
20.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
11.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPARCL1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
256.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2040.3
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
2003.8
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1632.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
1420.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
1112.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1046.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
1036.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
1026.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
945.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
922.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
897.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
798.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
774.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
770.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
761.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
744.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
735.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
733.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
729.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
714.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
706.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
700.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
695.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
677.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
674.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
673.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
654.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
647.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
646.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
631.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
617.5
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
616.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
611.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
602.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
601.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
598.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
592.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
579.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
555.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
552.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
551.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
541.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
541.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
533.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
533.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
529.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
517.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
517.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
515.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
514.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
513.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
501.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
493.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
492.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
490.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
488.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
483.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
482.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
480.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
479.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
478.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
475.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
474.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
472.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
464.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
462.7
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
456.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
456.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
454.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
451.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
450.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
448.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
445.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
439.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
438.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
437.6
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
436.0
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
435.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
431.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
429.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
426.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
424.4
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
419.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
419.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
418.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
418.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
416.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
413.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
413.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
406.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
406.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
405.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
402.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
400.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
398.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
394.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
394.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
388.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
387.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
384.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
382.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
381.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
380.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
378.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
378.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
377.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
375.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
371.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
370.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
365.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
364.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
364.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
362.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
361.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
360.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
358.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
356.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
354.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
353.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
352.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
352.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
350.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
348.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
348.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
346.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
345.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
342.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
339.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
337.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
336.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
336.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
335.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
335.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
332.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
331.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
331.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
330.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
329.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
329.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
328.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
323.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
322.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
319.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
317.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
314.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
311.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
311.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
308.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
307.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
305.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
304.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
300.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
298.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
298.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
297.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
295.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
294.2
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
293.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
293.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
292.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
292.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
291.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
289.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
288.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
284.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
283.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
283.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
281.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
281.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
280.9
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
280.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
279.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
279.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
278.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
278.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
276.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
276.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
273.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
273.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
272.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
271.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
270.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
269.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
269.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
266.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
266.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
265.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
265.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
263.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
262.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
262.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
261.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
260.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
260.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
258.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
258.5
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
255.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
255.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
255.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
254.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
254.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
253.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
252.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
252.2
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
250.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
249.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
244.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
244.2
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
244.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
242.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
241.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
240.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
239.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
239.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
237.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
235.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
235.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
234.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
234.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
231.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
231.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
231.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
230.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
230.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
230.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
229.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
228.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
227.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
227.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
226.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
225.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
224.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
224.2
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
223.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
223.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
222.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
222.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
219.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
219.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
218.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
218.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
218.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
218.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
217.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
216.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
215.7
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
215.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
215.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
214.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
213.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
212.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
212.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
212.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
211.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
211.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
211.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
211.1
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
210.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
210.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
208.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
208.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
208.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
207.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
205.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
205.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
204.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
203.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
203.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
202.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
200.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
200.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
199.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
199.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
198.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
197.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
197.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
197.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
195.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
193.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
193.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
192.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
189.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
188.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
188.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
187.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
186.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
185.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
185.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
184.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
184.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
183.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
183.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
182.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
179.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
179.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
177.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
175.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
175.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
174.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
173.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
170.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
170.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
169.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
167.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
167.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
167.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
166.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
164.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
164.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
163.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
163.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
163.1
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
162.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
162.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
161.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
161.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
159.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
159.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
156.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
156.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
155.9
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
155.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
153.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
152.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
152.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
151.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
151.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
151.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
151.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
151.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
151.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
150.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
149.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
148.4
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
146.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
146.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
145.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
144.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
143.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
142.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
142.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
141.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
141.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
140.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
140.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
139.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
139.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
139.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
138.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
137.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
137.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
136.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
136.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
136.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
135.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
134.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
133.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
133.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
132.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
130.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
128.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
127.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
126.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
125.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
125.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
124.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
124.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
123.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
123.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
121.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
120.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
120.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
119.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
117.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
115.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
115.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
114.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
113.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
113.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
112.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
111.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
109.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
109.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
107.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
107.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
107.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
106.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
106.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
106.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
106.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
105.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
104.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
104.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
103.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
103.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
103.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
103.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
102.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
102.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
100.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
100.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
98.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
98.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
98.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
97.9
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
96.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
96.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
95.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
95.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
94.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
94.7
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
94.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
94.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
93.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
92.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
91.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
91.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
90.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
90.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
89.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
88.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
88.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
87.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
87.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
86.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
85.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
85.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
85.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
84.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
83.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
83.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
82.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
82.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
81.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
79.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
79.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
78.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
75.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
75.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
74.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
74.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
73.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
73.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
73.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
71.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
69.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
69.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
67.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
66.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
64.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
63.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
63.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
61.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
61.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
60.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
58.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
58.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
57.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
56.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
55.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
55.5
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
54.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
53.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
52.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
52.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
50.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
50.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
49.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
49.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
49.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
49.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
48.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
40.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
40.5
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
40.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
39.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
39.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
36.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
36.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
36.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
34.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
33.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
33.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
33.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
33.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
33.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
32.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
32.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
29.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
28.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
27.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
26.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
26.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
25.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
25.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
25.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
25.0
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
24.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
24.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
24.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
23.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
23.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
20.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
19.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
19.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
18.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
18.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
17.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
17.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
17.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
14.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
14.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
12.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.4
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
11.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
11.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
10.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPARCL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
319.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
2154.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
1195.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
1157.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
1087.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
1079.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
931.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
768.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
764.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
746.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
694.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
662.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
644.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
581.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
566.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
565.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
565.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
483.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
478.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
459.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
451.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
451.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
434.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
428.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
416.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
404.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
403.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
399.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
399.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
394.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
380.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
355.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
344.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
341.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
340.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
339.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
330.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
325.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
322.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
313.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
302.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
294.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
267.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
267.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
267.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
261.2
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
255.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
251.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
248.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
243.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
241.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
231.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
231.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
230.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
223.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
218.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
206.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
203.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
203.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
199.1
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
197.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
186.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
178.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
177.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
175.6
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
166.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
164.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
164.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
157.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
147.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
147.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
142.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
137.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
132.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
124.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
122.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
116.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
110.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
105.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
102.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
96.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
89.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
82.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
74.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
63.6
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
59.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
53.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
53.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
47.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
45.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
42.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
40.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
28.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
27.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
26.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
22.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
22.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
21.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
14.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SPARCL1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
1664.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
918.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
410.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
237.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
151.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
96.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
96.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
78.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
72.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
67.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
63.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
62.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
62.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
59.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
58.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
56.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
52.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
52.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
51.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
49.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
49.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
45.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
43.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
42.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
41.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
40.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
40.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
39.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
38.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
35.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
35.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
34.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
34.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
33.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
33.2
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
33.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
33.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
33.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
32.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
32.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
31.6
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
30.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
29.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
28.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
27.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
27.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
27.4
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
27.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
26.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
26.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
25.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
25.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
24.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
24.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
23.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
23.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
23.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
23.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
23.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
22.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
22.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
22.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
21.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
21.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
21.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
21.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
20.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
20.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
20.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
19.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
19.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
18.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
18.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
18.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
17.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
17.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
17.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
17.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
17.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
17.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
17.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
16.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
16.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
16.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.6
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
16.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
16.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
16.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
16.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.1
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
15.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
15.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
15.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
14.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
14.8
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
14.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
14.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
14.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
14.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
13.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
13.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
13.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
13.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
13.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
13.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
12.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
12.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
12.7
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
12.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
12.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
12.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
12.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
12.1
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
12.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
12.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
12.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
11.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
11.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
11.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
11.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
11.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
11.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
11.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
11.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
11.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
11.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
10.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
10.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
10.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
10.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
10.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
10.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
10.4
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
10.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
9.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
9.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
9.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
9.6
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.4
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
9.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
9.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
8.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
8.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
8.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
8.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
8.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
8.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
8.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
8.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
8.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
8.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
8.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
8.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
8.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
8.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
7.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
7.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
7.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
7.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
7.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
7.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
7.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
7.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
7.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
7.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
7.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
7.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
7.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
7.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
7.0
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
6.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
6.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
6.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
6.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
6.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
6.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
6.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
5.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
5.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
5.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
5.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
5.5
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
5.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
5.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
5.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
5.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
4.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
4.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
4.7
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
4.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
4.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
4.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
4.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
4.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
4.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
4.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
4.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
4.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
4.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
4.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
4.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
3.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
3.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
3.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
3.5
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
3.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
3.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
3.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
3.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
2.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
2.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
2.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
1.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.2
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
1.1
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
2.6
CPT0000640003
Tumor
2.3
CPT0012080003
Tumor
2.0
CPT0025350003
Tumor
1.9
CPT0077490003
Tumor
1.7
CPT0088630003
Tumor
1.6
CPT0007860003
Tumor
1.6
CPT0006440003
Tumor
1.5
CPT0017410003
Tumor
1.5
CPT0071150004
Tumor
1.5
CPT0075720003
Tumor
1.5
CPT0079270003
Tumor
1.4
CPT0085670003
Tumor
1.3
CPT0065690003
Tumor
1.3
CPT0088760003
Tumor
1.3
CPT0075560003
Tumor
1.3
CPT0065870003
Tumor
1.2
CPT0025110003
Tumor
1.2
CPT0089460004
Tumor
1.1
CPT0015910003
Tumor
1.1
CPT0069000003
Tumor
1.1
CPT0084560003
Tumor
1.0
CPT0081990003
Tumor
1.0
CPT0009000003
Tumor
1.0
CPT0077110003
Tumor
0.9
CPT0092290003
Tumor
0.9
CPT0088900003
Tumor
0.9
CPT0081600003
Tumor
0.9
CPT0011240003
Tumor
0.8
CPT0088690003
Tumor
0.7
CPT0025290003
Tumor
0.7
CPT0012370003
Tumor
0.7
CPT0014160003
Tumor
0.7
CPT0066480003
Tumor
0.7
CPT0077310003
Tumor
0.7
CPT0075130003
Tumor
0.7
CPT0066470004
Tumor
0.7
CPT0086870003
Tumor
0.7
CPT0079480003
Tumor
0.7
CPT0076330003
Tumor
0.6
CPT0063320003
Tumor
0.6
CPT0006630003
Tumor
0.6
CPT0078510003
Tumor
0.6
CPT0001340003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0019990003
Tumor
0.4
CPT0065750003
Tumor
0.4
CPT0000870016
Tumor
0.4
CPT0025880003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0065930003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0078830003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0001540009
Tumor
0.3
CPT0024680001
Normal
0.3
CPT0001260009
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0001220008
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0023690003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0021240003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0084590001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0079300001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0078660003
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0088500001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0009060003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0019160001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0019130003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0081880003
Tumor
-0.3
CPT0064370003
Tumor
-0.3
CPT0001510001
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0088480003
Tumor
-0.3
CPT0076350001
Normal
-0.3
CPT0000890001
Normal
-0.3
CPT0020130001
Normal
-0.3
CPT0001180009
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0088550004
Tumor
-0.3
CPT0078670001
Normal
-0.3
CPT0001350001
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0006900003
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0006730001
Normal
-0.4
CPT0012290003
Normal
-0.4
CPT0012570003
Normal
-0.4
CPT0001550001
Normal
-0.4
CPT0002370001
Normal
-0.4
CPT0025580004
Tumor
-0.4
CPT0065820001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0017850003
Tumor
-0.4
CPT0075570001
Normal
-0.4
CPT0025170003
Tumor
-0.4
CPT0014450004
Tumor
-0.4
CPT0018250001
Normal
-0.4
CPT0088920001
Normal
-0.5
CPT0014130001
Normal
-0.5
CPT0086830003
Normal
-0.5
CPT0092800003
Normal
-0.5
CPT0025060001
Normal
-0.5
CPT0089040001
Normal
-0.5
CPT0025230003
Tumor
-0.5
CPT0006530001
Normal
-0.5
CPT0012920003
Normal
-0.5
CPT0025920001
Normal
-0.5
CPT0092310003
Normal
-0.5
CPT0013790003
Normal
-0.5
CPT0092740003
Normal
-0.5
CPT0063330001
Normal
-0.5
CPT0077500001
Normal
-0.5
CPT0012770003
Normal
-0.5
CPT0014350001
Normal
-0.5
CPT0026420001
Normal
-0.5
CPT0078990003
Tumor
-0.5
CPT0063640001
Normal
-0.6
CPT0087050003
Normal
-0.6
CPT0007470001
Normal
-0.6
CPT0078940001
Normal
-0.6
CPT0025050003
Tumor
-0.6
CPT0000660001
Normal
-0.6
CPT0001230001
Normal
-0.6
CPT0064400001
Normal
-0.6
CPT0012090003
Normal
-0.6
CPT0088710001
Normal
-0.6
CPT0086370003
Normal
-0.6
CPT0023360001
Normal
-0.6
CPT0002270011
Tumor
-0.6
CPT0010170001
Normal
-0.6
CPT0086890003
Normal
-0.6
CPT0012670003
Tumor
-0.6
CPT0069010001
Normal
-0.6
CPT0079000001
Normal
-0.6
CPT0000790001
Normal
-0.7
CPT0023350003
Tumor
-0.7
CPT0066430001
Normal
-0.7
CPT0081620001
Normal
-0.7
CPT0009020003
Normal
-0.7
CPT0065450001
Normal
-0.7
CPT0012640003
Normal
-0.7
CPT0023710001
Normal
-0.7
CPT0009080003
Normal
-0.8
CPT0079380003
Tumor
-0.8
CPT0017450001
Normal
-0.8
CPT0078840001
Normal
-0.9
CPT0025610001
Normal
-0.9
CPT0020020001
Normal
-0.9
CPT0089480003
Normal
-0.9
CPT0088640003
Normal
-0.9
CPT0015730003
Tumor
-0.9
CPT0079430001
Normal
-1.0
CPT0088780001
Normal
-1.0
CPT0006950001
Normal
-1.0
CPT0082010001
Normal
-1.0
CPT0088970003
Tumor
-1.1
CPT0011410003
Tumor
-1.2
CPT0012180003
Tumor
-1.5
CPT0078800003
Tumor
-1.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
