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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
41.8
nTPM
HPA Brain:
91.1
nTPM
GTEx:
41.8
nTPM
FANTOM5:
72.6
Scaled Tags Per Million
Pig:
20.1
nTPM
Mouse:
9.8
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
91.1
Sample id
Sample description
nTPM
Amygdala nTPM: 91.1
2695
Female, age 67, right hemisphere
102.1
2814
Male, age 76, right hemisphere
98.4
2514
Male, age 75, right hemisphere
89.8
2517
Female, age 94, left hemisphere
85.1
1987
Female, age 91, left hemisphere
80.2
Basal amygdala nTPM: 64.2
1955
Male, age 76, both hemispheres
86.3
2609
Male, age 75, right hemisphere
72.1
2110
Male, age 80, left hemisphere
62.1
2827
Female, age 67, right hemisphere
57.0
2685
Female, age 94, left hemisphere
56.6
2243
Female, age 91, right hemisphere
51.1
Central amygdala nTPM: 72.0
1905
Male, age 76, both hemispheres
91.7
2826
Female, age 94, left hemisphere
74.3
2515
Male, age 75, right hemisphere
71.8
2701
Female, age 91, right hemisphere
61.5
2239
Male, age 80, left hemisphere
60.6
Corticomedial amygdala nTPM: 61.7
2240
Male, age 76, both hemispheres
85.1
2428
Male, age 75, right hemisphere
79.8
2429
Female, age 94, left hemisphere
59.2
2242
Female, age 91, right hemisphere
57.9
2829
Male, age 80, left hemisphere
48.3
2535
Female, age 67, right hemisphere
39.7
Lateral amygdala nTPM: 72.8
2516
Male, age 75, right hemisphere
85.5
1883
Male, age 76, both hemispheres
82.9
2830
Female, age 67, right hemisphere
75.1
2534
Female, age 94, left hemisphere
69.2
2256
Male, age 80, left hemisphere
68.7
2255
Female, age 91, right hemisphere
55.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
41.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 41.8
Samples: 152
Max nTPM: 110.5
Min nTPM: 14.7
Std nTPM: 15.5
Median nTPM: 39.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
110.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
92.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
83.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
78.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
76.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
76.2
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
75.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
72.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
69.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
69.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
67.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
65.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
65.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
60.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
60.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
60.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
60.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
58.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
58.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
58.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
57.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
56.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
56.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
55.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
54.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
53.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
53.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
53.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
52.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
52.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
52.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
51.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
51.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
51.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
51.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
50.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
50.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
49.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
49.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
49.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
49.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
48.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
48.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
48.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
48.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
48.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
48.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
47.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
46.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
46.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
45.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
44.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
44.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
44.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
43.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
43.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
43.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
43.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
43.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
43.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
43.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
43.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
42.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
42.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
42.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
41.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
41.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
41.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
41.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
41.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
41.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
41.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
40.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
40.3
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
40.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
40.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
39.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
39.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
39.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
38.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
38.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
38.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
38.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
37.4
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
37.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
36.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
36.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
36.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
36.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
36.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
36.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
35.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
35.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
35.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
34.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
34.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
33.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
33.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
33.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
33.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
33.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
33.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
33.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
32.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
32.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
32.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
32.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
32.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
32.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
32.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
32.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
31.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
31.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
31.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
31.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
31.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
30.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
30.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
30.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
30.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
30.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
29.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
29.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
29.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
28.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
28.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
28.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
27.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
27.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
27.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
27.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
26.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
26.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
25.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
24.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
24.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
23.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
23.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
23.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
23.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
22.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
22.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
22.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
21.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
21.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
20.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
20.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
19.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
18.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
18.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
17.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
14.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
9.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 9.9
Samples: 4
Max nTPM: 12.0
Min nTPM: 8.2
Sample A
Male
9.0
Sample B
Male
8.2
Sample C
Female
12.0
Sample D
Female
10.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.