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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
356.8
nTPM
HPA Brain:
241.3
nTPM
GTEx:
356.8
nTPM
FANTOM5:
79.6
Scaled Tags Per Million
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
241.3
Sample id
Sample description
nTPM
Amygdala nTPM: 221.8
2517
Female, age 94, left hemisphere
262.3
2514
Male, age 75, right hemisphere
215.1
2695
Female, age 67, right hemisphere
215.1
2814
Male, age 76, right hemisphere
212.6
1987
Female, age 91, left hemisphere
204.1
Basal amygdala nTPM: 226.8
2827
Female, age 67, right hemisphere
267.3
2685
Female, age 94, left hemisphere
244.2
2609
Male, age 75, right hemisphere
243.7
2110
Male, age 80, left hemisphere
241.7
2243
Female, age 91, right hemisphere
190.3
1955
Male, age 76, both hemispheres
173.6
Central amygdala nTPM: 231.9
2826
Female, age 94, left hemisphere
345.3
2515
Male, age 75, right hemisphere
250.7
2239
Male, age 80, left hemisphere
216.0
1905
Male, age 76, both hemispheres
186.8
2701
Female, age 91, right hemisphere
160.7
Corticomedial amygdala nTPM: 206.7
2535
Female, age 67, right hemisphere
261.8
2829
Male, age 80, left hemisphere
251.5
2428
Male, age 75, right hemisphere
205.5
2429
Female, age 94, left hemisphere
200.4
2242
Female, age 91, right hemisphere
187.9
2240
Male, age 76, both hemispheres
133.1
Lateral amygdala nTPM: 241.3
2534
Female, age 94, left hemisphere
288.5
2830
Female, age 67, right hemisphere
282.3
2516
Male, age 75, right hemisphere
258.8
2256
Male, age 80, left hemisphere
219.4
2255
Female, age 91, right hemisphere
209.0
1883
Male, age 76, both hemispheres
189.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
356.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 356.8
Samples: 152
Max nTPM: 1294.0
Min nTPM: 91.0
Std nTPM: 159.5
Median nTPM: 330.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1294.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
923.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
876.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
861.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
848.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
615.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
614.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
586.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
586.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
581.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
570.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
564.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
552.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
538.8
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
536.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
533.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
509.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
507.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
498.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
487.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
483.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
483.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
483.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
480.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
477.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
465.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
462.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
456.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
456.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
451.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
447.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
440.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
428.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
427.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
426.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
423.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
421.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
416.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
413.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
411.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
411.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
404.0
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
401.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
399.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
397.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
395.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
393.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
391.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
389.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
380.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
376.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
376.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
370.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
368.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
367.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
366.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
365.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
364.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
357.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
356.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
355.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
355.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
352.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
351.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
350.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
349.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
345.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
343.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
343.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
343.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
341.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
340.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
338.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
334.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
331.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
331.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
328.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
327.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
327.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
325.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
325.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
324.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
323.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
322.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
313.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
311.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
310.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
310.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
309.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
309.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
309.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
308.5
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
308.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
306.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
305.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
304.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
302.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
294.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
293.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
289.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
287.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
287.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
283.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
281.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
279.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
275.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
272.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
269.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
266.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
264.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
264.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
263.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
262.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
261.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
260.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
257.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
254.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
253.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
245.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
245.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
243.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
242.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
239.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
233.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
231.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
227.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
225.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
219.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
219.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
218.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
216.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
212.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
212.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
207.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
204.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
202.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
202.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
199.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
192.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
192.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
191.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
189.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
181.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
177.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
173.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
162.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
148.0
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
145.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
144.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
139.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
128.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
91.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.