HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:176.8 nTPM
HPA Brain:253.8 nTPM
GTEx:176.8 nTPM
FANTOM5:322.6 Scaled Tags Per Million
Pig:75.1 nTPM
Mouse:43.2 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030200
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 253.8
Sample id Sample description nTPM
Hippocampus
nTPM: 236.2
2529 Female, age 94, left hemisphere 261.7
1911 Female, age 85, right hemisphere 238.1
2148 Female, age 91, left hemisphere 237.6
1898 Male, age 80, left hemisphere 233.2
2621 Female, age 67, right hemisphere 225.6
1855 Male, age 76, left hemisphere 220.9
Dentate gyrus
nTPM: 227.0
2530 Female, age 94, left hemisphere 241.4
2010 Male, age 76, both hemispheres 235.7
2246 Female, age 85, both hemispheres 231.3
2528 Male, age 74, both hemispheres 224.8
2531 Female, age 67, both hemispheres 224.7
1927 Female, age 91, both hemispheres 204.1
Entorhinal gyrus
nTPM: 232.6
2686 Male, age 75, right hemisphere 284.1
2117 Female, age 91, right hemisphere 263.4
2764 Male, age 80, right hemisphere 219.8
2613 Female, age 94, left hemisphere 219.2
1938 Female, age 85, left hemisphere 215.7
1787 Male, age 76, left hemisphere 193.2
Hippocampus, CA1
nTPM: 234.7
1873 Female, age 85, both hemispheres 242.8
2527 Male, age 74, both hemispheres 242.6
2749 Male, age 80, left hemisphere 238.7
2082 Female, age 91, right hemisphere 227.4
2045 Male, age 76, both hemispheres 221.9
Hippocampus, CA2
nTPM: 228.1
1963 Male, age 80, left hemisphere 253.1
2249 Male, age 74, both hemispheres 233.6
1892 Male, age 76, both hemispheres 230.9
2113 Female, age 91, right hemisphere 222.8
1940 Female, age 85, left hemisphere 220.7
2437 Female, age 94, left hemisphere 207.4
Hippocampus, CA3
nTPM: 221.2
1891 Female, age 85, both hemispheres 254.9
1867 Male, age 76, both hemispheres 245.6
2137 Male, age 80, left hemisphere 225.4
2620 Female, age 94, left hemisphere 221.4
2861 Female, age 67, both hemispheres 196.6
2436 Male, age 74, both hemispheres 183.4
Parahippocampal cortex
nTPM: 220.6
2692 Male, age 74, both hemispheres 292.2
1850 Male, age 80, both hemispheres 245.9
2532 Female, age 72, left hemisphere 234.2
2622 Female, age 67, right hemisphere 222.5
1933 Female, age 85, both hemispheres 215.2
2245 Female, age 91, both hemispheres 211.6
2018 Male, age 76, both hemispheres 204.0
2693 Female, age 94, both hemispheres 199.6
1990 Female, age 91, right hemisphere 198.5
2250 Female, age 67, right hemisphere 181.8
Perirhinal gyrus
nTPM: 195.9
1794 Male, age 80, right hemisphere 208.6
2848 Male, age 76, right hemisphere 200.2
1841 Female, age 85, right hemisphere 199.5
2521 Female, age 94, right hemisphere 195.2
1847 Female, age 91, left hemisphere 175.9
Subiculum
nTPM: 253.8
1901 Male, age 80, both hemispheres 285.7
2438 Female, age 94, left hemisphere 271.4
2042 Male, age 76, both hemispheres 256.5
2619 Male, age 74, both hemispheres 247.5
1977 Female, age 85, both hemispheres 234.1
2729 Female, age 91, right hemisphere 227.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 176.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 176.8
Samples: 197

Max nTPM: 348.8
Min nTPM: 84.3
Std nTPM: 45.2
Median nTPM: 164.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 348.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 315.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 307.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 299.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 298.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 296.6
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 292.0
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 289.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 279.2
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 267.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 262.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 322.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 322.6
FF:10169-103B7 60 years, female 330.2
FF:10153-102I9 76 years, female 314.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 75.1
Pig sample Sample description nTPM
Subiculum
nTPM: 66.7
Samples: 4

Max nTPM: 73.9
Min nTPM: 60.5
Sample A Female 73.9
Sample B Female 61.9
Sample C Male 70.3
Sample D Male 60.5
Dorsal hippocampus
nTPM: 75.1
Samples: 4

Max nTPM: 93.8
Min nTPM: 57.1
Sample A Female 77.2
Sample B Female 72.1
Sample C Male 93.8
Sample D Male 57.1
Entorhinal cortex
nTPM: 66.2
Samples: 4

Max nTPM: 67.4
Min nTPM: 65.2
Sample A Female 67.4
Sample B Female 65.2
Sample C Male 65.9
Sample D Male 66.3
Ventral hippocampus
nTPM: 73.4
Samples: 4

Max nTPM: 82.5
Min nTPM: 61.9
Sample A Female 70.0
Sample B Female 61.9
Sample C Male 82.5
Sample D Male 79.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 43.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.2
Samples: 4

Max nTPM: 50.6
Min nTPM: 38.5
Sample A Male 45.1
Sample B Male 38.6
Sample C Female 38.5
Sample D Female 50.6
Hippocampal formation
nTPM: 34.6
Samples: 4

Max nTPM: 47.0
Min nTPM: 23.0
Sample A Male 23.0
Sample B Male 39.5
Sample C Female 47.0
Sample D Female 28.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
70238943 Antisense, RP_050526_04_E02, Mouse strain C57BL/6J (56 days, male) 0.4
73834445 Antisense, RP_051212_03_H11, Mouse strain C57BL/6J (56 days, male) 0.0

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