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  • SUMMARY

  • TISSUE

  • BRAIN

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:158.4 nTPM
HPA Brain:328.7 nTPM
GTEx:158.4 nTPM
Pig:77.9 nTPM
Mouse:55.7 nTPM
Allen mouse:0.0 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

328.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 204.6
2226 Male, age 75, left hemisphere 217.0
1961 Female, age 42, unknown 192.2
Dorsomedial nucleus
nTPM: 229.2
2017 Female, age 42, unknown 247.9
1989 Male, age 62, unknown 238.3
2041 Female, age 72, unknown 201.3
Lateral hypothalamic area
nTPM: 260.4
1791 Male, age 80, right hemisphere 272.7
2228 Male, age 66, unknown 268.0
2412 Male, age 62, unknown 254.0
2271 Male, age 75, both hemispheres 247.1
Mammillary body
nTPM: 310.0
1945 Male, age 80, right hemisphere 365.5
1948 Female, age 72, unknown 341.6
1834 Female, age 42, unknown 330.7
1923 Female, age 72, unknown 271.2
2413 Male, age 66, unknown 240.9
Paraventricular nucleus
nTPM: 328.7
2700 Male, age 62, unknown 328.7
Preoptic area
nTPM: 287.5
2414 Female, age 72, unknown 345.3
1861 Female, age 42, unknown 279.4
1907 Male, age 80, right hemisphere 237.8
Supraoptic nucleus
nTPM: 287.8
2043 Male, age 62, unknown 313.5
1894 Female, age 72, unknown 293.5
2835 Female, age 72, unknown 256.3
Ventromedial nucleus
nTPM: 210.7
1982 Female, age 72, unknown 221.0
1822 Female, age 42, unknown 200.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

158.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 158.4
Samples: 257

Max nTPM: 414.5
Min nTPM: 94.9
Std nTPM: 48.8
Median nTPM: 143.2
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 414.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 353.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 332.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 330.4
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 314.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 296.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 293.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 279.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 273.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 269.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 267.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 265.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 262.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 260.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 257.0
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 250.3
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 247.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 240.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 238.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 236.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 234.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 231.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 230.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 227.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 223.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 219.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 219.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 219.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 211.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 211.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 211.5
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 210.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 209.9
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 206.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 206.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 204.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 204.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 204.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 203.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 202.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 202.0
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 197.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 196.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 194.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 194.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 192.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 191.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 188.6
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 188.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 188.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 187.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 187.7
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 187.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 186.0
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 184.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 183.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 182.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 181.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 181.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 180.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 180.5
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 180.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 178.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 178.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 178.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 176.5
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 175.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 174.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 174.5
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 173.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 173.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 173.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 172.5
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 171.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 170.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 170.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 170.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 169.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 168.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 167.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 167.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 167.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 167.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 165.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 165.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 165.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 162.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 162.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 161.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 161.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 160.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 160.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 160.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 160.2
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 159.4
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 158.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 158.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 158.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 157.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 157.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 156.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 155.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 153.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 153.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 153.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 152.7
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 151.8
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 150.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 150.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 149.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 149.5
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 149.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 149.2
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 149.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 148.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 148.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 147.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 147.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 146.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 146.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 145.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 145.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 145.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 145.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 144.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 144.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 143.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 143.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 143.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 142.9
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 142.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 142.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 142.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 142.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 141.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 141.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 141.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 140.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 140.1
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 140.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 139.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 139.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 139.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 138.9
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 138.4
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 138.0
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 137.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 137.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 137.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 137.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 137.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 136.6
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 136.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 136.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 135.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 134.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 134.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 134.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 134.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 134.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 134.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 133.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 133.6
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 133.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 133.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 132.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 132.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 132.6
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 132.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 132.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 131.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 131.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 131.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 130.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 129.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 129.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 129.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 128.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 128.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 128.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 128.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 128.4
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 128.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 127.9
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 127.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 127.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 127.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 126.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 126.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 126.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 126.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 125.6
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 125.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 125.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 124.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 123.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 123.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 123.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 122.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 122.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 122.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 122.4
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 122.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 121.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 121.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 121.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 121.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 120.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 120.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 119.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 119.7
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 119.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 119.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 119.6
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 119.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 119.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 119.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 119.0
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 118.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 117.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 117.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 117.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 117.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 117.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 117.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 116.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 116.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 115.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 115.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 115.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 115.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 114.9
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 114.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 114.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 113.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 113.8
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 113.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 112.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 112.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 111.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 110.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 110.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 109.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 109.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 109.3
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 108.2
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 107.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 107.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 106.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 103.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 102.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 102.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 101.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 99.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 97.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 95.1
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 94.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.9
Pig sample Sample description nTPM
Hypothalamus
nTPM: 77.9
Samples: 4

Max nTPM: 85.7
Min nTPM: 64.7
Sample A Female 80.2
Sample B Female 85.7
Sample C Male 81.0
Sample D Male 64.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 55.7
Samples: 4

Max nTPM: 60.9
Min nTPM: 45.3
Sample A Male 56.5
Sample B Male 45.3
Sample C Female 60.1
Sample D Female 60.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.0
70238943 Antisense, RP_050526_04_E02, Mouse strain C57BL/6J (56 days, male) 0.0
73834445 Antisense, RP_051212_03_H11, Mouse strain C57BL/6J (56 days, male) 0.0

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