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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TWF1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
251.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
168.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
148.7
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
143.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
139.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
125.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
116.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
115.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
91.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
83.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
83.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
83.6
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
83.3
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
81.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
81.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
79.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
78.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
77.4
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
77.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
76.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
76.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
76.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
70.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
69.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
67.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
66.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
65.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
63.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
62.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
61.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
61.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
61.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
60.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
60.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
58.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
52.5
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
50.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
48.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
48.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
47.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
46.3
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
45.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
44.7
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
43.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
42.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
41.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
40.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
37.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
36.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
36.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
36.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
31.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
30.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
29.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
28.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
28.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
26.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
25.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
25.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
15.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
15.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
10.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TWF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
40.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
365.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
171.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
162.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
157.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
155.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
140.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
110.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
104.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
103.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
100.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
91.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
88.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
85.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
84.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
84.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
83.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
78.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
76.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
75.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
75.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
75.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
75.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
74.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
74.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
74.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
71.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
69.3
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
68.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
67.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
66.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
65.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
65.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
65.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
64.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
64.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
64.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
63.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
63.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
62.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
62.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
62.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
61.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
61.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
61.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
60.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
60.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
60.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
60.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
59.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
59.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
59.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
59.5
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
59.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
59.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
59.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
58.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
58.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
58.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
58.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
58.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
58.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
57.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
57.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
57.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
57.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
56.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
56.6
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
56.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
56.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
56.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
56.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
55.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
55.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
55.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
55.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
55.3
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
54.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
54.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
54.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
54.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
54.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
54.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
54.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
54.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
53.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
53.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
53.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
53.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
53.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
53.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
53.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
52.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
52.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
52.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
52.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
52.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
51.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
51.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
51.5
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
51.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
51.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
50.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
50.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
50.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
50.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
50.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
50.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
50.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
50.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
50.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
50.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
49.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
49.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
49.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
49.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
49.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
49.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
49.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
49.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
49.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
49.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
48.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
48.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
48.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
48.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
48.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
48.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
48.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
47.6
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
47.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
47.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
47.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
47.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
47.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
47.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
46.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
46.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
46.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
46.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
46.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
45.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
45.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
45.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
45.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
45.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
45.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
45.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
45.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
45.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
45.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
45.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
45.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
45.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
44.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
44.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
44.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
44.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
44.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
44.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
44.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
44.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
43.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
43.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
43.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
43.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
43.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
43.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
43.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
43.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
43.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
43.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
43.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
42.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
42.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
42.4
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
42.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
42.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
42.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
42.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
41.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
41.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
41.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
41.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
41.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
41.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
41.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
41.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
41.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
41.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
41.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
41.1
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
41.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
40.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
40.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
40.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
40.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
40.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
40.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
40.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
40.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
40.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
40.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
40.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
40.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
40.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
39.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
39.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
39.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
39.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
39.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
39.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
39.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
39.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
39.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
39.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
38.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
38.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
38.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
38.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
38.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
38.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
38.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
38.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
38.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
38.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
38.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
38.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
38.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
38.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
38.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
38.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
38.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
38.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
38.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
38.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
38.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
38.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
37.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
37.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
37.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
37.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
37.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
37.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
37.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
37.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
37.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
37.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
37.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
37.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
37.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
37.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
37.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
37.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
37.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
37.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
37.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
36.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
36.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
36.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
36.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
36.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
36.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
36.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
36.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
36.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
36.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
36.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
36.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
36.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
36.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
36.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
36.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
36.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
35.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
35.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
35.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
35.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
35.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
35.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
35.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
35.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
35.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
35.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
35.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
35.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
35.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
34.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
34.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
34.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
34.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
34.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
34.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
34.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
34.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
34.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
34.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
34.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
34.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
34.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
34.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
34.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
34.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
34.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
33.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
33.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
33.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
33.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
33.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
33.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
33.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
33.3
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
33.3
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
33.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
33.2
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
33.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
33.2
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
33.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
33.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
33.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
33.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
33.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
32.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
32.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
32.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
32.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
32.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
32.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
32.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
32.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
32.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
32.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
32.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
31.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
31.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
31.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
31.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
31.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
31.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
31.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
31.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
31.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
31.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
31.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
31.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
31.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
31.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
31.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
31.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
31.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
31.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
31.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
31.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
30.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
30.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
30.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
30.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
30.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
30.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
30.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
30.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
30.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
30.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
30.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
30.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
30.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
30.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
30.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
30.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
30.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
30.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
30.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
30.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
30.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
30.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
29.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
29.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
29.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
29.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
29.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
29.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
29.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
29.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
29.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
29.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
29.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
29.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
28.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
28.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
28.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
28.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
28.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
28.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
28.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
28.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
28.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
28.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
28.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
27.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
27.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
27.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
27.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
27.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
27.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
27.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
27.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
27.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
27.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
27.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
27.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
26.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
26.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
26.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
26.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
26.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
26.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
26.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
26.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
26.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
26.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
26.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
26.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
26.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
26.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
25.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
25.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
25.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
25.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
25.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
25.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
25.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
25.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
24.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
24.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
24.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
24.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
24.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
24.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
24.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
24.4
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
24.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
24.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
23.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
23.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
23.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
23.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
23.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
23.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
23.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
23.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
23.4
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
23.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
22.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
22.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
22.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
22.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
22.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
22.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
22.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
21.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
21.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
21.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
21.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
21.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
20.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
20.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
20.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
20.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
19.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
19.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
19.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
19.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
19.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
19.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
18.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
18.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
18.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
17.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
17.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
16.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
16.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
16.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
16.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
16.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
15.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
15.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
14.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
14.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
13.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
12.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TWF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
116.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
109.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
104.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
103.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
100.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
99.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
91.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
83.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
78.6
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
78.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
75.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
72.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
70.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
70.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
69.7
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
68.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
68.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
67.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
66.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
66.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
65.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
65.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
65.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
64.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
64.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
63.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
62.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
61.1
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
60.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
59.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
59.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
58.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
58.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
58.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
56.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
55.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
55.1
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
55.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
54.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
53.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
53.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
52.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
51.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
51.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
51.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
51.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
51.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
51.1
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
51.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
50.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
50.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
50.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
49.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
49.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
49.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
49.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
48.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
48.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
47.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
47.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
46.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
46.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
46.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
46.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
45.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
45.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
45.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
45.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
44.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
44.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
44.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
44.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
43.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
43.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
42.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
41.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
41.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
40.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
40.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
40.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
39.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
39.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
38.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
38.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
36.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
35.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
34.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
34.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
34.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
33.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
33.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
31.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
30.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
29.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
27.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
27.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
24.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TWF1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
121.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
108.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
102.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
95.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
94.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
91.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
90.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
85.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
85.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
77.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
77.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
73.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
72.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
71.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
69.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
67.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
67.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
67.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
66.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
64.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
64.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
64.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
63.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
61.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
61.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
60.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
60.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
59.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
58.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
58.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
58.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
58.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
58.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
58.3
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
56.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
55.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
54.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
53.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
53.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
53.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
53.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
51.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
50.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
50.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
50.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
50.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
49.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
49.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
49.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
49.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
49.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
48.8
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
48.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
48.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
48.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
48.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
48.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
48.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
48.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
47.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
46.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
46.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
46.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
46.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
46.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
45.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
45.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
45.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
44.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
44.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
44.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
44.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
44.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
43.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
43.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
43.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
43.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
42.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
42.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
42.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
41.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
41.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
41.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
41.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
41.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
41.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
40.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
39.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
39.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
39.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
39.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
39.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
39.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
39.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
39.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
38.6
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
38.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
38.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
38.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
38.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
37.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
37.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
37.4
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
37.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
37.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
37.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
37.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
36.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
36.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
36.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
36.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
36.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
36.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
36.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
36.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
35.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
35.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
35.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
35.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
35.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
35.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
35.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
34.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
34.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
34.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
34.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
34.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
34.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
33.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
33.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
33.2
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
32.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
32.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
32.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
32.4
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
31.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
31.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
31.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
31.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
31.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
30.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
30.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
30.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
30.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
30.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
30.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
30.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
30.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
30.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
29.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
29.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
29.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
29.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
28.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
28.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
28.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
28.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
28.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
28.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
28.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
27.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
27.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
27.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
27.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
27.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
27.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
27.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
26.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
26.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
26.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
26.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
25.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
25.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
25.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
25.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
25.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
25.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
25.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
24.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
24.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
23.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
23.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
23.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
22.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
22.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
22.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
22.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
21.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
21.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
21.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
21.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
21.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
21.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
20.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
20.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
20.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
20.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
20.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
20.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
19.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
19.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
19.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
19.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
19.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
19.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
19.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
18.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
18.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
18.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
18.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
18.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
18.3
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
18.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
18.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
17.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
17.6
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
17.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
17.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
17.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
16.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
16.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
15.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
15.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
15.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
15.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
15.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
14.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
14.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
14.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
14.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
13.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
13.4
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
13.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
13.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
12.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
12.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
11.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
11.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
11.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
10.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
10.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
9.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
9.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
9.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
8.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
8.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
7.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
7.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
7.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
6.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.6
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
2.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
2.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
2.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
2.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
2.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.7
CPT0078660003
Tumor
1.6
CPT0012550003
Tumor
1.0
CPT0088550004
Tumor
0.7
CPT0084560003
Tumor
0.6
CPT0011410003
Tumor
0.6
CPT0023350003
Tumor
0.5
CPT0024670003
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0001180009
Tumor
0.5
CPT0069160003
Tumor
0.5
CPT0001340003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0066480003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0007860003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0079510001
Normal
0.3
CPT0069000003
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0088970003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0065750003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0088480003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0017850003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0017410003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0076330003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0077140001
Normal
0.1
CPT0078800003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0024680001
Normal
0.1
CPT0089020003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0006630003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0084590001
Normal
0.1
CPT0092790003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0014130001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0078930003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0066520001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0000890001
Normal
0.0
CPT0065930003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0088920001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0086950003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0092310003
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0088900003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0079380003
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0025350003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0086370003
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0012920003
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0017450001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0001540009
Tumor
-0.1
CPT0092740003
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0001510001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0026410003
Tumor
-0.2
CPT0020020001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0078990003
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0025110003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0025920001
Normal
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
