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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC24D is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
35.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
26.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
25.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
24.9
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
24.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
21.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
20.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
20.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
20.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
19.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
18.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
18.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
16.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
16.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
15.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
15.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
15.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
15.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
14.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
12.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
11.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
11.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
10.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.5
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
9.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
9.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
8.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
8.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
8.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
6.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
6.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
6.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
6.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
5.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
4.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
4.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
4.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
3.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC24D is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
73.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
64.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
62.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
54.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
42.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
42.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
41.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
40.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
39.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
39.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
37.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
36.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
36.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
35.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
35.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
35.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
34.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
34.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
34.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
33.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
33.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
33.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
32.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
32.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
32.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
32.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
32.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
32.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
31.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
31.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
31.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
31.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
31.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
31.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
31.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
30.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
30.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
30.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
30.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
30.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
29.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
29.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
29.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
29.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
29.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
29.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
29.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
29.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
28.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
28.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
28.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
28.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
27.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
27.7
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
27.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
27.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
27.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
27.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
26.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
26.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
26.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
26.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
26.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
26.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
26.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
26.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
26.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
26.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
25.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
25.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
25.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
25.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
25.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
25.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
25.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
25.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
25.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
25.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
25.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
25.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
24.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
24.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
24.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
24.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
24.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
24.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
24.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
24.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
23.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
23.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
23.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
23.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
23.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
23.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
23.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
23.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
23.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
23.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
23.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
23.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
22.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
22.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
22.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
22.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
22.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
22.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
22.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
22.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
22.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
22.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
22.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
22.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
22.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
22.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
22.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
22.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
22.0
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
22.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
21.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
21.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
21.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
21.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
21.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
21.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
21.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
21.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
21.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
21.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
21.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
21.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
21.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
21.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
20.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
20.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
20.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
20.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
20.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
20.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
20.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
20.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
20.6
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
20.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
20.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
20.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
20.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
19.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
19.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
19.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
19.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
19.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
19.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
19.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
19.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
19.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
19.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
19.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
19.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
19.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
19.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
19.3
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
19.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
19.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
19.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
19.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
19.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
19.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
19.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
19.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
19.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
19.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
18.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
18.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
18.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
18.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
18.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
18.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
18.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
18.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
18.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
18.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
18.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
18.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
18.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
18.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
18.1
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
18.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
18.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
17.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
17.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
17.9
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
17.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
17.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
17.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
17.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
17.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
17.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
17.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
17.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
17.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
17.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
17.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
17.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
17.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
17.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
17.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
16.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
16.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
16.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
16.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
16.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
16.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
16.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
16.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
16.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
16.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
16.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
16.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
16.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
16.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
15.9
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
15.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
15.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
15.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
15.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
15.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.5
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
15.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
15.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
15.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
15.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
15.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
15.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
15.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
15.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
15.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
15.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
15.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
15.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
15.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
15.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
14.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
14.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
14.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
14.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
14.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
14.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
14.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
14.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
14.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
14.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.5
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
14.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
14.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
14.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
14.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
14.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
13.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
13.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
13.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
13.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
13.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
13.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
13.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.6
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
13.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.5
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
13.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
13.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
13.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
13.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
13.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
13.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
13.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
12.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
12.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
12.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
12.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
12.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
12.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
12.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
12.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
12.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
12.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
12.4
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
12.4
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
12.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
12.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
12.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
12.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
12.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
11.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
11.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
11.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
11.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
11.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
11.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
11.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
11.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
11.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
11.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
11.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
11.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
11.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
11.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
11.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
11.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
11.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
10.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
10.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
10.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
10.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
10.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
10.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
10.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
10.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
10.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
10.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
10.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
10.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
10.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
10.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
10.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
9.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
9.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
9.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
9.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
9.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
9.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
9.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
9.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
9.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.1
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
8.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
8.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
8.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
8.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
8.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
8.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
8.7
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
8.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
8.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
8.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
8.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
8.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
8.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
8.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
8.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
7.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
7.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
7.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
7.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
7.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
7.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
7.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
7.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
7.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
7.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
6.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
6.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
6.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
6.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
6.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
6.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
6.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
5.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
5.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
5.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
5.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
5.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
5.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
5.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
5.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
4.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
4.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
4.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
4.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
4.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
4.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
4.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
4.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
4.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
3.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
3.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.8
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
3.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
3.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
3.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
3.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
2.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
2.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
1.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
1.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.1
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
1.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
0.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC24D is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
69.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
55.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
44.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
44.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
40.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
39.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
36.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
36.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
35.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
30.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
30.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
29.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
29.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
29.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
29.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
28.9
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
27.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
25.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
25.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
25.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
24.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
23.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
23.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
23.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
23.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
22.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
22.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
22.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
22.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
22.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
21.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
21.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
21.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
21.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
20.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
20.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
20.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
20.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
19.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
19.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
19.5
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
19.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
19.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
19.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
18.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
18.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
18.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
17.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
17.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
16.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
16.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
16.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
15.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
15.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
15.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
14.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
14.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
14.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
14.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
14.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
14.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
14.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
13.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
13.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
12.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
12.8
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
12.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
12.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
12.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
11.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
11.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
10.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
9.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
8.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
8.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
7.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
5.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SEC24D is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
43.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
36.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
34.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
27.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
26.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
26.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
25.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
23.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
22.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
21.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
21.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
21.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
21.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
21.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
20.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
20.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
20.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
20.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
19.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
19.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
19.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
19.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
18.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
18.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
18.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
17.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
17.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
17.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
16.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
15.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
15.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
15.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
15.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
15.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
15.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
15.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
15.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
14.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
14.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
14.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
14.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
14.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
14.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
14.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
13.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
13.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
13.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
13.4
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
12.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
12.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
12.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
12.3
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
12.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
12.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
11.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
11.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
11.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
11.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
11.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
10.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
10.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
10.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
10.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
10.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
10.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
10.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
9.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
9.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
9.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
9.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
9.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
9.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
9.7
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
9.6
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
9.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
9.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
9.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
9.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
9.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
9.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
8.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
8.9
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
8.8
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
8.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
8.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
8.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
8.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
8.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
8.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
8.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
8.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
8.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
8.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
8.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
8.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
8.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
7.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
7.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
7.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
7.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.7
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
7.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
7.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
7.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
7.4
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
7.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
7.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
7.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
7.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
7.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
7.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
7.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
7.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
6.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
6.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
6.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
6.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
6.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
6.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
6.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
6.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
6.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
6.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
6.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
6.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
6.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
6.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
6.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
6.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
6.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
6.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
6.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
6.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
5.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
5.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
5.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
5.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
5.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
5.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
5.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
5.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
5.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
5.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
5.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
5.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
5.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
5.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
5.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
5.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
5.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
5.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
5.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
5.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
4.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
4.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
4.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
4.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
4.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
4.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
4.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
4.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
4.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
4.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
4.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
4.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
4.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
4.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
4.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
4.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
4.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
4.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
3.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
3.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
3.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
3.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
3.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
3.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
3.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
3.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
3.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
3.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
3.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
3.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
3.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
3.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
2.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
2.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
2.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
2.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
2.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
2.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
2.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
2.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
2.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
2.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
1.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
1.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
1.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
1.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
1.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
1.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
1.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
1.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
1.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
1.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
1.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
1.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
1.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
1.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
1.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
1.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
0.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
1.4
CPT0012180003
Tumor
1.1
CPT0017850003
Tumor
1.0
CPT0086820003
Tumor
0.9
CPT0076330003
Tumor
0.8
CPT0023350003
Tumor
0.8
CPT0088690003
Tumor
0.8
CPT0012670003
Tumor
0.7
CPT0011240003
Tumor
0.7
CPT0001180009
Tumor
0.7
CPT0069160003
Tumor
0.7
CPT0084560003
Tumor
0.7
CPT0078800003
Tumor
0.7
CPT0081880003
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0007320003
Tumor
0.6
CPT0001260009
Tumor
0.6
CPT0075560003
Tumor
0.6
CPT0065430003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0081600003
Tumor
0.5
CPT0066480003
Tumor
0.5
CPT0010110003
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0092190003
Normal
0.5
CPT0001270001
Normal
0.5
CPT0014160003
Tumor
0.5
CPT0065870003
Tumor
0.4
CPT0081990003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0084590001
Normal
0.4
CPT0077320001
Normal
0.4
CPT0063630003
Tumor
0.4
CPT0079270003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0086030003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0086870003
Tumor
0.3
CPT0002270011
Tumor
0.3
CPT0065690003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0065750003
Tumor
0.2
CPT0015910003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0066470004
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0078990003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0025230003
Tumor
0.2
CPT0024670003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0025110003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0071150004
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0079180003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0086950003
Tumor
0.1
CPT0086360003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0088570001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0075570001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0018250001
Normal
0.0
CPT0014450004
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0065930003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0069190001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0025350003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0077310003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0025050003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0077490003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0086970003
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0024680001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0001500009
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0025060001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0089460004
Tumor
-0.2
CPT0010160003
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0012090003
Normal
-0.2
CPT0023360001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0077140001
Normal
-0.3
CPT0087040003
Tumor
-0.3
CPT0088710001
Normal
-0.3
CPT0078660003
Tumor
-0.3
CPT0012640003
Normal
-0.3
CPT0063330001
Normal
-0.3
CPT0006440003
Tumor
-0.3
CPT0066520001
Normal
-0.3
CPT0006630003
Tumor
-0.3
CPT0010170001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0064400001
Normal
-0.3
CPT0078940001
Normal
-0.3
CPT0009000003
Tumor
-0.3
CPT0000780007
Tumor
-0.4
CPT0078530001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0092740003
Normal
-0.4
CPT0081620001
Normal
-0.4
CPT0079300001
Normal
-0.4
CPT0019160001
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0006730001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0087050003
Normal
-0.4
CPT0092800003
Normal
-0.4
CPT0014350001
Normal
-0.4
CPT0078670001
Normal
-0.4
CPT0077500001
Normal
-0.5
CPT0025610001
Normal
-0.5
CPT0020130001
Normal
-0.5
CPT0066430001
Normal
-0.5
CPT0001230001
Normal
-0.5
CPT0001510001
Normal
-0.5
CPT0009080003
Normal
-0.5
CPT0088640003
Normal
-0.5
CPT0006950001
Normal
-0.5
CPT0086370003
Normal
-0.5
CPT0078840001
Normal
-0.5
CPT0012770003
Normal
-0.5
CPT0025920001
Normal
-0.5
CPT0065450001
Normal
-0.6
CPT0023710001
Normal
-0.6
CPT0000790001
Normal
-0.6
CPT0020020001
Normal
-0.6
CPT0089480003
Normal
-0.6
CPT0079000001
Normal
-0.6
CPT0088970003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
