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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDCD4 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
91.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
84.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
82.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
71.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
69.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
66.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
60.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
59.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
57.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
55.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
47.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
47.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
46.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
45.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
42.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
38.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
37.0
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
36.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
35.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
35.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
33.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
32.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
32.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
31.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
31.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
30.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
29.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
29.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
26.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
26.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
25.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
24.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
23.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
21.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
20.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
20.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
19.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
19.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
19.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
18.4
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
18.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
17.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
17.3
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
16.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
16.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
15.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
13.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
13.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
13.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
12.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
10.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
8.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
5.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
5.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDCD4 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
243.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
88.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
85.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
81.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
80.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
73.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
65.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
63.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
62.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
61.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
57.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
57.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
56.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
56.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
55.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
55.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
54.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
54.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
52.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
52.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
52.5
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
52.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
52.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
51.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
50.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
50.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
50.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
50.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
49.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
49.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
48.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
48.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
48.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
47.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
47.6
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
47.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
47.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
47.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
47.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
47.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
46.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
46.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
46.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
46.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
45.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
45.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
45.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
45.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
45.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
45.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
45.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
44.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
44.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
44.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
44.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
44.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
44.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
43.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
43.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
43.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
43.2
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
43.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
43.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
43.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
42.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
42.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
42.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
42.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
42.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
42.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
42.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
41.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
41.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
41.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
41.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
41.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
40.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
40.8
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
40.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
40.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
40.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
40.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
40.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
40.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
40.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
40.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
39.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
39.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
39.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
39.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
39.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
39.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
39.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
39.1
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
39.1
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
39.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
39.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
38.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
38.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
38.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
38.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
38.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
38.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
38.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
38.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
38.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
38.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
37.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
37.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
37.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
37.6
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
37.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
37.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
37.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
37.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
36.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
36.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
36.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
36.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
36.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
36.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
36.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
36.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
36.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
36.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
35.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
35.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
35.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
35.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
35.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
35.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
35.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
35.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
35.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
35.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
35.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
35.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
35.1
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
35.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
34.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
34.6
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
34.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
34.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
34.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
34.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
34.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
34.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
34.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
34.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
34.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
34.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
34.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
33.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
33.6
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
33.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
33.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
33.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
33.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
33.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
32.9
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
32.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
32.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
32.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
32.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
32.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
32.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
32.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
32.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
32.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
31.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
31.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
31.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
31.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
31.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
31.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
31.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
31.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
31.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
31.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
30.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
30.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
30.9
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
30.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
30.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
30.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
30.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
30.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
30.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
30.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
30.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
30.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
30.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
30.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
30.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
30.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
30.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
30.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
30.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
30.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
29.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
29.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
29.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
29.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
29.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
29.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
29.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
29.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
29.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
29.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
29.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
29.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
29.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
29.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
28.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
28.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
28.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
28.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
28.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
28.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
28.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
28.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
28.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
28.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
28.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
28.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
28.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
28.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
28.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
28.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
27.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
27.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
27.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
27.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
27.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
27.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
27.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
27.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
27.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
27.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
27.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
27.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
27.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
27.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
26.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
26.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
26.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
26.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
26.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
26.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
26.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
26.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
26.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
26.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
26.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
26.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
26.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
25.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
25.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
25.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
25.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
25.8
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
25.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
25.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
25.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
25.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
25.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
25.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
25.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
25.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
25.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
25.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
25.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
25.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
25.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
25.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
25.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
25.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
25.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
25.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
24.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
24.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
24.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
24.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
24.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
24.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
24.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
24.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
23.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
23.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
23.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
23.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
23.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
23.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
23.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
23.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
23.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
23.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
23.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
23.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
23.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
23.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
23.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
23.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
23.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
23.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
23.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
23.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
23.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
22.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
22.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
22.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
22.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
22.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
22.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
22.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
22.3
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
22.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
22.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
22.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
22.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
21.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
21.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
21.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
21.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
21.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
21.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
21.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
21.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
21.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
21.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
21.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
20.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
20.7
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
20.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
20.0
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
19.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
19.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
19.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
19.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
19.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
19.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
19.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
19.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
19.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.2
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
19.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
19.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
18.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
18.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
18.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
18.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
18.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
18.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
18.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
18.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
18.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
17.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
17.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
17.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
17.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
17.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
17.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
17.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
17.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
17.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
17.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
17.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
17.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
17.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
17.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
17.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
16.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
16.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
16.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
16.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
16.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
16.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
16.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
15.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
15.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
15.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
15.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
15.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
15.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
15.7
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
15.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
15.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
15.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
15.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
14.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
14.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
14.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
14.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
14.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
13.7
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
13.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
13.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
13.0
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
12.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
12.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
11.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
11.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
11.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.0
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
10.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.8
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
10.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
10.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
10.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
10.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
10.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
9.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
9.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.6
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
9.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.5
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
9.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
8.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
8.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
8.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
8.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
8.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
7.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
7.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
7.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
6.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
6.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
6.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
6.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
5.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDCD4 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
65.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
63.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
62.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
58.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
55.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
54.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
54.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
54.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
53.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
53.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
52.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
52.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
51.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
50.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
48.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
47.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
47.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
46.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
46.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
46.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
46.1
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
45.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
44.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
44.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
44.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
43.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
42.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
40.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
40.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
39.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
39.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
38.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
38.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
38.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
38.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
38.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
37.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
36.2
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
36.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
36.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
35.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
35.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
35.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
34.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
34.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
34.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
34.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
33.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
33.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
33.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
32.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
32.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
32.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
32.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
32.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
31.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
31.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
30.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
30.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
29.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
29.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
29.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
29.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
28.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
28.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
28.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
28.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
28.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
26.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
26.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
25.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
25.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
24.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
24.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
23.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
22.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
22.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
21.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
21.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
21.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
20.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
18.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
18.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
18.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
17.6
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
16.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
15.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
10.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PDCD4 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
109.4
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
94.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
87.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
70.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
70.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
68.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
64.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
62.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
61.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
53.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
51.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
50.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
49.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
43.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
42.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
40.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
40.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
39.2
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
38.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
37.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
37.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
37.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
37.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
35.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
33.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
33.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
32.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
32.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
31.9
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
31.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
30.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
30.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
30.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
29.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
28.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
28.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
28.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
28.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
28.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
28.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
27.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
27.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
26.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
25.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
25.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
25.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
25.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
25.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
25.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
25.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
25.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
25.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
25.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
24.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
24.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
24.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
24.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
24.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
23.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
23.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
23.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
23.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
22.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
22.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
22.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
22.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
22.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
22.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
22.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
22.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
21.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
21.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
20.9
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
20.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
20.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
20.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
20.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
20.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
20.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
20.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
20.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
20.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
19.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
19.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
19.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
19.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
18.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
18.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
18.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
18.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
18.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
18.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
18.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
18.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
18.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
17.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
17.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
17.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
17.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
17.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
17.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
16.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
16.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
16.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
16.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
16.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
16.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
16.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
15.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
15.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
15.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
15.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
14.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
14.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
14.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
14.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
14.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
14.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
14.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
14.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
13.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
13.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
13.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
13.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
13.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
13.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
13.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
13.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
13.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
13.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
13.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
12.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
12.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
12.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
12.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
12.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
12.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
11.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
11.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
11.7
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
11.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
11.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
10.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
10.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
10.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
10.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
10.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
10.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
10.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
10.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
10.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
9.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
9.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
9.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
9.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.5
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
9.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
9.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
9.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
9.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
8.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
8.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
8.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
8.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.3
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
8.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
8.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
7.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
7.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
7.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
7.3
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
7.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.9
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
6.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
6.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
6.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
6.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
6.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
6.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
6.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
6.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
6.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
6.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
5.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
5.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
5.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
5.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
5.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
5.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
5.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
5.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.0
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
5.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
5.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
4.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.6
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
4.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
4.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
4.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
3.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
3.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.3
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
2.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
2.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
2.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
1.5
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088970003
Tumor
1.3
CPT0088550004
Tumor
1.0
CPT0077320001
Normal
0.7
CPT0012180003
Tumor
0.7
CPT0092190003
Normal
0.6
CPT0079180003
Tumor
0.6
CPT0078990003
Tumor
0.6
CPT0014370004
Tumor
0.5
CPT0023690003
Tumor
0.5
CPT0001270001
Normal
0.5
CPT0012640003
Normal
0.5
CPT0012080003
Tumor
0.5
CPT0069190001
Normal
0.4
CPT0088570001
Normal
0.4
CPT0088760003
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0079300001
Normal
0.4
CPT0011410003
Tumor
0.4
CPT0014470001
Normal
0.4
CPT0075720003
Tumor
0.4
CPT0065820001
Normal
0.4
CPT0001230001
Normal
0.4
CPT0086870003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0012920003
Normal
0.3
CPT0010120001
Normal
0.3
CPT0025290003
Tumor
0.3
CPT0025170003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0012290003
Normal
0.3
CPT0079380003
Tumor
0.3
CPT0000660001
Normal
0.3
CPT0017850003
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0011240003
Tumor
0.3
CPT0026410003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0078510003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0066480003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0078660003
Tumor
0.2
CPT0025920001
Normal
0.2
CPT0015910003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0025110003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0002370001
Normal
0.2
CPT0088900003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0006440003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0075560003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0014350001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0020020001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0001180009
Tumor
0.1
CPT0078940001
Normal
0.1
CPT0001190001
Normal
0.1
CPT0006530001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0088710001
Normal
0.1
CPT0088500001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0086830003
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0002350011
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0077110003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0078670001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0084560003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0075170001
Normal
0.0
CPT0086360003
Tumor
0.0
CPT0012280003
Tumor
0.0
CPT0019160001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0001260009
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0021240003
Tumor
0.0
CPT0071150004
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0088480003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0086370003
Normal
-0.1
CPT0079410003
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0015810003
Tumor
-0.1
CPT0065810003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0086030003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0063320003
Tumor
-0.2
CPT0092800003
Normal
-0.2
CPT0007860003
Tumor
-0.2
CPT0001350001
Normal
-0.2
CPT0092310003
Normal
-0.2
CPT0066430001
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0000640003
Tumor
-0.2
CPT0086820003
Tumor
-0.2
CPT0065430003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0065750003
Tumor
-0.2
CPT0087050003
Normal
-0.2
CPT0088920001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0024670003
Tumor
-0.2
CPT0020120003
Tumor
-0.2
CPT0086970003
Normal
-0.3
CPT0076350001
Normal
-0.3
CPT0075130003
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0001340003
Tumor
-0.3
CPT0078840001
Normal
-0.3
CPT0081880003
Tumor
-0.3
CPT0063630003
Tumor
-0.3
CPT0012550003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0078930003
Tumor
-0.3
CPT0076330003
Tumor
-0.3
CPT0015730003
Tumor
-0.4
CPT0025230003
Tumor
-0.4
CPT0069160003
Tumor
-0.4
CPT0092290003
Tumor
-0.5
CPT0078830003
Tumor
-0.5
CPT0078800003
Tumor
-0.5
CPT0001500009
Tumor
-0.5
CPT0025060001
Normal
-0.6
CPT0025050003
Tumor
-0.6
CPT0086950003
Tumor
-0.7
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.