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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITGB1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
89.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
1015.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
267.8
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
186.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
181.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
179.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
171.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
117.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
113.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
110.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
109.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
104.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
103.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
100.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
100.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
99.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
99.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
93.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
90.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
90.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
80.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
79.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
78.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
78.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
76.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
73.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
73.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
72.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
71.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
67.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
66.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
66.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
65.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
65.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
64.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
62.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
61.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
60.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
59.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
59.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
57.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
55.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
54.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
53.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
52.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
51.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
51.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
49.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
49.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
48.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
47.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
47.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
46.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
45.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
43.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
40.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
35.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
34.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
31.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
29.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
24.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
19.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
7.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITGB1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
286.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1135.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
893.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
830.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
771.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
750.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
712.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
709.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
699.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
691.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
632.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
618.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
616.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
615.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
612.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
604.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
594.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
592.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
590.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
581.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
564.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
560.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
557.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
555.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
554.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
548.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
545.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
545.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
537.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
523.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
518.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
514.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
514.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
513.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
510.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
508.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
502.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
502.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
500.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
499.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
497.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
497.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
495.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
494.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
494.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
489.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
489.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
487.5
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
485.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
481.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
477.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
476.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
471.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
469.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
467.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
465.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
462.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
461.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
461.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
456.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
455.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
453.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
453.0
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
448.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
445.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
442.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
441.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
437.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
437.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
433.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
431.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
431.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
430.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
430.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
430.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
428.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
427.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
425.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
418.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
415.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
415.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
414.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
413.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
412.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
412.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
411.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
410.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
410.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
407.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
405.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
404.7
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
403.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
400.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
400.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
400.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
399.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
399.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
399.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
398.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
397.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
394.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
394.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
393.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
391.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
389.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
388.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
388.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
387.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
385.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
384.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
382.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
382.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
382.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
381.5
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
378.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
375.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
373.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
373.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
372.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
371.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
371.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
369.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
369.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
368.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
367.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
366.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
365.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
363.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
360.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
359.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
359.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
358.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
356.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
354.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
353.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
352.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
352.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
352.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
351.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
350.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
350.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
349.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
349.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
348.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
348.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
347.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
345.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
344.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
344.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
343.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
343.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
341.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
341.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
341.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
340.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
339.1
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
338.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
338.4
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
338.2
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
338.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
337.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
337.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
336.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
335.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
334.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
332.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
331.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
326.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
325.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
324.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
323.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
323.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
323.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
322.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
322.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
321.4
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
319.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
319.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
318.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
318.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
315.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
313.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
311.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
311.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
310.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
309.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
308.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
307.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
307.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
307.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
305.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
305.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
304.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
303.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
303.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
302.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
302.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
301.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
301.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
299.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
299.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
298.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
298.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
297.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
297.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
296.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
295.5
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
294.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
294.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
293.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
293.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
292.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
292.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
292.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
292.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
291.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
291.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
291.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
290.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
290.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
290.5
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
289.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
289.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
288.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
287.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
287.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
287.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
286.8
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
286.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
286.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
285.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
285.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
284.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
283.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
283.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
281.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
281.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
280.4
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
280.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
279.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
279.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
279.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
277.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
277.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
277.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
276.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
275.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
274.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
274.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
274.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
272.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
271.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
270.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
270.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
270.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
270.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
269.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
269.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
269.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
268.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
268.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
267.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
267.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
267.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
267.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
266.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
266.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
266.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
265.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
264.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
264.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
264.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
263.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
263.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
262.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
261.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
260.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
260.3
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
259.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
259.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
258.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
258.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
258.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
258.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
257.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
256.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
254.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
254.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
254.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
253.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
253.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
252.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
251.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
251.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
251.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
250.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
249.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
246.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
246.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
245.9
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
245.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
245.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
244.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
242.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
242.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
241.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
240.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
239.7
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
239.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
239.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
239.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
238.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
238.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
238.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
237.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
237.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
236.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
235.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
235.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
234.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
234.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
231.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
230.6
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
230.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
229.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
226.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
225.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
224.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
223.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
223.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
222.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
222.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
221.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
220.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
219.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
219.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
218.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
218.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
218.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
217.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
217.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
216.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
216.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
215.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
215.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
215.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
213.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
212.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
211.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
211.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
210.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
210.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
209.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
209.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
208.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
208.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
207.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
206.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
206.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
206.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
206.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
205.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
204.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
204.5
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
204.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
203.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
202.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
202.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
202.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
201.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
201.6
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
201.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
201.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
201.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
201.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
200.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
200.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
200.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
200.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
199.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
199.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
199.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
198.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
197.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
197.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
196.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
196.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
196.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
195.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
195.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
195.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
194.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
193.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
193.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
192.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
192.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
192.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
192.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
190.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
190.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
190.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
187.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
186.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
185.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
185.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
185.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
185.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
184.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
184.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
182.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
181.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
181.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
178.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
177.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
176.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
176.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
175.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
173.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
173.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
172.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
171.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
170.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
170.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
170.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
169.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
168.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
168.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
167.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
166.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
166.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
165.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
165.1
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
165.0
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
163.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
160.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
160.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
160.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
158.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
158.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
157.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
156.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
156.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
156.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
156.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
156.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
155.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
155.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
154.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
154.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
151.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
149.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
148.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
146.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
145.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
145.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
144.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
143.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
143.0
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
141.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
140.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
136.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
136.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
135.6
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
135.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
135.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
134.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
134.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
133.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
129.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
127.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
127.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
125.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
125.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
124.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
124.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
122.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
122.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
122.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
122.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
121.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
120.7
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
117.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
114.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
113.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
110.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
109.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
107.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
102.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
101.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
98.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
93.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
92.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
91.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
89.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
87.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
83.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
83.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
81.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
81.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
80.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
79.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
78.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
76.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
73.8
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
73.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
68.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
65.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
65.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
64.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
63.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
61.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
60.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
57.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
55.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
53.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
49.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
48.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
45.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
43.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
43.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
29.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITGB1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
352.2
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
943.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
779.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
682.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
682.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
654.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
580.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
570.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
561.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
536.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
518.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
516.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
509.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
502.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
480.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
480.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
478.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
455.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
437.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
437.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
427.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
424.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
421.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
416.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
407.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
406.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
405.8
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
401.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
400.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
392.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
390.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
388.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
385.7
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
384.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
383.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
382.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
380.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
378.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
375.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
372.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
372.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
367.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
366.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
365.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
364.2
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
363.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
362.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
353.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
350.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
347.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
336.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
333.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
331.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
329.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
327.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
320.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
320.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
314.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
312.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
312.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
311.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
309.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
308.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
307.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
304.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
295.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
294.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
293.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
292.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
279.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
272.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
272.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
272.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
270.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
269.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
266.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
261.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
261.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
261.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
253.4
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
249.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
248.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
237.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
236.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
227.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
224.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
222.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
219.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
216.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
215.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
203.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
189.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
187.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
181.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
158.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
157.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
147.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
138.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
118.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
112.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ITGB1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
167.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
892.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
694.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
558.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
532.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
521.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
483.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
467.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
425.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
416.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
410.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
408.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
405.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
366.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
362.8
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
351.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
349.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
339.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
337.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
335.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
334.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
333.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
326.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
325.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
319.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
319.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
314.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
313.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
309.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
307.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
306.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
303.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
292.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
292.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
291.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
289.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
287.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
278.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
278.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
278.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
277.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
277.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
275.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
273.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
272.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
269.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
267.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
259.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
250.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
250.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
250.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
245.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
244.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
242.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
240.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
234.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
232.2
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
231.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
229.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
229.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
227.7
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
227.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
226.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
226.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
225.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
225.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
224.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
223.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
220.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
219.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
218.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
217.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
216.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
215.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
212.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
212.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
212.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
211.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
210.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
207.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
202.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
201.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
201.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
201.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
200.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
199.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
198.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
197.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
197.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
194.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
193.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
190.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
190.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
186.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
185.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
184.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
184.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
183.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
180.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
178.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
177.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
176.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
175.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
174.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
174.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
174.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
172.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
171.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
170.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
168.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
167.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
167.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
163.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
162.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
161.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
159.6
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
158.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
157.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
157.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
156.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
156.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
155.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
153.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
153.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
152.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
151.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
151.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
150.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
148.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
145.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
144.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
143.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
143.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
143.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
142.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
142.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
142.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
141.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
141.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
140.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
140.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
139.4
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
139.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
138.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
137.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
135.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
135.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
135.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
134.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
134.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
134.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
133.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
133.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
132.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
131.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
131.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
129.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
129.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
127.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
127.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
127.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
127.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
126.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
125.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
125.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
125.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
124.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
124.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
123.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
122.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
122.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
122.1
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
122.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
120.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
120.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
119.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
118.9
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
118.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
118.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
117.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
117.5
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
117.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
116.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
115.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
114.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
114.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
113.8
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
113.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
112.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
111.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
109.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
108.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
108.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
108.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
108.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
107.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
105.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
105.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
104.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
102.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
102.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
101.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
100.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
100.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
100.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
99.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
98.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
98.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
97.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
95.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
94.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
94.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
93.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
92.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
91.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
91.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
91.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
90.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
90.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
89.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
86.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
86.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
85.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
84.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
82.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
82.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
81.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
80.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
79.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
79.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
78.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
78.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
77.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
77.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
76.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
76.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
75.8
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
73.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
73.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
70.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
70.6
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
69.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
66.0
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
65.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
64.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
62.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
61.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
61.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
60.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
60.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
59.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
59.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
59.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
54.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
53.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
53.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
53.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
51.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
51.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
51.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
50.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
50.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
49.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
48.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
48.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
45.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
44.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
43.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
42.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
42.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
42.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
41.4
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
39.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
35.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
34.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
34.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
32.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
29.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
29.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
26.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
25.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
15.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
7.2
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0084560003
Tumor
1.2
CPT0069000003
Tumor
0.9
CPT0000640003
Tumor
0.7
CPT0088630003
Tumor
0.7
CPT0078800003
Tumor
0.6
CPT0066480003
Tumor
0.5
CPT0009000003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0088760003
Tumor
0.3
CPT0001340003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0077140001
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0088900003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0082010001
Normal
0.3
CPT0010160003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0081880003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0092730003
Tumor
0.3
CPT0017450001
Normal
0.3
CPT0020130001
Normal
0.3
CPT0075720003
Tumor
0.3
CPT0065450001
Normal
0.2
CPT0025350003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0071150004
Tumor
0.2
CPT0025170003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0086950003
Tumor
0.2
CPT0001220008
Tumor
0.2
CPT0092310003
Normal
0.2
CPT0079480003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0023360001
Normal
0.2
CPT0013790003
Normal
0.2
CPT0088710001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0076330003
Tumor
0.2
CPT0023350003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0020020001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0069010001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0077500001
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0069190001
Normal
0.1
CPT0077310003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0012080003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0092800003
Normal
0.1
CPT0000790001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0063640001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0063320003
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0089040001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0014370004
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0012290003
Normal
0.1
CPT0088640003
Normal
0.1
CPT0018250001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0079380003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0012570003
Normal
0.0
CPT0010120001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0078530001
Normal
0.0
CPT0000870016
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0087050003
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0081600003
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0078830003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0065750003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0014160003
Tumor
-0.1
CPT0088920001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0009060003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0025880003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0065690003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0001260009
Tumor
-0.1
CPT0064400001
Normal
-0.2
CPT0025290003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0078990003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0012920003
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0009080003
Normal
-0.2
CPT0012180003
Tumor
-0.2
CPT0088970003
Tumor
-0.2
CPT0009020003
Normal
-0.2
CPT0012550003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0092290003
Tumor
-0.3
CPT0025110003
Tumor
-0.3
CPT0078510003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0086360003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0064370003
Tumor
-0.4
CPT0078660003
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0088550004
Tumor
-0.5
CPT0012900004
Tumor
-0.5
CPT0002270011
Tumor
-0.5
CPT0007860003
Tumor
-0.6
CPT0015730003
Tumor
-0.6
CPT0079180003
Tumor
-0.7
CPT0017410003
Tumor
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
