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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
B3GAT3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
134.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
107.5
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
101.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
77.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
75.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
73.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
70.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
70.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
69.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
67.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
67.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
66.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
61.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
59.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
59.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
56.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
56.3
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
55.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
55.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
55.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
54.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
53.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
53.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
53.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
51.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
51.8
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
51.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
50.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
50.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
49.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
48.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
48.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
47.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
47.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
47.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
46.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
46.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
45.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
45.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
44.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
44.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
43.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
43.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
42.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
41.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
40.9
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
40.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
40.6
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
38.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
38.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
37.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
35.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
33.9
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
33.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
33.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
32.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
31.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
29.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
28.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
22.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
17.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
16.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
14.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
B3GAT3 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
81.2
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
78.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
73.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
71.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
69.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
69.2
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
66.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
66.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
65.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
64.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
63.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
62.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
57.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
55.2
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
55.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
54.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
53.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
53.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
53.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
52.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
52.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
52.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
51.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
51.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
51.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
51.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
51.4
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
51.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
50.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
50.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
50.1
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
49.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
48.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
48.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
47.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
47.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
47.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
47.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
47.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
46.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
46.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
46.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
46.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
45.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
45.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
45.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
45.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
45.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
45.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
44.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
44.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
44.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
44.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
43.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
43.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
43.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
43.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
43.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
43.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
43.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
43.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
42.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
42.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
42.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
42.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
42.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
42.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
42.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
41.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
41.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
41.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
41.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
41.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
40.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
40.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
40.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
40.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
40.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
39.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
39.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
39.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
39.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
39.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
39.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
39.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
39.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
39.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
39.3
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
39.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
39.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
39.2
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
39.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
39.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
38.9
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
38.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
38.6
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
38.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
38.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
38.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
38.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
38.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
37.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
37.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
37.9
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
37.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
37.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
37.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
37.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
37.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
37.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
37.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
37.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
37.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
36.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
36.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
36.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
36.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
36.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
36.7
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
36.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
36.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
36.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
36.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
36.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
36.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
36.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
36.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
36.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
36.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
35.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
35.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
35.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
35.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
35.6
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
35.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
35.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
35.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
35.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
35.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
35.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
35.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
35.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
35.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
35.1
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
35.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
34.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
34.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
34.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
34.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
34.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
34.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
34.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
34.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
34.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
34.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
34.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
33.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
33.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
33.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
33.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
33.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
33.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
33.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
33.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
33.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
33.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
33.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
32.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
32.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
32.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
32.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
32.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
32.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
32.6
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
32.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
32.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
32.3
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
32.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
32.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
32.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
32.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
32.1
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
32.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
32.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
32.0
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
31.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
31.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
31.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
31.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
31.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
31.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
31.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
31.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
31.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
31.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
31.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
31.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
31.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
31.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
31.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
31.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
31.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
31.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
30.9
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
30.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
30.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
30.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
30.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
30.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
30.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
30.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
30.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
30.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
30.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
30.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
30.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
30.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
30.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
30.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
30.1
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
29.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
29.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
29.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
29.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
29.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
29.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
29.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
29.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
29.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
29.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
29.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
29.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
29.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
29.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
29.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
29.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
29.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
29.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
29.1
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
29.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
29.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
28.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
28.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
28.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
28.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
28.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
28.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
28.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
28.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
28.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
28.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
28.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
28.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
28.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
28.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
28.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
27.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
27.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
27.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
27.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
27.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
27.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
27.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
27.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
27.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
27.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
27.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
27.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
27.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
27.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
27.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
27.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
27.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
27.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
27.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
27.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
27.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
27.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
27.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
27.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
27.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
27.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
27.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
27.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
27.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
27.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
26.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
26.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
26.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
26.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
26.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
26.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
26.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
26.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
26.7
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
26.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
26.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
26.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
26.4
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
26.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
26.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
26.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
26.3
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
26.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
26.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
26.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
26.2
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
26.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
26.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
26.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
26.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
26.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
26.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
26.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
26.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
25.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
25.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
25.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
25.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
25.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
25.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
25.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
25.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
25.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
25.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
25.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
25.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
25.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
25.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
25.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
25.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
25.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
25.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
25.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
25.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
25.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
25.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
25.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
25.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
25.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
25.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
24.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
24.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
24.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
24.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
24.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
24.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
24.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
24.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
24.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
24.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
24.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
24.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
24.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
24.5
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
24.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
24.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
24.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
24.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
24.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
24.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
24.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
24.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
24.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
24.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
24.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
24.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
24.0
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
23.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
23.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
23.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
23.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
23.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
23.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
23.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
23.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
23.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
23.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
23.6
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
23.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
23.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
23.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
23.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
23.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
23.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
22.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
22.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
22.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
22.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
22.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
22.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
22.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
22.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
22.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
22.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
22.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
22.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
22.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
22.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
22.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
22.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
22.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
22.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
22.0
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
22.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
22.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
21.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
21.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
21.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
21.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
21.7
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
21.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
21.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
21.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
21.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
21.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
21.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
21.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
21.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
21.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
21.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
21.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
21.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
21.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.1
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
21.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
20.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
20.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
20.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
20.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
20.7
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
20.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
20.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
20.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
20.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
20.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
20.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
20.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
20.4
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
20.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
20.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
20.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
19.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
19.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
19.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
19.6
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
19.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
19.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
19.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
19.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
19.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
18.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
18.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
18.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
18.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
18.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
18.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
18.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
18.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
18.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
18.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
18.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
18.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
18.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
18.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
18.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
18.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
17.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
17.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
17.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
17.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
16.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
16.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
16.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
16.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
16.1
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
15.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
14.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
14.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
14.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
13.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
11.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
B3GAT3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
151.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
72.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
71.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
64.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
62.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
60.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
58.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
57.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
55.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
54.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
49.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
48.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
48.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
45.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
45.4
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
44.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
42.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
41.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
41.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
40.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
40.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
40.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
40.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
38.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
38.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
37.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
37.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
36.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
36.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
35.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
34.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
33.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
32.9
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
32.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
32.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
32.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
32.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
32.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
32.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
32.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
31.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.2
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
30.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
29.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.6
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
29.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
29.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
28.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
28.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
28.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
27.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
27.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
27.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
27.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
27.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
26.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
26.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
26.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
26.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
25.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
25.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
25.5
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
25.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
25.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
24.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
24.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
24.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
24.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
24.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
24.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
23.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
23.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
23.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
23.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
22.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
22.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
22.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
21.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
21.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
19.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
18.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
18.2
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
16.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
16.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
12.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
10.8
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
8.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
B3GAT3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
197.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
182.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
149.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
126.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
124.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
118.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
117.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
111.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
107.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
105.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
99.9
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
95.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
90.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
88.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
84.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
83.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
83.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
82.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
77.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
76.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
75.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
74.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
73.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
72.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
72.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
70.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
70.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
70.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
70.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
70.0
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
69.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
69.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
69.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
68.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
66.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
66.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
65.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
65.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
64.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
64.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
64.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
64.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
63.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
63.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
63.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
61.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
61.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
61.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
60.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
60.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
59.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
59.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
59.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
59.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
59.0
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
59.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
58.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
58.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
58.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
58.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
58.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
58.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
58.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
58.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
57.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
57.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
57.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
57.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
57.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
57.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
56.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
56.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
56.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
55.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
55.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
55.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
54.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
54.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
54.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
53.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
53.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
53.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
53.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
53.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
52.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
51.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
51.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
51.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
51.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
51.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
51.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
51.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
50.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
50.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
50.3
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
50.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
50.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
49.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
49.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
49.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
49.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
48.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
48.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
48.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
48.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
48.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
48.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
48.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
48.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
48.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
48.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
48.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
48.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
47.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
47.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
47.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
47.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
47.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
46.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
46.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
46.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
46.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
46.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
46.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
46.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
46.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
45.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
45.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
45.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
45.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
44.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
44.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
44.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
44.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
44.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
44.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
44.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
43.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
43.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
43.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
43.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
43.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
43.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
43.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
43.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
43.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
43.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
43.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
43.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
43.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
43.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
42.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
42.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
42.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
42.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
42.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
41.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
41.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
41.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
41.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
41.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
41.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
41.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
41.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
41.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
40.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
40.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
40.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
40.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
40.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
39.9
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
39.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
39.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
39.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
39.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
39.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
39.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
39.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
38.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
38.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
38.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
38.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
37.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
37.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
37.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
37.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
37.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
37.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
37.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
37.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
37.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
37.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
36.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
36.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
36.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
36.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
35.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
35.9
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
35.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
35.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
35.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
35.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
35.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
35.0
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
34.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
34.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
34.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
34.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
34.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
33.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
33.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
33.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
33.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
33.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
33.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
33.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
33.0
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
32.8
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
32.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
32.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
32.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
32.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
32.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
32.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
32.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
31.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
31.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
31.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
31.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
31.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
31.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
30.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
30.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
30.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
30.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
30.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
30.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
29.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
29.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
29.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
29.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
29.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
29.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
29.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
29.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
28.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
28.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
28.2
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
28.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
27.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
27.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
27.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
27.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
27.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
26.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
25.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
25.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
25.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
25.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
25.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
25.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
24.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
24.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
24.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
23.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
22.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
21.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
20.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
19.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
18.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.4
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
17.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
17.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
16.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.1
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
15.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
14.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
9.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
8.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
1.5
CPT0069160003
Tumor
1.2
CPT0063630003
Tumor
0.8
CPT0081880003
Tumor
0.8
CPT0001340003
Tumor
0.7
CPT0078660003
Tumor
0.7
CPT0084560003
Tumor
0.7
CPT0015730003
Tumor
0.7
CPT0020120003
Tumor
0.6
CPT0001180009
Tumor
0.6
CPT0014160003
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0079180003
Tumor
0.5
CPT0012280003
Tumor
0.4
CPT0002270011
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0025110003
Tumor
0.4
CPT0011410003
Tumor
0.4
CPT0088690003
Tumor
0.4
CPT0065690003
Tumor
0.3
CPT0078510003
Tumor
0.3
CPT0023350003
Tumor
0.3
CPT0014350001
Normal
0.3
CPT0088480003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0066470004
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0092290003
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0000790001
Normal
0.2
CPT0025920001
Normal
0.2
CPT0007860003
Tumor
0.2
CPT0065810003
Tumor
0.2
CPT0026420001
Normal
0.2
CPT0079410003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0081600003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0077500001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0065450001
Normal
0.1
CPT0025610001
Normal
0.1
CPT0001260009
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0077140001
Normal
0.1
CPT0023710001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0079000001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0012090003
Normal
0.1
CPT0088570001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0078840001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0079270003
Tumor
0.0
CPT0012550003
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0020130001
Normal
0.0
CPT0012770003
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0025060001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0006440003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0081620001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0001550001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0006730001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0001220008
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0079430001
Normal
0.0
CPT0069190001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0087040003
Tumor
-0.1
CPT0002350011
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0086950003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0012370003
Tumor
-0.1
CPT0025880003
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0092310003
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0012290003
Normal
-0.1
CPT0017850003
Tumor
-0.1
CPT0006630003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0086870003
Tumor
-0.2
CPT0064370003
Tumor
-0.2
CPT0078800003
Tumor
-0.2
CPT0086970003
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0012670003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0084590001
Normal
-0.2
CPT0012640003
Normal
-0.2
CPT0063320003
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0075560003
Tumor
-0.2
CPT0065870003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0010160003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0071150004
Tumor
-0.2
CPT0081990003
Tumor
-0.2
CPT0075720003
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0023690003
Tumor
-0.3
CPT0019130003
Tumor
-0.3
CPT0088550004
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0012570003
Normal
-0.3
CPT0079380003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0088970003
Tumor
-0.3
CPT0092740003
Normal
-0.3
CPT0025350003
Tumor
-0.3
CPT0076350001
Normal
-0.4
CPT0078990003
Tumor
-0.4
CPT0014450004
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0078930003
Tumor
-0.4
CPT0006900003
Tumor
-0.5
CPT0024680001
Normal
-0.6
CPT0009060003
Tumor
-0.7
CPT0017450001
Normal
-0.8
CPT0009080003
Normal
-0.8
CPT0011240003
Tumor
-0.9
CPT0009020003
Normal
-0.9
CPT0012920003
Normal
-1.0
CPT0012900004
Tumor
-1.1
CPT0017410003
Tumor
-1.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
