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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
45.3
nTPM
HPA Brain:
99.4
nTPM
GTEx:
45.3
nTPM
FANTOM5:
88.1
Scaled Tags Per Million
Pig:
46.7
nTPM
Mouse:
168.8
nTPM
Allen mouse:
1.9
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
99.4
Sample id
Sample description
nTPM
Amygdala nTPM: 99.4
1987
Female, age 91, left hemisphere
115.6
2814
Male, age 76, right hemisphere
107.3
2695
Female, age 67, right hemisphere
95.7
2514
Male, age 75, right hemisphere
92.8
2517
Female, age 94, left hemisphere
85.7
Basal amygdala nTPM: 82.1
2827
Female, age 67, right hemisphere
96.9
2110
Male, age 80, left hemisphere
92.6
1955
Male, age 76, both hemispheres
88.8
2609
Male, age 75, right hemisphere
83.4
2685
Female, age 94, left hemisphere
66.3
2243
Female, age 91, right hemisphere
64.7
Central amygdala nTPM: 96.0
2515
Male, age 75, right hemisphere
106.9
1905
Male, age 76, both hemispheres
102.8
2826
Female, age 94, left hemisphere
94.1
2239
Male, age 80, left hemisphere
90.5
2701
Female, age 91, right hemisphere
86.0
Corticomedial amygdala nTPM: 78.9
2242
Female, age 91, right hemisphere
87.5
2429
Female, age 94, left hemisphere
82.0
2829
Male, age 80, left hemisphere
80.2
2428
Male, age 75, right hemisphere
79.9
2240
Male, age 76, both hemispheres
72.5
2535
Female, age 67, right hemisphere
71.2
Lateral amygdala nTPM: 95.6
2830
Female, age 67, right hemisphere
104.7
2256
Male, age 80, left hemisphere
100.8
2516
Male, age 75, right hemisphere
98.7
2534
Female, age 94, left hemisphere
91.5
1883
Male, age 76, both hemispheres
90.6
2255
Female, age 91, right hemisphere
87.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
45.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 45.3
Samples: 152
Max nTPM: 121.4
Min nTPM: 13.5
Std nTPM: 14.3
Median nTPM: 44.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
121.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
85.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
75.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
72.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
71.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
69.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
69.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
68.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
67.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
67.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
66.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
65.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
65.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
65.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
65.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
64.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
64.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
63.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
61.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
61.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
61.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
60.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
58.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
57.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
57.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
57.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
57.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
56.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
56.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
56.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
56.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
56.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
55.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
55.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
54.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
53.2
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
52.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
52.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
52.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
52.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
52.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
51.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
51.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
51.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
51.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
50.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
50.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
50.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
50.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
49.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
49.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
49.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
48.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
48.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
48.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
48.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
47.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
47.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
47.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
47.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
47.6
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
47.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
46.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
46.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
46.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
46.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
45.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
45.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
45.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
45.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
45.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
45.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
45.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
44.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
44.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
44.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
44.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
44.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
44.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
44.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
44.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
44.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
43.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
43.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
42.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
42.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
42.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
42.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
41.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
41.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
40.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
40.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
40.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
40.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
39.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
39.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
39.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
38.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
38.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
38.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
38.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
38.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
38.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
38.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
37.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
37.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
37.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
37.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
37.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
37.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
36.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
36.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
36.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
36.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
35.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
35.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
34.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
34.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
34.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
34.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
34.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
34.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
33.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
33.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
33.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
33.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
33.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
33.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
32.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
32.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
31.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
31.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
30.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
29.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
29.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
29.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
28.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
28.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
27.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
27.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
27.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
25.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
25.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
24.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
23.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
22.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
22.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
22.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
21.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
19.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
18.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
13.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
168.8
Mouse sample
Sample description
nTPM
Amygdala nTPM: 168.9
Samples: 4
Max nTPM: 191.7
Min nTPM: 154.6
Sample A
Male
154.6
Sample B
Male
161.3
Sample C
Female
191.7
Sample D
Female
167.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.