We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERPING1 is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1022.9
Number of samples
362
Samples
Sample
Description
TPM
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
4641.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4257.5
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
4185.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
3232.6
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
3173.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
2886.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2834.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
2832.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
2723.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
2721.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
2665.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
2635.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
2565.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
2561.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
2488.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
2470.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
2465.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
2445.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
2443.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
2413.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
2405.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
2404.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
2392.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
2383.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
2337.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
2328.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
2322.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2316.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
2288.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
2285.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
2227.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
2222.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
2219.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
2188.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
2185.1
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
2158.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
2110.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
2104.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
2102.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
2090.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
2047.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1982.0
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1979.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
1978.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1975.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1963.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
1944.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
1942.3
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
1930.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1914.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1900.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1892.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1888.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
1882.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
1875.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1874.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1841.2
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1816.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
1803.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1773.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
1771.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
1768.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1749.7
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1746.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
1734.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
1681.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1670.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
1669.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1657.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1644.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
1616.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1609.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1596.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1580.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1564.3
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1548.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1535.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1522.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
1516.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1516.2
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
1511.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1470.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
1467.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1449.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
1447.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
1440.2
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
1437.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1430.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
1424.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1413.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
1396.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
1393.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
1382.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1379.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1372.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1369.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1369.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1361.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1360.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
1357.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1353.0
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
1340.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1329.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
1318.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1317.2
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1315.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1312.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
1295.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1290.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
1285.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1280.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
1278.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
1277.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1277.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1272.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1251.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1241.3
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
1241.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
1238.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
1231.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
1212.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1211.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1210.3
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1197.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
1184.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1180.8
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1159.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
1150.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
1147.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1144.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1137.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1136.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1136.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
1133.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1117.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
1110.4
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1097.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1085.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
1075.1
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
1072.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1071.1
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
1067.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1066.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
1063.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
1053.3
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
1045.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1042.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1023.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1023.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1020.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1011.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
1005.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1000.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
999.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
988.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
987.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
982.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
981.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
971.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
965.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
959.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
956.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
953.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
945.8
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
945.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
929.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
925.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
920.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
914.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
913.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
912.3
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
907.5
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
907.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
906.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
900.7
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
900.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
898.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
893.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
891.1
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
880.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
876.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
866.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
860.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
856.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
852.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
847.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
847.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
846.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
840.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
839.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
826.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
814.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
809.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
807.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
796.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
779.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
777.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
776.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
771.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
768.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
766.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
766.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
765.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
762.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
745.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
743.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
742.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
713.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
707.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
704.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
698.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
697.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
693.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
692.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
687.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
680.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
678.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
678.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
676.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
670.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
654.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
653.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
649.5
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
647.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
647.2
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
645.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
644.1
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
642.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
642.3
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
638.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
633.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
630.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
626.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
620.3
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
619.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
610.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
585.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
582.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
580.7
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
557.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
550.6
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
535.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
534.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
525.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
524.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
524.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
511.9
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
509.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
509.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
506.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
504.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
502.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
497.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
496.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
494.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
492.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
485.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
480.4
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
475.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
468.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
443.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
438.6
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
437.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
437.3
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
436.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
433.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
430.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
428.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
423.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
419.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
411.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
406.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
397.2
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
396.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
395.8
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
395.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
394.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
394.0
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
391.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
391.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
384.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
379.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
379.1
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
378.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
377.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
370.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
368.3
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
366.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
365.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
363.8
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
363.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
361.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
356.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
355.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
351.1
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
351.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
349.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
348.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
340.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
337.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
333.2
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
327.6
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
327.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
319.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
318.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
312.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
310.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
308.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
304.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
302.6
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
291.4
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
289.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
286.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
286.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
280.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
278.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
277.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
270.9
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
268.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
258.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
256.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
250.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
249.2
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
244.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
238.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
232.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
228.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
223.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
213.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
186.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
178.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
177.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
167.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
163.2
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
159.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
151.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
150.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
141.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
135.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
133.8
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
114.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
114.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
102.5
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
97.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
97.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
97.1
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
90.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
87.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
63.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
57.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
50.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
46.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
43.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
39.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
39.8
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
37.8
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
36.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
31.3
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
28.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
24.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
16.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SERPING1 is validated prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1105.3
Number of samples
231
Samples
Sample
Description
TPM
DO45094
0 years, male, NA, stage:3, alive, 1650 days
3235.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
3208.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2978.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
2853.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
2755.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
2587.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
2533.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
2513.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
2459.2
DO45111
0 years, male, NA, stage:2, alive, 1590 days
2363.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
2318.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
2293.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
2284.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2263.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
2163.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
2157.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
2136.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
2132.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
2118.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
2118.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
2093.5
DO23527
0 years, male, NA, stage:1, alive, 1050 days
2084.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
2041.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
2025.8
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1995.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
1979.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1904.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
1904.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
1898.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
1897.5
DO50825
0 years, male, NA, stage:2, alive, 390 days
1875.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
1852.9
DO45261
0 years, male, NA, stage:3, alive, 990 days
1845.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1845.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
1838.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
1794.4
DO48719
0 years, male, NA, stage:2, alive, 690 days
1775.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
1765.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
1740.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
1732.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
1732.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
1724.0
DO45171
0 years, male, NA, stage:3, alive, 600 days
1703.6
DO23543
0 years, male, NA, stage:2, alive, 1020 days
1694.0
DO45159
0 years, male, NA, stage:3, alive, 1470 days
1674.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
1669.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
1654.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
1651.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
1649.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
1644.1
DO48742
0 years, male, NA, stage:2, alive, 600 days
1633.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
1621.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1620.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
1614.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1609.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
1609.0
DO48679
0 years, male, NA, stage:2, alive, 1200 days
1545.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
1544.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
1543.6
DO45129
0 years, male, NA, stage:3, alive, 1470 days
1539.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
1531.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
1522.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
1521.8
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1509.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
1507.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
1503.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
1501.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1491.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
1490.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1486.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
1481.8
DO23514
0 years, male, NA, stage:2, alive, 1290 days
1476.9
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1459.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
1449.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
1442.7
DO23542
0 years, male, NA, stage:3, alive, 960 days
1439.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
1425.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
1372.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
1363.4
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1359.2
DO45201
0 years, male, NA, stage:1, alive, 900 days
1349.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
1331.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
1309.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
1292.0
DO50813
0 years, male, NA, stage:2, alive, 420 days
1265.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
1259.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
1248.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1245.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
1240.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
1234.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1218.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
1207.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
1202.4
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1187.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
1176.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
1164.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
1153.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
1149.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
1148.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
1148.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
1142.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
1141.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
1139.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
1134.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1118.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
1117.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
1108.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
1106.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
1102.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
1086.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
1083.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
1040.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
1030.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
1023.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
1011.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
1006.5
DO50805
0 years, male, NA, stage:2, alive, 690 days
994.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
978.1
DO48704
0 years, female, NA, stage:3, alive, 750 days
967.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
966.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
963.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
958.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
950.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
938.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
937.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
912.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
899.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
881.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
879.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
877.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
870.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
866.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
855.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
855.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
849.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
834.8
DO45213
0 years, male, NA, stage:1, alive, 1200 days
833.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
830.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
827.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
809.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
806.8
DO45191
0 years, female, NA, stage:2, alive, 1200 days
799.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
785.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
784.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
774.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
767.5
DO48682
0 years, female, NA, stage:3, dead, 120 days
758.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
744.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
742.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
739.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
736.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
732.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
717.6
DO45173
0 years, male, NA, stage:3, alive, 1170 days
710.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
707.8
DO45225
0 years, male, NA, stage:1, alive, 1050 days
704.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
704.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
693.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
684.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
684.1
DO45161
0 years, male, NA, stage:2, dead, 540 days
683.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
681.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
680.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
679.7
DO48701
0 years, male, NA, stage:2, alive, 780 days
677.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
672.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
639.2
DO48697
0 years, female, NA, stage:2, dead, 810 days
626.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
625.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
619.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
614.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
614.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
591.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
582.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
573.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
552.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
547.2
DO45155
0 years, male, NA, stage:2, alive, 2160 days
532.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
526.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
523.9
DO45105
0 years, male, NA, stage:1, alive, 1680 days
521.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
511.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
509.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
504.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
501.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
493.9
DO50855
0 years, male, NA, stage:2, alive, 570 days
491.1
DO45093
0 years, male, NA, stage:2, dead, 720 days
483.4
DO45289
0 years, female, NA, stage:3, alive, 360 days
473.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
471.6
DO45279
0 years, male, NA, stage:3, alive, 1290 days
470.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
444.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
418.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
412.8
DO45267
0 years, male, NA, stage:3, dead, 570 days
404.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
376.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
355.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
349.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
348.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
345.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
343.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
341.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
318.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
315.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
304.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
296.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
289.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
287.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
268.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
245.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
244.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
237.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
233.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
231.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
227.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
227.0
DO45189
0 years, female, NA, stage:2, alive, 1200 days
216.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
214.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
211.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
200.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
186.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
171.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
168.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
164.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
163.5
DO45193
0 years, female, NA, stage:4, dead, 120 days
134.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
121.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
104.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
64.7
DO45299
0 years, female, NA, stage:1, alive, 1440 days
27.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
21.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
343
Tumor
1.5
877
Tumor
1.5
425
Tumor
1.4
665
Tumor
1.3
113
Tumor
1.0
664
Normal
0.9
1015
Tumor
0.8
557
Tumor
0.8
635
Tumor
0.8
393
Tumor
0.8
636
Normal
0.8
863
Tumor
0.8
713
Tumor
0.8
395
Tumor
0.8
573
Tumor
0.8
217
Tumor
0.7
384
Normal
0.7
224
Normal
0.7
391
Tumor
0.7
396
Normal
0.7
392
Normal
0.7
112
Tumor
0.6
615
Tumor
0.6
671
Tumor
0.6
1041
Tumor
0.6
1045
Tumor
0.6
192
Normal
0.6
426
Normal
0.6
218
Normal
0.5
267
Tumor
0.5
884
Normal
0.5
368
Normal
0.5
618
Normal
0.5
444
Normal
0.5
857
Tumor
0.5
672
Normal
0.5
344
Normal
0.4
375
Tumor
0.4
1022
Normal
0.4
785
Tumor
0.4
376
Normal
0.4
937
Tumor
0.4
451
Tumor
0.4
981
Tumor
0.4
741
Tumor
0.4
445
Tumor
0.4
686
Normal
0.4
666
Normal
0.4
354
Normal
0.4
342
Normal
0.4
125
Tumor
0.4
135
Tumor
0.4
616
Normal
0.4
452
Normal
0.4
297
Tumor
0.4
468
Normal
0.3
866
Normal
0.3
433
Tumor
0.3
232
Normal
0.3
648
Normal
0.3
332
Normal
0.3
394
Normal
0.3
388
Normal
0.3
464
Normal
0.3
358
Normal
0.3
414
Normal
0.3
697
Tumor
0.3
286
Normal
0.3
574
Normal
0.3
142
Normal
0.3
975
Tumor
0.3
424
Normal
0.3
744
Normal
0.3
141
Tumor
0.3
132
Normal
0.3
467
Tumor
0.3
696
Normal
0.3
813
Tumor
0.3
536
Normal
0.3
778
Normal
0.3
958
Normal
0.3
456
Normal
0.3
228
Normal
0.3
353
Tumor
0.3
148
Normal
0.3
195
Tumor
0.3
187
Tumor
0.3
172
Normal
0.3
642
Normal
0.3
883
Tumor
0.3
816
Normal
0.3
423
Tumor
0.3
365
Tumor
0.3
124
Normal
0.3
352
Normal
0.2
466
Normal
0.2
723
Tumor
0.2
366
Normal
0.2
284
Normal
0.2
432
Normal
0.2
954
Normal
0.2
421
Tumor
0.2
422
Normal
0.2
568
Normal
0.2
535
Tumor
0.2
662
Normal
0.2
628
Normal
0.2
818
Normal
0.2
367
Tumor
0.2
446
Normal
0.2
428
Normal
0.2
386
Normal
0.2
873
Tumor
0.2
261
Tumor
0.2
514
Normal
0.2
647
Tumor
0.2
145
Tumor
0.2
914
Normal
0.2
817
Tumor
0.2
114
Normal
0.2
455
Tumor
0.2
111
Normal
0.2
558
Normal
0.2
196
Normal
0.2
745
Tumor
0.2
298
Normal
0.2
487
Tumor
0.2
1046
Normal
0.2
262
Normal
0.2
563
Tumor
0.2
188
Normal
0.2
823
Tumor
0.2
564
Normal
0.2
268
Normal
0.2
131
Tumor
0.2
742
Normal
0.2
526
Normal
0.1
1044
Normal
0.1
222
Normal
0.1
283
Tumor
0.1
327
Tumor
0.1
162
Normal
0.1
714
Normal
0.1
138
Normal
0.1
1028
Normal
0.1
968
Normal
0.1
722
Normal
0.1
746
Normal
0.1
498
Normal
0.1
491
Tumor
0.1
314
Normal
0.1
258
Normal
0.1
878
Normal
0.1
786
Normal
0.1
136
Normal
0.1
312
Normal
0.1
852
Normal
0.1
361
Tumor
0.1
538
Normal
0.1
462
Normal
0.1
517
Tumor
0.1
527
Tumor
0.1
221
Tumor
0.1
924
Normal
0.1
956
Normal
0.1
824
Normal
0.1
1026
Normal
0.1
627
Tumor
0.1
465
Tumor
0.1
815
Tumor
0.1
488
Normal
0.1
137
Tumor
0.1
494
Normal
0.1
1016
Normal
0.1
146
Normal
0.1
434
Normal
0.1
716
Normal
0.1
311
Tumor
0.1
362
Normal
0.1
524
Normal
0.1
492
Normal
0.1
126
Normal
0.1
572
Normal
0.1
191
Tumor
0.1
214
Normal
0.1
964
Normal
0.1
728
Normal
0.1
383
Tumor
0.1
721
Tumor
0.1
448
Normal
0.0
882
Normal
0.0
868
Normal
0.0
756
Normal
0.0
944
Normal
0.0
963
Tumor
0.0
186
Normal
0.0
851
Tumor
0.0
755
Tumor
0.0
331
Tumor
0.0
364
Normal
0.0
862
Normal
0.0
982
Normal
0.0
212
Normal
0.0
278
Normal
0.0
912
Normal
0.0
447
Tumor
0.0
515
Tumor
0.0
938
Normal
0.0
227
Tumor
0.0
864
Normal
0.0
953
Tumor
0.0
387
Tumor
0.0
977
Tumor
0.0
861
Tumor
0.0
967
Tumor
0.0
874
Normal
0.0
814
Normal
0.0
128
Normal
0.0
546
Normal
0.0
617
Tumor
0.0
363
Tumor
0.0
223
Tumor
0.0
356
Normal
0.0
858
Normal
0.0
461
Tumor
0.0
695
Tumor
0.0
436
Normal
0.0
528
Normal
-0.1
918
Normal
-0.1
523
Tumor
-0.1
478
Normal
-0.1
484
Normal
-0.1
472
Normal
-0.1
482
Normal
-0.1
443
Tumor
-0.1
554
Normal
-0.1
477
Tumor
-0.1
481
Tumor
-0.1
516
Normal
-0.1
922
Normal
-0.1
777
Tumor
-0.1
518
Normal
-0.1
966
Normal
-0.1
917
Tumor
-0.1
185
Tumor
-0.1
1042
Normal
-0.1
916
Normal
-0.1
738
Normal
-0.1
926
Normal
-0.1
1032
Normal
-0.1
913
Tumor
-0.1
743
Tumor
-0.1
978
Normal
-0.1
328
Normal
-0.1
534
Normal
-0.1
1043
Tumor
-0.1
474
Normal
-0.1
685
Tumor
-0.1
1014
Normal
-0.1
431
Tumor
-0.2
571
Tumor
-0.2
984
Normal
-0.2
955
Tumor
-0.2
545
Tumor
-0.2
471
Tumor
-0.2
976
Normal
-0.2
553
Tumor
-0.2
341
Tumor
-0.2
641
Tumor
-0.2
698
Normal
-0.2
127
Tumor
-0.2
416
Normal
-0.2
911
Tumor
-0.2
513
Tumor
-0.2
867
Tumor
-0.2
412
Normal
-0.2
213
Tumor
-0.2
663
Tumor
-0.2
952
Normal
-0.2
915
Tumor
-0.2
272
Normal
-0.3
661
Tumor
-0.3
257
Tumor
-0.3
147
Tumor
-0.3
715
Tumor
-0.3
1027
Tumor
-0.3
463
Tumor
-0.3
737
Tumor
-0.3
1021
Tumor
-0.3
881
Tumor
-0.3
161
Tumor
-0.3
413
Tumor
-0.3
351
Tumor
-0.3
385
Tumor
-0.3
525
Tumor
-0.3
415
Tumor
-0.4
483
Tumor
-0.4
357
Tumor
-0.4
435
Tumor
-0.4
727
Tumor
-0.4
925
Tumor
-0.4
313
Tumor
-0.4
983
Tumor
-0.4
277
Tumor
-0.4
285
Tumor
-0.5
1025
Tumor
-0.5
271
Tumor
-0.5
923
Tumor
-0.5
567
Tumor
-0.5
411
Tumor
-0.6
943
Tumor
-0.6
493
Tumor
-0.6
171
Tumor
-0.6
865
Tumor
-0.6
724
Normal
-0.6
921
Tumor
-0.7
123
Tumor
-0.7
355
Tumor
-0.7
497
Tumor
-0.7
427
Tumor
-0.8
957
Tumor
-0.8
537
Tumor
-0.8
1031
Tumor
-0.8
1013
Tumor
-0.8
951
Tumor
-0.9
231
Tumor
-0.9
965
Tumor
-0.9
211
Tumor
-1.0
533
Tumor
-1.1
473
Tumor
-1.2
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.