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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
4.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
2.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
2.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
2.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
0.2
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
0.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GLYAT is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
66.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
349.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
340.2
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
250.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
249.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
234.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
228.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
208.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
207.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
205.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
201.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
194.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
184.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
183.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
180.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
175.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
173.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
171.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
170.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
170.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
170.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
169.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
166.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
165.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
162.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
159.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
158.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
157.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
157.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
154.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
151.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
149.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
149.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
149.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
148.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
147.7
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
147.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
147.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
147.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
144.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
143.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
142.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
141.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
140.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
140.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
137.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
136.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
135.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
135.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
134.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
132.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
132.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
131.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
131.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
129.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
129.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
128.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
128.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
128.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
127.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
127.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
126.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
126.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
124.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
123.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
122.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
122.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
122.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
121.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
121.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
119.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
119.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
118.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
117.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
117.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
116.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
116.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
115.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
114.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
114.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
113.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
113.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
112.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
112.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
111.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
111.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
111.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
111.5
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
111.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
111.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
111.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
111.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
110.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
110.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
109.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
108.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
107.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
107.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
107.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
107.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
106.8
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
106.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
106.1
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
105.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
105.3
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
104.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
104.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
104.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
104.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
103.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
103.5
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
102.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
102.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
102.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
102.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
102.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
101.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
101.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
101.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
100.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
100.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
99.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
98.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
98.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
97.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
97.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
97.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
97.3
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
95.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
94.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
94.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
94.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
94.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
93.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
92.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
91.5
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
91.0
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
90.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
89.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
89.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
89.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
88.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
88.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
87.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
87.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
87.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
87.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
86.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
86.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
86.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
85.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
85.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
85.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
85.2
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
85.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
84.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
84.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
84.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
84.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
84.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
84.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
84.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
83.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
83.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
82.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
82.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
82.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
82.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
81.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
81.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
81.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
81.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
81.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
80.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
80.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
80.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
80.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
79.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
79.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
79.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
79.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
78.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
78.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
78.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
78.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
78.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
78.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
77.9
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
77.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
77.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
77.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
77.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
76.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
76.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
76.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
76.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
76.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
76.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
76.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
75.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
75.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
75.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
74.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
74.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
74.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
74.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
74.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
73.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
73.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
73.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
73.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
72.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
72.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
72.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
72.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
71.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
71.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
71.6
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
71.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
71.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
71.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
71.2
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
71.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
71.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
70.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
69.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
69.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
69.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
69.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
69.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
69.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
69.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
68.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
68.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
68.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
68.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
67.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
66.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
66.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
66.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
66.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
65.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
64.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
63.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
63.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
62.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
61.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
61.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
61.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
61.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
61.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
61.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
61.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
61.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
61.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
61.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
60.7
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
60.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
60.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
60.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
59.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
59.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
59.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
59.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
58.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
58.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
58.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
58.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
58.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
58.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
58.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
57.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
57.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
57.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
57.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
57.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
57.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
56.8
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
56.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
56.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
56.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
55.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
55.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
55.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
54.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
54.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
54.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
54.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
54.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
53.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
53.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
53.2
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
53.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
52.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
52.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
52.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
51.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
51.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
51.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
51.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
51.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
51.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
51.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
50.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
50.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
50.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
50.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
50.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
49.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
49.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
49.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
48.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
48.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
47.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
47.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
46.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
46.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
46.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
46.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
46.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
46.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
45.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
45.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
45.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
45.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
44.8
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
44.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
44.0
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
43.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
43.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
43.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
43.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
43.3
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
43.1
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
42.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
42.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
42.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
41.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
41.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
41.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
41.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
41.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
41.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
41.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
40.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
40.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
40.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
39.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
39.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
39.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
38.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
38.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
38.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
38.3
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
37.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
37.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
36.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
36.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
36.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
36.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
36.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
36.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
36.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
36.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
36.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
36.0
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
35.9
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
35.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
35.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
35.1
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
35.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
34.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
34.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
34.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
34.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
34.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
33.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
33.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
33.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
33.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
32.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
32.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
32.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
32.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
32.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
32.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
32.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
31.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
30.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
30.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
30.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
29.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
29.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
29.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
29.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
28.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
27.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
27.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
27.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
27.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
26.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
26.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
26.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
25.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
25.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
25.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
25.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
25.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
25.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
24.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
24.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
23.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
22.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
22.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
22.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
22.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
22.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
21.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
21.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.1
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
21.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
20.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
19.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
18.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
18.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
17.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
17.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
16.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
16.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
16.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
15.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
14.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
13.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
13.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
13.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
13.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
12.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
11.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.9
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
10.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
8.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
8.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
7.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
6.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
6.6
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
5.9
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
5.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
5.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
5.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
4.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
3.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
2.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
2.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
1.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
1.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
1.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
1.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
1.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
1.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
0.8
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
0.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
0.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
0.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
0.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
0.5
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
0.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
0.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
0.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
0.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
0.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
0.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
0.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
0.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
0.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
0.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
0.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
0.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
0.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
0.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
0.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
0.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
0.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
0.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.0
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
0.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GLYAT is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
77.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
229.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
204.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
197.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
182.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
182.5
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
182.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
176.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
175.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
170.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
161.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
152.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
145.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
145.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
143.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
137.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
132.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
132.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
129.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
128.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
125.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
119.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
118.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
116.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
115.6
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
114.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
113.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
108.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
108.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
108.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
102.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
101.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
96.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
93.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
93.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
91.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
90.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
88.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
87.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
87.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
85.1
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
82.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
80.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
79.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
78.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
78.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
76.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
75.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
74.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
73.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
73.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
73.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
72.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
70.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
69.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
68.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
67.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
60.4
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
57.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
57.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
54.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
54.1
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
51.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
49.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
47.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
46.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
46.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
45.6
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
45.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
44.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
42.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
41.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
38.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
38.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
35.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
35.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
34.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
32.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
30.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
30.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
29.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
27.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
26.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
26.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
19.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
16.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
14.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
13.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
12.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
10.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
10.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
6.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
5.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
1.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GLYAT is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
124.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
649.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
592.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
504.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
460.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
387.5
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
376.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
359.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
357.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
341.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
340.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
335.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
329.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
324.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
314.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
314.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
312.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
305.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
296.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
288.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
287.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
286.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
282.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
271.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
269.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
268.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
266.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
262.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
261.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
256.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
250.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
247.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
246.7
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
245.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
245.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
244.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
242.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
242.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
241.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
240.3
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
238.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
237.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
234.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
230.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
228.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
227.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
224.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
221.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
219.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
213.7
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
213.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
205.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
199.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
191.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
189.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
188.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
185.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
183.9
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
183.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
183.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
180.7
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
179.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
176.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
176.5
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
176.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
175.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
174.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
174.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
173.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
169.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
168.7
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
168.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
168.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
167.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
167.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
164.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
161.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
160.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
157.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
157.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
156.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
155.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
154.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
154.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
151.8
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
150.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
149.2
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
149.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
148.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
148.0
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
147.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
146.6
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
146.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
146.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
145.2
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
144.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
143.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
143.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
143.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
143.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
143.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
143.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
141.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
141.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
140.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
140.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
140.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
139.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
138.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
138.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
137.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
135.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
135.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
134.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
134.2
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
134.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
132.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
131.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
130.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
129.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
129.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
128.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
128.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
128.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
127.2
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
126.2
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
123.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
119.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
119.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
119.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
118.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
118.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
118.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
117.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
117.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
116.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
116.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
115.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
115.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
113.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
113.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
113.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
111.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
111.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
109.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
109.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
108.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
108.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
108.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
107.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
106.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
105.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
104.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
103.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
102.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
102.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
101.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
100.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
97.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
95.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
95.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
95.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
94.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
93.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
93.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
92.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
92.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
91.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
91.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
90.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
89.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
88.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
88.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
88.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
87.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
87.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
87.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
85.3
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
83.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
82.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
81.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
81.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
80.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
80.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
79.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
79.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
77.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
76.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
76.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
75.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
74.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
72.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
72.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
71.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
70.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
70.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
69.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
68.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
67.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
67.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
66.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
66.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
65.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
63.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
61.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
58.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
56.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
56.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
56.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
55.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
55.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
54.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
51.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
50.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
50.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
48.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
47.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
47.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
42.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
41.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
41.1
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
37.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
37.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
37.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
35.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
32.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
32.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
31.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
30.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
29.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
29.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
24.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
22.1
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
21.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
20.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
20.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
15.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
12.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
12.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
11.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
9.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
8.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
6.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
4.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
3.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
3.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
1.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
1.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
0.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
0.7
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
0.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
0.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
0.6
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
0.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
0.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
0.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
0.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
0.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
0.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
0.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
0.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
0.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0065450001
Normal
1.3
CPT0088780001
Normal
1.3
CPT0006950001
Normal
1.2
CPT0012770003
Normal
1.2
CPT0009080003
Normal
1.2
CPT0092800003
Normal
1.1
CPT0077140001
Normal
1.1
CPT0026420001
Normal
1.1
CPT0092740003
Normal
1.1
CPT0088920001
Normal
1.0
CPT0012090003
Normal
1.0
CPT0089480003
Normal
1.0
CPT0000790001
Normal
1.0
CPT0081620001
Normal
1.0
CPT0013790003
Normal
1.0
CPT0079000001
Normal
1.0
CPT0012570003
Normal
0.9
CPT0014350001
Normal
0.9
CPT0006730001
Normal
0.9
CPT0010170001
Normal
0.9
CPT0025610001
Normal
0.9
CPT0078840001
Normal
0.9
CPT0023710001
Normal
0.9
CPT0092310003
Normal
0.9
CPT0077500001
Normal
0.9
CPT0078670001
Normal
0.9
CPT0001350001
Normal
0.9
CPT0066430001
Normal
0.8
CPT0025060001
Normal
0.8
CPT0086370003
Normal
0.8
CPT0087050003
Normal
0.8
CPT0020020001
Normal
0.8
CPT0020130001
Normal
0.8
CPT0082010001
Normal
0.8
CPT0086890003
Normal
0.8
CPT0000890001
Normal
0.8
CPT0069010001
Normal
0.8
CPT0007870001
Normal
0.8
CPT0064400001
Normal
0.7
CPT0012290003
Normal
0.7
CPT0088500001
Normal
0.7
CPT0079430001
Normal
0.7
CPT0023360001
Normal
0.7
CPT0078530001
Normal
0.7
CPT0063640001
Normal
0.7
CPT0076350001
Normal
0.7
CPT0007470001
Normal
0.7
CPT0086970003
Normal
0.7
CPT0088710001
Normal
0.7
CPT0089040001
Normal
0.6
CPT0078940001
Normal
0.6
CPT0018250001
Normal
0.5
CPT0014130001
Normal
0.5
CPT0017450001
Normal
0.5
CPT0019160001
Normal
0.5
CPT0065820001
Normal
0.5
CPT0012920003
Normal
0.5
CPT0063330001
Normal
0.5
CPT0014470001
Normal
0.4
CPT0088640003
Normal
0.4
CPT0075570001
Normal
0.4
CPT0002270011
Tumor
0.4
CPT0088570001
Normal
0.4
CPT0009020003
Normal
0.4
CPT0024680001
Normal
0.3
CPT0066520001
Normal
0.3
CPT0025920001
Normal
0.3
CPT0001510001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0001190001
Normal
0.2
CPT0000660001
Normal
0.2
CPT0006530001
Normal
0.2
CPT0002370001
Normal
0.1
CPT0001550001
Normal
0.1
CPT0001230001
Normal
-0.1
CPT0010120001
Normal
-0.3
CPT0001500009
Tumor
-0.3
CPT0012640003
Normal
-0.4
CPT0075170001
Normal
-0.4
CPT0012900004
Tumor
-0.4
CPT0001270001
Normal
-0.4
CPT0077310003
Tumor
-0.5
CPT0019990003
Tumor
-0.6
CPT0092290003
Tumor
-0.6
CPT0078510003
Tumor
-0.6
CPT0069190001
Normal
-0.6
CPT0014160003
Tumor
-0.7
CPT0078800003
Tumor
-0.7
CPT0066470004
Tumor
-0.8
CPT0089460004
Tumor
-0.8
CPT0064370003
Tumor
-0.8
CPT0063320003
Tumor
-0.8
CPT0025170003
Tumor
-0.8
CPT0000780007
Tumor
-0.8
CPT0066480003
Tumor
-0.8
CPT0079510001
Normal
-0.9
CPT0020120003
Tumor
-0.9
CPT0024670003
Tumor
-0.9
CPT0078930003
Tumor
-0.9
CPT0087040003
Tumor
-0.9
CPT0025050003
Tumor
-0.9
CPT0079300001
Normal
-0.9
CPT0088970003
Tumor
-0.9
CPT0006900003
Tumor
-1.0
CPT0077320001
Normal
-1.0
CPT0011240003
Tumor
-1.0
CPT0015910003
Tumor
-1.0
CPT0023690003
Tumor
-1.1
CPT0007860003
Tumor
-1.1
CPT0001220008
Tumor
-1.1
CPT0079480003
Tumor
-1.1
CPT0009060003
Tumor
-1.1
CPT0075720003
Tumor
-1.1
CPT0000640003
Tumor
-1.1
CPT0009000003
Tumor
-1.1
CPT0089020003
Tumor
-1.1
CPT0084590001
Normal
-1.1
CPT0012280003
Tumor
-1.2
CPT0006440003
Tumor
-1.2
CPT0088480003
Tumor
-1.2
CPT0065430003
Tumor
-1.2
CPT0075560003
Tumor
-1.2
CPT0092190003
Normal
-1.2
CPT0092790003
Tumor
-1.2
CPT0023350003
Tumor
-1.2
CPT0012550003
Tumor
-1.2
CPT0076330003
Tumor
-1.3
CPT0071150004
Tumor
-1.3
CPT0021240003
Tumor
-1.3
CPT0086360003
Tumor
-1.3
CPT0001540009
Tumor
-1.3
CPT0088760003
Tumor
-1.3
CPT0006630003
Tumor
-1.3
CPT0092160003
Tumor
-1.3
CPT0065810003
Tumor
-1.3
CPT0088690003
Tumor
-1.3
CPT0019130003
Tumor
-1.3
CPT0081990003
Tumor
-1.4
CPT0007320003
Tumor
-1.4
CPT0014370004
Tumor
-1.4
CPT0026410003
Tumor
-1.4
CPT0078830003
Tumor
-1.4
CPT0088900003
Tumor
-1.4
CPT0012670003
Tumor
-1.4
CPT0079410003
Tumor
-1.4
CPT0063630003
Tumor
-1.4
CPT0014450004
Tumor
-1.4
CPT0088630003
Tumor
-1.5
CPT0025580004
Tumor
-1.5
CPT0000870016
Tumor
-1.5
CPT0002350011
Tumor
-1.5
CPT0077490003
Tumor
-1.5
CPT0010160003
Tumor
-1.5
CPT0017410003
Tumor
-1.5
CPT0001260009
Tumor
-1.5
CPT0012370003
Tumor
-1.5
CPT0010110003
Tumor
-1.5
CPT0086870003
Tumor
-1.6
CPT0069000003
Tumor
-1.6
CPT0086820003
Tumor
-1.6
CPT0081600003
Tumor
-1.6
CPT0079270003
Tumor
-1.6
CPT0025880003
Tumor
-1.6
CPT0086950003
Tumor
-1.6
CPT0015730003
Tumor
-1.7
CPT0079180003
Tumor
-1.7
CPT0092730003
Tumor
-1.7
CPT0065870003
Tumor
-1.7
CPT0069160003
Tumor
-1.7
CPT0012080003
Tumor
-1.7
CPT0025110003
Tumor
-1.8
CPT0001180009
Tumor
-1.8
CPT0075130003
Tumor
-1.8
CPT0077110003
Tumor
-1.8
CPT0017850003
Tumor
-1.9
CPT0015810003
Tumor
-1.9
CPT0078660003
Tumor
-1.9
CPT0012180003
Tumor
-1.9
CPT0088550004
Tumor
-1.9
CPT0084560003
Tumor
-2.0
CPT0086030003
Tumor
-2.0
CPT0078990003
Tumor
-2.0
CPT0001340003
Tumor
-2.0
CPT0065930003
Tumor
-2.0
CPT0025230003
Tumor
-2.0
CPT0065750003
Tumor
-2.2
CPT0025290003
Tumor
-2.2
CPT0065690003
Tumor
-2.2
CPT0081880003
Tumor
-2.4
CPT0025350003
Tumor
-2.6
CPT0079230003
Tumor
-2.6
CPT0079380003
Tumor
-2.6
CPT0085670003
Tumor
-2.8
CPT0011410003
Tumor
-3.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
