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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
134.8
nTPM
GTEx:
134.8
nTPM
FANTOM5:
1789.8
Scaled Tags Per Million
Pig:
243.1
nTPM
Mouse:
65.6
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
134.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 134.8
Samples: 105
Max nTPM: 341.8
Min nTPM: 41.5
Std nTPM: 63.6
Median nTPM:
379_1
60 years, male
341.8
173_1
67 years, male
324.5
350_1
84 years, female
321.1
218_1
71 years, female
309.0
295_1
61 years, female
300.8
386_1
76 years, male
259.2
447_1
81 years, male
242.5
506_1
65 years, male
231.5
356_1
87 years, female
229.1
137_1
83 years, male
227.6
109_1
81 years, female
226.8
349_1
83 years, male
206.1
452_1
88 years, female
204.5
4_1
88 years, female
200.3
384_1
83 years, male
198.7
317_1
60 years, male
193.1
351_1
91 years, male
192.6
518_1
75 years, female
188.0
145_1
84 years, male
183.4
318_1
68 years, male
181.4
316_1
62 years, male
179.5
314_1
67 years, male
177.1
163_1
78 years, male
175.4
120_1
70 years, female
174.9
17_1
71 years, male
173.6
335_1
73 years, female
172.2
291_1
76 years, male
169.7
347_1
72 years, male
169.1
354_1
81 years, female
169.0
321_1
62 years, female
164.2
177_1
74 years, male
153.5
352_1
62 years, male
152.1
353_1
82 years, female
151.6
394_1
75 years, female
151.6
319_1
81 years, male
150.7
315_1
62 years, female
147.5
264_1
73 years, female
145.4
119_1
70 years, female
145.2
18_1
88 years, male
141.8
389_1
86 years, female
141.3
139_1
64 years, female
139.4
375_1
74 years, female
139.2
42_1
85 years, male
138.9
162_1
79 years, female
136.2
348_1
84 years, male
135.9
6_1
73 years, female
135.7
503_1
68 years, male
133.6
149_1
88 years, male
132.8
41_1
94 years, female
130.3
115_1
83 years, male
129.0
377_1
82 years, female
127.0
376_1
75 years, female
123.8
35_1
74 years, female
123.3
142_1
61 years, female
121.0
396_1
62 years, male
119.8
292_1
71 years, male
118.8
243_1
75 years, male
115.4
189_1
76 years, male
112.3
501_1
88 years, male
110.9
517_1
88 years, male
108.8
322_1
76 years, male
106.9
406_1
79 years, male
105.0
355_1
70 years, female
101.5
117_1
61 years, male
101.1
266_1
85 years, male
99.6
237_1
82 years, male
97.2
254_1
77 years, female
96.5
9_1
66 years, female
95.6
265_1
87 years, male
95.4
308_1
70 years, female
94.6
404_1
82 years, female
94.5
246_1
77 years, male
94.2
43_1
64 years, female
91.0
126_1
63 years, male
90.9
468_1
89 years, male
89.8
172_1
72 years, female
89.3
153_1
70 years, female
88.7
324_1
76 years, male
88.5
480_1
63 years, male
88.4
286_1
68 years, female
85.8
99_1
64 years, male
83.1
81_1
67 years, male
83.0
32_1
67 years, male
82.9
288_1
66 years, female
82.5
320_1
89 years, female
82.0
89_1
63 years, male
80.8
313_1
79 years, female
77.9
217_1
76 years, male
77.7
415_1
77 years, female
74.8
499_1
55 years, female
74.8
311_1
78 years, male
74.5
491_1
89 years, female
74.1
425_1
59 years, female
73.5
251_1
78 years, male
73.1
466_1
57 years, female
67.5
307_1
66 years, female
66.7
490_1
67 years, female
65.8
405_1
91 years, male
65.2
293_1
68 years, female
63.4
229_1
69 years, female
61.6
414_1
84 years, female
61.2
413_1
59 years, female
60.7
2_1
77 years, female
60.5
526_1
61 years, male
46.6
495_1
57 years, female
41.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
