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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:8.6 nTPM
HPA Brain:10.0 nTPM
GTEx:8.6 nTPM
FANTOM5:50.4 Scaled Tags Per Million
Pig:22.5 nTPM
Mouse:35.3 nTPM
Allen mouse:0.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA025927
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 9.2
2481 Female, age 94, left hemisphere 11.0
1857 Female, age 85, left hemisphere 10.1
1854 Male, age 80, left hemisphere 9.8
2288 Male, age 75, left hemisphere 9.7
2290 Female, age 72, unknown 9.0
2846 Female, age 79, unknown 8.7
2289 Male, age 61, right hemisphere 8.0
1781 Male, age 74, unknown 7.1
Globus pallidus, externus
nTPM: 9.3
1996 Male, age 80, right hemisphere 11.3
2772 Female, age 79, unknown 10.1
2395 Male, age 75, both hemispheres 9.9
2646 Male, age 61, right hemisphere 7.9
2567 Female, age 72, unknown 7.3
Globus pallidus, internus
nTPM: 10.0
1818 Male, age 74, unknown 11.0
2037 Male, age 80, right hemisphere 10.5
2287 Male, age 75, right hemisphere 10.3
2778 Female, age 91, both hemispheres 10.1
2483 Female, age 94, right hemisphere 9.9
2111 Female, age 85, right hemisphere 9.7
2566 Female, age 72, unknown 8.5
Nucleus accumbens
nTPM: 9.5
2391 Female, age 94, left hemisphere 10.4
1806 Female, age 85, left hemisphere 10.2
2286 Male, age 75, left hemisphere 10.1
2698 Female, age 72, unknown 9.8
1856 Female, age 91, right hemisphere 9.4
2824 Male, age 61, right hemisphere 9.3
2732 Male, age 80, right hemisphere 8.5
1783 Male, age 74, unknown 8.3
Nucleus basalis of Meynert
nTPM: 9.8
2821 Male, age 75, both hemispheres 12.1
2393 Male, age 80, right hemisphere 9.7
2484 Female, age 94, left hemisphere 9.1
2569 Male, age 61, both hemispheres 8.2
Nucleus of the diagonal band
nTPM: 8.3
1812 Female, age 91, both hemispheres 9.2
2195 Female, age 85, both hemispheres 8.6
2029 Male, age 61, right hemisphere 8.0
1979 Male, age 74, unknown 7.9
2775 Male, age 80, right hemisphere 7.7
Putamen
nTPM: 8.6
2482 Female, age 94, left hemisphere 10.9
1838 Male, age 80, right hemisphere 9.2
1829 Male, age 74, unknown 8.9
1937 Female, age 91, right hemisphere 8.7
2489 Female, age 72, unknown 7.9
2466 Female, age 79, unknown 7.4
2647 Male, age 75, left hemisphere 7.3
Septal nuclei
nTPM: 8.5
2199 Male, age 80, right hemisphere 9.2
2629 Female, age 94, right hemisphere 8.8
2031 Female, age 72, unknown 8.7
2009 Female, age 91, both hemispheres 8.6
1960 Male, age 74, unknown 8.4
2059 Female, age 85, both hemispheres 8.0
2394 Male, age 61, left hemisphere 8.0
Stria terminalis, bed nucleus
nTPM: 7.5
1974 Female, age 91, both hemispheres 8.0
2486 Female, age 94, both hemispheres 7.5
2201 Male, age 74, unknown 7.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 8.1
Samples: 246

Max nTPM: 14.9
Min nTPM: 4.5
Std nTPM: 1.7
Median nTPM: 8.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 14.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 12.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 12.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 12.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 11.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 11.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 11.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 11.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 11.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 11.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 11.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 11.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 11.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 11.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 11.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 11.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 10.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 10.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 10.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 10.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 10.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 10.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 10.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 10.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 10.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 10.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 10.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 10.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 10.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 10.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 10.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 10.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 10.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 10.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 10.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 10.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 10.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 10.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 9.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 9.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 9.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 9.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 9.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 9.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 9.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 9.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 9.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 9.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 9.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 9.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 9.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 9.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 9.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 9.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 9.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 9.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 9.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 9.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 9.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 9.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 9.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 9.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 9.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 9.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 9.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 9.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 9.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 9.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 9.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 8.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 8.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 8.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 8.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 8.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 8.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 8.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 8.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 8.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 8.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 8.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 8.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 8.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 8.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 8.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 8.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 8.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 8.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 8.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 8.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 8.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 8.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 8.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 8.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 8.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 8.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 8.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 8.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 8.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 8.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 8.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 8.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 8.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 8.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 8.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 8.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 8.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 8.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 8.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 8.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 8.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 8.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 8.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 8.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 8.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 8.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 8.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 8.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 8.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 8.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 8.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 8.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 8.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 8.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 8.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 8.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 7.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 7.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 7.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 7.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 7.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 7.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 7.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 7.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 7.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 7.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 7.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 7.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 7.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 7.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 7.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 7.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 7.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 7.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 7.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 7.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 7.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 7.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 7.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 7.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 7.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 7.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 7.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 7.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 7.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 7.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 7.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 7.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 7.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 7.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 7.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 7.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 7.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 7.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 7.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 7.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 7.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 7.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 7.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 6.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 6.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 6.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 6.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 6.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 6.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 6.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 6.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 6.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 6.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 6.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 6.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 6.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 6.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 6.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 6.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 6.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 6.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 6.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 6.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 6.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 6.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 6.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 6.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 6.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 6.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 6.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 6.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 6.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 6.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 6.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 6.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 6.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 6.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 6.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 6.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 6.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 6.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 6.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 6.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 6.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 6.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 6.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 6.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 6.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 6.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 6.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 6.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 6.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 6.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 6.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 6.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 6.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 6.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 5.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 5.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 5.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 5.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 5.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 5.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 5.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 5.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 5.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 5.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 5.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 5.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 5.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 5.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 5.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 5.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 5.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 5.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 5.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 5.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 4.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 4.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 7.8
Samples: 246

Max nTPM: 14.4
Min nTPM: 5.0
Std nTPM: 1.8
Median nTPM: 7.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 14.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 14.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 13.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 13.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 12.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 12.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 12.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 12.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 12.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 11.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 11.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 11.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 11.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 11.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 11.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 11.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 11.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 10.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 10.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 10.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 10.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 10.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 10.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 10.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 10.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 10.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 10.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 10.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 10.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 10.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 10.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 10.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 10.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 10.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 9.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 9.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 9.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 9.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 9.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 9.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 9.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 9.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 9.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 9.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 9.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 9.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 9.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 9.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 9.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 9.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 9.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 9.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 9.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 9.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 9.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 8.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 8.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 8.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 8.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 8.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 8.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 8.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 8.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 8.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 8.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 8.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 8.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 8.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 8.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 8.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 8.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 8.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 8.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 8.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 8.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 8.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 8.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 8.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 8.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 8.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 8.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 8.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 7.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 7.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 7.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 7.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 7.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 7.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 7.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 7.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 7.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 7.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 7.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 7.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 7.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 7.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 7.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 7.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 7.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 7.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 7.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 7.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 7.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 7.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 7.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 7.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 7.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 7.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 7.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 7.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 7.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 7.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 7.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 7.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 7.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 7.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 7.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 7.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 7.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 7.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 7.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 7.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 7.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 7.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 7.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 7.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 7.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 7.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 7.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 7.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 7.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 7.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 7.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 7.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 7.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 7.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 7.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 7.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 7.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 7.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 7.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 7.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 7.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 7.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 7.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 7.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 7.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 7.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 7.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 7.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 6.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 6.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 6.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 6.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 6.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 6.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 6.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 6.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 6.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 6.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 6.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 6.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 6.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 6.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 6.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 6.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 6.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 6.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 6.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 6.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 6.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 6.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 6.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 6.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 6.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 6.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 6.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 6.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 6.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 6.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 6.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 6.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 6.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 6.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 6.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 6.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 6.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 6.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 6.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 6.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 6.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 6.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 6.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 6.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 6.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 6.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 6.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 6.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 6.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 6.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 6.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 6.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 6.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 6.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 6.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 6.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 6.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 6.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 6.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 6.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 6.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 6.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 6.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 6.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 6.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 6.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 6.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 6.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 6.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 6.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 6.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 6.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 6.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 6.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 5.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 5.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 5.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 5.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 5.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 5.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 5.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 5.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 5.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 5.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 5.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 5.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 5.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 5.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 5.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 5.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 5.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 5.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 5.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 5.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 5.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 5.0
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Brain - Putamen (basal ganglia)
Average nTPM: 8.6
Samples: 205

Max nTPM: 17.4
Min nTPM: 4.8
Std nTPM: 2.0
Median nTPM: 8.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 17.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 15.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 15.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 13.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 13.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 13.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 13.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 12.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 12.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 12.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 11.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 11.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 11.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 11.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 11.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 11.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 11.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 11.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 11.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 11.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 11.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 11.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 10.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 10.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 10.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 10.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 10.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 10.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 10.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 10.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 10.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 10.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 10.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 10.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 10.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 10.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 10.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 10.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 10.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 10.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 10.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 10.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 10.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 10.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 10.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 10.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 10.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 10.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 9.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 9.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 9.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 9.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 9.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 9.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 9.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 9.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 9.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 9.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 9.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 9.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 9.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 9.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 9.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 9.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 9.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 9.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 9.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 9.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 9.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 9.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 9.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 9.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 9.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 9.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 9.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 9.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 9.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 9.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 9.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 9.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 9.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 9.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 8.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 8.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 8.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 8.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 8.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 8.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 8.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 8.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 8.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 8.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 8.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 8.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 8.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 8.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 8.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 8.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 8.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 8.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 8.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 8.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 8.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 8.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 8.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 8.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 8.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 8.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 8.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 8.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 8.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 8.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 8.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 8.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 8.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 8.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 8.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 8.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 7.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 7.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 7.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 7.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 7.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 7.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 7.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 7.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 7.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 7.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 7.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 7.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 7.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 7.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 7.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 7.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 7.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 7.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 7.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 7.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 7.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 7.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 7.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 7.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 7.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 7.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 7.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 7.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 7.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 7.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 7.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 7.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 7.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 7.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 7.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 7.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 7.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 7.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 6.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 6.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 6.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 6.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 6.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 6.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 6.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 6.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 6.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 6.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 6.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 6.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 6.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 6.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 6.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 6.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 6.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 6.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 6.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 6.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 6.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 6.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 6.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 6.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 6.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 6.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 6.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 6.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 6.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 6.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 6.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 6.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 6.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 6.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 5.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 5.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 5.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 5.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 5.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 5.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 5.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 5.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 5.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 5.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 5.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 5.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 5.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 4.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

50.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 50.4
FF:10164-103B2 76 years, female 50.4
Nucleus accumbens
Scaled Tags Per Million: 43.8
FF:10037-101F1 23-56 years, mixed 43.8
Putamen
Scaled Tags Per Million: 41.2
FF:10176-103C5 60 years, female 41.2
Globus pallidus
Scaled Tags Per Million: 43.3
FF:10161-103A8 76 years, female 53.8
FF:10175-103C4 60 years, female 32.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.5
Pig sample Sample description nTPM
Caudate
nTPM: 16.1
Samples: 4

Max nTPM: 18.5
Min nTPM: 14.0
Sample A Female 18.5
Sample B Female 14.0
Sample C Male 16.6
Sample D Male 15.3
Putamen
nTPM: 20.9
Samples: 4

Max nTPM: 31.1
Min nTPM: 15.4
Sample A Female 31.1
Sample B Female 15.4
Sample C Male 16.5
Sample D Male 20.4
Septum
nTPM: 22.5
Samples: 4

Max nTPM: 29.0
Min nTPM: 15.2
Sample A Female 20.9
Sample B Female 15.2
Sample C Male 29.0
Sample D Male 25.0
Ventral pallidum
nTPM: 21.0
Samples: 4

Max nTPM: 25.2
Min nTPM: 16.2
Sample A Female 16.2
Sample B Female 17.7
Sample C Male 25.2
Sample D Male 25.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 35.3
Samples: 4

Max nTPM: 41.8
Min nTPM: 31.1
Sample A Male 31.2
Sample B Male 31.1
Sample C Female 37.1
Sample D Female 41.8
Septum
nTPM: 33.5
Samples: 4

Max nTPM: 37.1
Min nTPM: 29.0
Sample A Male 29.0
Sample B Male 33.5
Sample C Female 34.3
Sample D Female 37.1
Ventral forebrain
nTPM: 31.7
Samples: 4

Max nTPM: 36.4
Min nTPM: 28.5
Sample A Male 28.5
Sample B Male 30.1
Sample C Female 36.4
Sample D Female 31.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.2
632495 Antisense, RP_040907_01_E03, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.4
632495 Antisense, RP_040907_01_E03, Mouse strain C57BL/6J (56 days, male) 0.4

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