HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:53.4 nTPM
HPA Brain:48.9 nTPM
GTEx:53.4 nTPM
FANTOM5:26.9 Scaled Tags Per Million
Pig:13.7 nTPM
Mouse:8.3 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020733
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 48.9
Sample id Sample description nTPM
Hippocampus
nTPM: 42.3
1898 Male, age 80, left hemisphere 51.9
2621 Female, age 67, right hemisphere 45.0
2148 Female, age 91, left hemisphere 42.9
1911 Female, age 85, right hemisphere 39.5
2529 Female, age 94, left hemisphere 37.8
1855 Male, age 76, left hemisphere 36.6
Dentate gyrus
nTPM: 42.1
1927 Female, age 91, both hemispheres 55.8
2530 Female, age 94, left hemisphere 46.6
2010 Male, age 76, both hemispheres 43.4
2246 Female, age 85, both hemispheres 35.6
2531 Female, age 67, both hemispheres 35.6
2528 Male, age 74, both hemispheres 35.3
Entorhinal gyrus
nTPM: 41.6
2764 Male, age 80, right hemisphere 50.5
2613 Female, age 94, left hemisphere 49.6
1938 Female, age 85, left hemisphere 41.7
1787 Male, age 76, left hemisphere 41.5
2686 Male, age 75, right hemisphere 35.5
2117 Female, age 91, right hemisphere 30.8
Hippocampus, CA1
nTPM: 48.9
2749 Male, age 80, left hemisphere 79.9
2527 Male, age 74, both hemispheres 48.0
1873 Female, age 85, both hemispheres 43.4
2045 Male, age 76, both hemispheres 38.3
2082 Female, age 91, right hemisphere 34.7
Hippocampus, CA2
nTPM: 44.5
1963 Male, age 80, left hemisphere 66.2
1892 Male, age 76, both hemispheres 54.7
2437 Female, age 94, left hemisphere 41.1
2249 Male, age 74, both hemispheres 40.1
2113 Female, age 91, right hemisphere 33.7
1940 Female, age 85, left hemisphere 31.2
Hippocampus, CA3
nTPM: 43.7
2137 Male, age 80, left hemisphere 59.2
1867 Male, age 76, both hemispheres 45.9
2861 Female, age 67, both hemispheres 45.1
2436 Male, age 74, both hemispheres 42.9
2620 Female, age 94, left hemisphere 36.9
1891 Female, age 85, both hemispheres 32.4
Parahippocampal cortex
nTPM: 37.1
2245 Female, age 91, both hemispheres 44.8
1850 Male, age 80, both hemispheres 42.3
2693 Female, age 94, both hemispheres 40.4
1990 Female, age 91, right hemisphere 40.0
2250 Female, age 67, right hemisphere 38.0
1933 Female, age 85, both hemispheres 36.7
2018 Male, age 76, both hemispheres 34.4
2532 Female, age 72, left hemisphere 33.1
2622 Female, age 67, right hemisphere 31.6
2692 Male, age 74, both hemispheres 30.1
Perirhinal gyrus
nTPM: 44.2
1794 Male, age 80, right hemisphere 51.9
1847 Female, age 91, left hemisphere 46.9
2521 Female, age 94, right hemisphere 44.9
1841 Female, age 85, right hemisphere 40.7
2848 Male, age 76, right hemisphere 36.7
Subiculum
nTPM: 37.2
1901 Male, age 80, both hemispheres 44.8
1977 Female, age 85, both hemispheres 39.9
2619 Male, age 74, both hemispheres 35.7
2042 Male, age 76, both hemispheres 34.9
2438 Female, age 94, left hemisphere 34.7
2729 Female, age 91, right hemisphere 33.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 53.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.4
Samples: 197

Max nTPM: 142.8
Min nTPM: 12.0
Std nTPM: 21.4
Median nTPM: 52.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 142.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 111.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 109.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 101.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 98.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 95.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 92.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 92.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 91.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 89.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 89.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.9
FF:10169-103B7 60 years, female 29.0
FF:10153-102I9 76 years, female 24.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.7
Pig sample Sample description nTPM
Subiculum
nTPM: 10.9
Samples: 4

Max nTPM: 12.7
Min nTPM: 10.1
Sample A Female 10.1
Sample B Female 10.6
Sample C Male 12.7
Sample D Male 10.3
Dorsal hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 11.7
Min nTPM: 8.9
Sample A Female 8.9
Sample B Female 10.0
Sample C Male 11.7
Sample D Male 10.1
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 15.5
Min nTPM: 11.4
Sample A Female 11.4
Sample B Female 12.9
Sample C Male 15.5
Sample D Male 15.2
Ventral hippocampus
nTPM: 10.4
Samples: 4

Max nTPM: 12.0
Min nTPM: 9.2
Sample A Female 9.4
Sample B Female 9.2
Sample C Male 12.0
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 8.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.4
Samples: 4

Max nTPM: 9.1
Min nTPM: 7.6
Sample A Male 7.6
Sample B Male 9.1
Sample C Female 8.1
Sample D Female 8.6
Hippocampal formation
nTPM: 7.7
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.9
Sample A Male 8.5
Sample B Male 6.9
Sample C Female 7.3
Sample D Female 8.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
67978412 Antisense, RP_040923_01_B04, Mouse strain C57BL/6J (56 days, male) 1.7

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