HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:27.1 nTPM
HPA Brain:31.6 nTPM
GTEx:27.1 nTPM
FANTOM5:36.8 Scaled Tags Per Million
Mouse:14.3 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA067063
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 31.6
Sample id Sample description nTPM
Hippocampus
nTPM: 28.9
1911 Female, age 85, right hemisphere 31.6
2621 Female, age 67, right hemisphere 31.3
2529 Female, age 94, left hemisphere 29.4
2148 Female, age 91, left hemisphere 29.2
1855 Male, age 76, left hemisphere 26.0
1898 Male, age 80, left hemisphere 26.0
Dentate gyrus
nTPM: 27.9
2246 Female, age 85, both hemispheres 31.4
2531 Female, age 67, both hemispheres 29.4
2530 Female, age 94, left hemisphere 28.7
1927 Female, age 91, both hemispheres 26.5
2010 Male, age 76, both hemispheres 26.3
2528 Male, age 74, both hemispheres 25.2
Entorhinal gyrus
nTPM: 31.0
2613 Female, age 94, left hemisphere 32.8
2764 Male, age 80, right hemisphere 32.8
2686 Male, age 75, right hemisphere 31.3
1787 Male, age 76, left hemisphere 30.4
1938 Female, age 85, left hemisphere 29.8
2117 Female, age 91, right hemisphere 28.9
Hippocampus, CA1
nTPM: 26.0
2082 Female, age 91, right hemisphere 27.5
1873 Female, age 85, both hemispheres 27.3
2527 Male, age 74, both hemispheres 26.0
2045 Male, age 76, both hemispheres 25.1
2749 Male, age 80, left hemisphere 24.1
Hippocampus, CA2
nTPM: 28.1
1940 Female, age 85, left hemisphere 33.0
2437 Female, age 94, left hemisphere 31.9
2249 Male, age 74, both hemispheres 27.0
1892 Male, age 76, both hemispheres 26.2
1963 Male, age 80, left hemisphere 25.7
2113 Female, age 91, right hemisphere 24.9
Hippocampus, CA3
nTPM: 29.7
2620 Female, age 94, left hemisphere 37.6
1891 Female, age 85, both hemispheres 35.1
2861 Female, age 67, both hemispheres 28.1
1867 Male, age 76, both hemispheres 27.3
2436 Male, age 74, both hemispheres 25.3
2137 Male, age 80, left hemisphere 24.5
Parahippocampal cortex
nTPM: 28.5
2692 Male, age 74, both hemispheres 33.0
2532 Female, age 72, left hemisphere 29.1
2693 Female, age 94, both hemispheres 28.9
2622 Female, age 67, right hemisphere 28.6
1990 Female, age 91, right hemisphere 28.4
1850 Male, age 80, both hemispheres 28.1
2018 Male, age 76, both hemispheres 28.1
1933 Female, age 85, both hemispheres 28.0
2245 Female, age 91, both hemispheres 27.9
2250 Female, age 67, right hemisphere 25.1
Perirhinal gyrus
nTPM: 26.3
1847 Female, age 91, left hemisphere 26.7
2521 Female, age 94, right hemisphere 26.6
1841 Female, age 85, right hemisphere 26.5
2848 Male, age 76, right hemisphere 26.5
1794 Male, age 80, right hemisphere 25.5
Subiculum
nTPM: 31.6
2042 Male, age 76, both hemispheres 36.0
2438 Female, age 94, left hemisphere 35.2
1901 Male, age 80, both hemispheres 33.0
2619 Male, age 74, both hemispheres 29.6
1977 Female, age 85, both hemispheres 28.1
2729 Female, age 91, right hemisphere 27.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 27.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.1
Samples: 197

Max nTPM: 52.5
Min nTPM: 16.8
Std nTPM: 5.8
Median nTPM: 26.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 52.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 48.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 45.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 43.5
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 42.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 41.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 40.9
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 40.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 39.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 39.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 39.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 36.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.8
FF:10153-102I9 76 years, female 41.4
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 14.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 13.8
Min nTPM: 12.3
Sample A Male 12.3
Sample B Male 12.7
Sample C Female 13.8
Sample D Female 12.6
Hippocampal formation
nTPM: 14.3
Samples: 4

Max nTPM: 15.2
Min nTPM: 13.5
Sample A Male 15.2
Sample B Male 14.2
Sample C Female 14.4
Sample D Female 13.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
67767471 Antisense, RP_040916_02_B11, Mouse strain C57BL/6J (56 days, male) 1.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org