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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SIGMAR1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
71.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
68.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
56.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
49.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
46.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
46.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
44.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
44.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
43.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
42.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
40.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
32.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
31.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
30.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
29.9
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
29.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
29.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
28.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
27.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
27.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
25.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
24.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
24.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
24.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
23.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
22.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
22.3
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
22.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
21.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
21.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
21.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
20.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
20.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
19.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
19.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
17.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
17.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
16.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
16.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
16.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
15.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
15.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
15.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
14.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
13.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
13.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
12.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
12.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
11.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
9.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
9.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
1.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.1
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SIGMAR1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
130.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
101.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
83.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
75.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
66.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
56.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
48.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
47.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
46.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
46.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
45.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
44.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
44.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
44.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
44.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
43.7
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
43.4
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
42.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
42.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
42.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
41.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
41.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
41.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
41.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
41.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
40.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
40.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
40.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
40.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
39.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
39.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
39.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
39.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
39.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
38.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
38.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
38.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
38.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
38.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
38.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
37.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
37.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
37.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
37.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
37.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
37.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
37.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
37.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
37.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
37.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
37.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
37.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
37.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
37.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
37.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
37.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
36.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
36.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
36.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
36.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
36.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
36.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
36.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
36.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
36.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
36.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
35.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
35.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
35.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
35.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
35.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
35.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
34.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
34.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
34.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
34.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
34.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
34.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
34.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
34.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
34.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
34.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
34.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
34.3
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
34.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
34.1
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
34.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
34.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
34.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
33.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
33.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
33.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
33.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
33.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
33.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
33.2
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
33.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
33.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
33.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
32.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
32.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
32.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
32.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
32.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
32.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
32.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
32.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
32.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
32.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
32.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
32.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
32.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
32.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
32.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
32.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
32.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
32.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
32.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
32.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
32.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
32.0
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
32.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
32.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
32.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
31.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
31.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
31.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
31.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
31.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
31.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
31.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
31.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
31.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
31.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
31.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
31.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
31.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
31.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
31.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
31.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
31.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
31.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
31.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
30.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
30.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
30.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
30.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
30.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
30.7
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
30.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
30.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
30.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
30.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
30.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
30.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
30.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
30.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
30.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
30.3
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
30.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
30.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
30.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
30.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
30.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
30.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
30.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
30.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
29.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
29.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
29.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
29.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
29.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
29.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
29.6
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
29.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
29.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
29.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
29.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
29.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
29.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
29.1
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
29.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
29.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
29.0
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
28.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
28.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
28.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
28.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
28.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
28.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
28.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
28.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
28.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
28.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
28.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
28.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
28.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
28.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
28.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
28.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
28.0
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
27.9
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
27.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
27.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
27.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
27.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
27.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
27.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
27.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
27.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
27.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
27.2
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
27.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
27.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
27.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
27.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
26.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
26.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
26.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
26.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
26.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
26.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
26.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
26.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
26.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
26.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
26.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
26.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
26.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
26.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
26.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
26.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
26.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
26.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
26.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
26.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
26.1
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
26.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
26.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
26.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
25.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
25.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
25.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
25.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
25.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
25.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
25.7
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
25.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
25.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
25.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
25.5
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
25.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
25.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
25.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
25.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
25.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
25.4
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
25.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
25.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
25.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
25.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
25.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
25.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
25.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
25.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
25.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
25.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
24.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
24.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
24.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
24.8
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
24.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
24.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
24.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
24.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
24.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
24.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
24.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
24.3
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
24.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
24.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
24.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
24.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
24.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
24.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
24.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
23.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
23.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
23.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
23.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
23.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
23.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
23.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
23.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
23.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
23.5
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
23.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
23.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
23.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
23.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
23.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
22.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
22.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
22.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
22.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
22.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
22.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
22.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
22.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
22.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
22.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
22.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
22.5
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
22.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
22.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
22.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
22.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.3
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
22.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
22.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
22.1
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
22.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
22.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
22.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
22.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
22.0
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
21.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
21.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
21.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
21.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
21.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
21.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
21.7
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
21.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
21.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
21.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
21.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
21.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
21.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
21.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
21.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
21.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
21.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
21.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
21.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
21.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
21.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
21.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
21.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
21.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
20.9
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
20.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
20.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
20.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
20.7
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
20.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
20.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
20.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
20.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
20.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
20.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
20.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
20.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
20.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
20.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
20.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
20.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
20.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
20.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
20.1
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
20.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
20.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
19.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
19.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
19.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
19.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
19.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
19.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
19.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
19.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
19.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
19.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
19.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
18.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
18.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
18.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
18.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
18.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
18.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
18.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
18.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.5
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
18.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
18.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
18.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
18.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
18.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
18.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
18.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
17.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
17.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
17.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
17.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
17.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
17.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
17.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
17.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
17.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
17.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
17.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
17.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
17.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
17.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
17.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
16.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
16.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.8
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
16.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
16.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
16.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
16.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
16.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
16.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
15.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
15.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
15.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
15.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
15.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
15.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
14.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
14.8
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
14.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
14.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
14.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
14.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
14.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
14.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
13.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
13.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
13.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
13.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
13.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
12.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.4
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
11.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
9.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
9.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
8.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
8.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
6.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
6.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SIGMAR1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
29.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
190.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
68.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
58.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
49.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
42.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
40.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
40.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
39.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
38.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
37.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
37.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
36.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
36.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
36.0
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
36.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
35.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
34.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
34.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
34.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
34.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
33.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
33.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
33.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
33.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
33.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
32.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
32.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
32.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
32.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
32.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
31.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
31.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
31.2
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
31.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
30.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
30.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
30.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
30.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
29.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
29.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
29.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
29.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
28.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
28.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
28.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
27.8
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
27.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
27.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
27.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
27.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
26.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
26.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
26.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
26.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
26.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
25.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
25.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
25.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
25.0
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
24.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
24.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
24.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
24.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
24.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
24.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
24.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
23.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
23.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
23.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
23.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.7
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
22.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
22.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
21.7
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
20.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
20.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
19.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
18.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
17.1
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
16.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
14.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
13.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
12.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SIGMAR1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
34.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
138.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
131.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
108.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
107.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
106.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
105.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
104.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
90.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
85.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
85.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
76.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
74.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
72.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
72.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
71.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
71.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
70.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
70.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
70.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
70.2
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
70.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
69.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
68.9
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
67.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
66.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
65.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
65.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
64.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
63.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
62.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
62.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
61.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
60.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
60.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
58.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
58.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
58.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
56.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
56.7
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
56.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
55.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
53.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
53.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
52.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
52.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
52.3
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
51.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
51.5
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
51.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
50.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
49.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
49.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
49.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
48.3
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
47.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
47.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
47.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
47.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
46.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
46.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
45.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
45.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
45.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
45.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
44.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
44.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
44.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
44.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
44.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
43.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
43.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
43.5
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
43.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
43.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
43.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
42.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
42.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
42.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
42.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
42.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
42.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
42.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
42.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
41.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
41.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
41.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
41.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
41.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
40.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
40.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
40.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
39.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
39.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
39.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
39.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
39.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
39.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
39.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
38.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
38.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
37.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
37.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
37.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
37.3
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
37.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
36.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
36.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
36.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
35.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
35.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
35.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
35.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
34.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
34.7
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
34.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
34.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
34.4
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
34.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
34.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
34.2
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
34.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
33.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
33.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
33.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
33.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
32.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
32.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
32.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
32.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
32.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
31.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
31.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
31.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
31.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
31.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
31.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
31.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
31.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
30.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
30.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
30.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
30.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
30.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
30.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
30.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
30.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
30.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
30.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
30.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
30.0
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
29.9
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
29.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
29.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
29.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
29.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
29.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
28.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
28.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
28.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
28.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
28.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
28.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
28.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
27.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
27.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
27.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
27.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
27.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
27.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
27.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
26.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
26.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
26.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
26.3
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
26.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
26.1
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
25.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
25.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
25.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
25.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
25.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
25.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
25.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
25.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
25.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
25.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
24.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
24.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
24.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
24.1
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
24.0
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
24.0
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
23.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
23.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
23.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
23.7
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
23.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
23.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
23.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
23.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
23.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
23.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
22.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
22.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
22.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
22.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
22.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
22.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
22.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
21.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
21.5
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
21.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
21.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
21.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
21.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
19.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
19.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
19.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
19.4
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
19.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
19.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
19.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
18.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
18.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
18.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
17.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
17.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
17.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
17.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
17.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
16.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
16.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
13.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
13.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
13.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
10.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
9.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
8.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
8.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
2.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
1.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002350011
Tumor
2.2
CPT0079270003
Tumor
1.4
CPT0001340003
Tumor
1.1
CPT0025110003
Tumor
1.1
CPT0012180003
Tumor
0.6
CPT0065750003
Tumor
0.6
CPT0092290003
Tumor
0.6
CPT0078830003
Tumor
0.6
CPT0015730003
Tumor
0.5
CPT0088690003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0086030003
Tumor
0.5
CPT0088630003
Tumor
0.5
CPT0078840001
Normal
0.5
CPT0078930003
Tumor
0.5
CPT0000640003
Tumor
0.4
CPT0025290003
Tumor
0.4
CPT0025170003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0001260009
Tumor
0.4
CPT0014160003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0010120001
Normal
0.3
CPT0088900003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0023690003
Tumor
0.3
CPT0078670001
Normal
0.3
CPT0078660003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0006900003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0084560003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0088780001
Normal
0.2
CPT0086360003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0006950001
Normal
0.1
CPT0020120003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0010160003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0077140001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0092310003
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0025880003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0023710001
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0088710001
Normal
0.0
CPT0069010001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0020130001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0007870001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0069160003
Tumor
0.0
CPT0079000001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0077500001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0078940001
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0065930003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0078800003
Tumor
-0.2
CPT0092730003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0075170001
Normal
-0.2
CPT0079380003
Tumor
-0.2
CPT0007320003
Tumor
-0.2
CPT0014370004
Tumor
-0.2
CPT0079300001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0007470001
Normal
-0.2
CPT0081600003
Tumor
-0.3
CPT0019160001
Normal
-0.3
CPT0092160003
Tumor
-0.3
CPT0086370003
Normal
-0.3
CPT0014470001
Normal
-0.3
CPT0012290003
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0001500009
Tumor
-0.3
CPT0064400001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0069190001
Normal
-0.5
CPT0064370003
Tumor
-0.5
CPT0012080003
Tumor
-0.6
CPT0025920001
Normal
-0.6
CPT0075570001
Normal
-0.6
CPT0006730001
Normal
-0.6
CPT0092740003
Normal
-0.6
CPT0012090003
Normal
-0.7
CPT0076350001
Normal
-0.7
CPT0007860003
Tumor
-0.7
CPT0012670003
Tumor
-0.8
CPT0017850003
Tumor
-1.3
CPT0012640003
Normal
-1.5
CPT0018250001
Normal
-1.7
CPT0026410003
Tumor
N/A
CPT0000790001
Normal
N/A
CPT0001180009
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0086890003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0082010001
Normal
N/A
CPT0079180003
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0001190001
Normal
N/A
CPT0012770003
Normal
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0063320003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0086870003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0081990003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
