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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFB9 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
545.9
Number of samples
349
Samples
Sample
Description
TPM
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
2773.1
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
2626.9
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
2566.5
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1941.3
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
1725.1
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
1715.6
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
1613.2
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
1593.5
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1535.0
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
1525.1
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
1369.5
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1328.2
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
1281.6
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
1262.1
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
1228.1
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
1176.8
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
1171.5
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
1152.8
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
1148.4
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1120.3
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1117.4
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
1065.5
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
1051.5
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
1036.9
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
1027.6
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
997.5
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
988.3
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
967.6
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
960.2
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
957.5
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
952.3
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
949.6
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
946.8
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
936.7
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
932.3
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
926.0
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
924.7
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
924.5
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
919.1
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
915.0
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
908.6
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
906.7
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
897.8
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
892.8
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
889.1
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
875.9
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
865.8
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
856.3
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
852.4
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
849.6
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
805.8
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
796.7
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
793.1
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
791.6
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
789.0
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
787.8
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
786.8
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
785.3
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
776.3
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
776.1
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
773.9
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
764.7
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
760.5
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
760.1
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
756.2
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
750.8
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
743.6
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
738.1
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
736.2
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
735.9
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
734.5
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
729.5
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
723.7
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
722.1
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
721.5
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
719.9
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
718.7
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
710.1
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
707.8
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
705.4
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
699.0
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
694.8
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
684.0
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
682.7
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
676.0
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
673.4
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
672.2
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
668.9
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
667.9
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
665.0
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
658.0
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
655.8
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
653.4
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
653.2
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
646.0
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
645.7
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
643.3
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
640.8
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
638.0
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
637.3
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
617.7
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
616.9
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
613.9
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
612.6
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
612.5
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
610.4
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
601.3
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
596.8
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
590.5
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
590.4
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
586.6
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
584.5
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
581.0
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
577.7
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
574.4
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
571.8
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
569.5
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
566.1
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
564.7
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
561.8
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
561.1
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
559.9
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
556.4
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
556.4
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
552.3
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
551.7
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
550.7
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
547.7
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
545.6
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
543.8
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
540.8
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
540.0
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
539.3
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
539.1
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
537.6
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
535.2
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
533.0
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
531.7
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
529.9
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
527.9
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
527.2
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
524.9
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
523.7
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
518.3
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
517.9
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
512.9
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
511.4
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
510.5
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
505.6
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
498.2
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
498.2
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
494.5
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
494.1
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
490.6
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
488.9
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
487.9
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
486.7
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
486.0
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
485.6
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
485.2
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
484.8
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
484.1
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
479.0
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
478.2
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
477.7
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
477.1
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
473.0
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
472.8
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
472.4
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
472.2
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
468.8
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
468.6
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
466.9
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
466.4
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
465.3
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
465.2
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
464.8
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
464.3
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
461.0
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
460.7
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
460.6
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
460.0
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
458.3
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
456.6
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
456.6
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
455.6
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
454.2
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
451.6
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
451.5
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
448.0
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
447.8
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
446.8
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
445.2
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
444.1
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
440.3
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
429.3
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
428.6
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
427.7
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
423.5
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
420.7
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
420.6
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
413.0
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
410.5
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
407.4
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
406.8
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
400.9
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
398.6
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
395.0
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
393.6
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
393.4
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
392.7
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
391.9
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
390.9
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
389.1
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
384.5
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
383.2
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
380.6
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
380.4
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
378.1
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
377.8
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
377.5
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
376.9
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
376.3
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
375.6
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
375.0
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
371.6
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
371.3
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
367.1
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
366.3
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
365.3
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
364.5
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
360.3
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
358.3
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
357.2
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
354.6
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
352.9
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
352.1
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
349.3
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
347.9
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
347.6
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
346.7
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
344.0
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
341.3
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
340.9
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
339.0
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
337.4
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
334.7
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
332.5
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
329.7
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
329.6
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
329.0
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
325.0
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
323.2
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
322.8
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
319.3
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
317.9
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
316.1
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
314.1
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
310.8
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
309.7
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
309.1
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
308.8
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
307.3
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
306.7
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
306.3
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
306.1
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
304.8
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
303.4
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
302.4
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
302.2
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
301.6
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
300.8
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
300.4
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
298.5
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
297.5
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
293.2
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
292.1
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
289.8
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
288.8
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
288.4
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
288.4
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
287.2
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
286.6
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
285.0
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
284.8
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
284.8
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
284.4
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
284.2
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
281.1
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
279.8
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
279.6
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
278.3
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
276.1
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
276.0
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
275.5
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
271.3
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
270.0
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
266.2
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
266.1
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
263.9
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
262.8
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
258.9
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
256.5
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
251.6
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
246.6
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
245.8
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
244.2
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
243.2
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
243.2
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
243.0
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
240.2
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
236.7
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
236.4
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
235.4
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
235.2
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
234.5
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
231.4
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
230.8
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
229.7
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
225.5
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
222.4
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
220.5
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
220.4
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
216.0
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
215.9
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
214.4
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
213.0
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
212.6
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
209.6
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
200.3
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
197.1
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
195.8
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
191.8
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
190.2
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
188.4
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
187.3
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
183.5
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
182.4
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
177.1
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
174.4
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
173.7
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
169.6
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
158.7
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
158.0
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
152.6
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
151.3
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
149.2
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
147.3
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NDUFB9 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
506.4
Number of samples
81
Samples
Sample
Description
TPM
DO46576
0 years, female, NA, stage:III, alive, 133 days
2332.0
DO46350
0 years, female, NA, stage:III, dead, 886 days
1963.0
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
1668.7
DO46518
0 years, female, NA, stage:III, alive, 2960 days
1358.1
DO46333
0 years, female, NA, stage:III, dead, 359 days
1342.8
DO46366
0 years, female, NA, stage:III, dead, 2054 days
1084.5
DO46586
0 years, female, NA, stage:III, dead, 1019 days
1065.5
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1061.8
DO46336
0 years, female, NA, stage:IV, dead, 664 days
974.1
DO46551
0 years, female, NA, stage:III, dead, 1055 days
963.8
DO46493
0 years, female, NA, stage:IV, alive, 839 days
814.5
DO46372
0 years, female, NA, stage:III, dead, 1326 days
769.2
DO46340
0 years, female, NA, stage:III, dead, 616 days
766.5
DO46390
0 years, female, NA, stage:III, dead, 374 days
658.5
DO46378
0 years, female, NA, stage:III, alive, 843 days
623.9
DO46364
0 years, female, NA, stage:III, dead, 806 days
623.4
DO46342
0 years, female, NA, stage:III, dead, 1398 days
622.1
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
591.9
DO46568
0 years, female, NA, stage:III, dead, 320 days
567.0
DO46370
0 years, female, NA, stage:III, dead, 1727 days
558.4
DO46329
0 years, female, NA, stage:III, dead, 1699 days
542.1
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
538.0
DO46388
0 years, female, NA, stage:III, dead, 413 days
534.0
DO46538
0 years, female, NA, stage:III, dead, 1527 days
518.8
DO46392
0 years, female, NA, stage:III, dead, 628 days
504.7
DO46400
0 years, female, NA, stage:III, dead, 719 days
490.3
DO46581
0 years, female, NA, stage:III, dead, 408 days
477.2
DO46443
0 years, female, NA, stage:III, dead, 2464 days
462.6
DO46611
0 years, female, NA, stage:III, dead, 734 days
455.5
DO46566
0 years, female, NA, stage:III, dead, 673 days
454.3
DO46453
0 years, female, NA, stage:III, dead, 3294 days
451.0
DO46546
0 years, female, NA, stage:III, dead, 1889 days
443.8
DO46344
0 years, female, NA, stage:III, dead, 642 days
434.6
DO46376
0 years, female, NA, stage:III, dead, 1430 days
430.3
DO46602
0 years, female, NA, stage:III, dead, 205 days
429.8
DO46528
0 years, female, NA, stage:III, alive, 6139 days
429.2
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
425.4
DO46352
0 years, female, NA, stage:III, dead, 677 days
421.9
DO46591
0 years, female, NA, stage:III, dead, 195 days
413.2
DO46325
0 years, female, NA, stage:III, dead, 477 days
391.1
DO46368
0 years, female, NA, stage:III, dead, 2879 days
388.4
DO46346
0 years, female, NA, stage:III, dead, 1187 days
387.6
DO46331
0 years, female, NA, stage:III, dead, 612 days
384.1
DO46374
0 years, female, NA, stage:III, dead, 1409 days
383.6
DO46571
0 years, female, NA, stage:III, dead, 243 days
383.2
DO46448
0 years, female, NA, stage:III, dead, 654 days
382.3
DO46348
0 years, female, NA, stage:IV, dead, 287 days
376.9
DO46561
0 years, female, NA, stage:III, dead, 195 days
356.2
DO46606
0 years, female, NA, stage:III, alive, 804 days
353.2
DO46386
0 years, female, NA, stage:III, dead, 1162 days
350.3
DO46356
0 years, female, NA, stage:III, dead, 911 days
343.6
DO46508
0 years, female, NA, stage:III, dead, 2101 days
327.2
DO46533
0 years, female, NA, stage:III, alive, 3667 days
313.1
DO46408
0 years, female, NA, stage:III, dead, 489 days
301.4
DO46354
0 years, female, NA, stage:III, dead, 843 days
300.0
DO46463
0 years, female, NA, stage:III, dead, 2451 days
297.6
DO46396
0 years, female, NA, stage:III, dead, 583 days
295.1
DO46334
0 years, female, NA, stage:III, dead, 496 days
286.3
DO46330
0 years, female, NA, stage:III, dead, 684 days
281.3
DO46362
0 years, female, NA, stage:III, dead, 1639 days
274.5
DO46327
0 years, female, NA, stage:III, dead, 184 days
271.2
DO46332
0 years, female, NA, stage:III, dead, 689 days
271.1
DO46404
0 years, female, NA, stage:III, dead, 690 days
264.7
DO46338
0 years, female, NA, stage:III, dead, 596 days
260.1
DO46412
0 years, female, NA, stage:III, dead, 597 days
256.4
DO46432
0 years, female, NA, stage:III, alive, 2218 days
251.6
DO46468
0 years, female, NA, stage:III, alive, 2776 days
247.0
DO46597
0 years, female, NA, stage:III, dead, 393 days
244.9
DO46382
0 years, female, NA, stage:IV, dead, 311 days
243.5
DO46560
0 years, female, NA, stage:IV, dead, 286 days
232.2
DO46358
0 years, female, NA, stage:III, dead, 423 days
231.8
DO46328
0 years, female, NA, stage:III, dead, 972 days
228.9
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
226.3
DO46436
0 years, female, NA, stage:III, alive, 3193 days
223.1
DO46398
0 years, female, NA, stage:III, alive, 437 days
222.9
DO46384
0 years, female, NA, stage:III, dead, 614 days
192.6
DO46588
0 years, female, NA, stage:III, dead, 438 days
185.3
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
162.6
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
142.7
DO46402
0 years, female, NA, stage:III, dead, 511 days
131.2
DO46326
0 years, female, NA, stage:III, dead, 701 days
112.2
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
1.5
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
1.1
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
1.1
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
1.0
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
1.0
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
0.9
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
0.9
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
0.9
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.7
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
0.7
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
0.7
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.7
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
0.7
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
0.7
161317f3-1a39-438e-af45-cd2502_D2
Tumor
0.7
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
0.6
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.6
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
0.6
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.6
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
0.6
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
0.6
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
0.6
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
0.6
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
0.6
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.5
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.5
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
0.5
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
0.5
15524912-685a-47ce-a824-567848_D2
Tumor
0.5
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.5
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
0.5
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
0.5
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
0.5
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
0.5
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
0.5
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
0.5
a3a26070-fb84-406a-8280-d555e6_D2
Normal
0.5
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
0.5
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
0.4
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
0.4
1a10c200-3895-4648-b951-94f99f_D2
Tumor
0.4
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
0.4
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
0.4
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
0.4
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
0.4
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.4
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
0.4
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.3
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
0.3
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
0.3
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
0.3
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
0.3
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.3
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
0.3
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.3
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
0.3
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
0.3
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
0.3
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
0.3
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.3
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
0.2
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.2
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
0.2
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.2
2f901c90-617e-46da-9fac-d68369_D2
Tumor
0.2
10c2d629-0287-4511-ac25-f29031_D2
Tumor
0.2
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
0.2
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.2
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.2
21efd60f-6a31-4b98-9477-16a905_D2
Normal
0.2
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
0.1
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
0.1
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.1
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
0.1
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
0.1
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
0.1
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
0.1
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.1
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
0.1
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.1
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
0.1
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.1
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.0
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.0
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
0.0
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.0
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.0
1db5574d-aca7-403c-8100-6e705f_D2
Normal
0.0
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.0
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.0
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
-0.1
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-0.1
e9d416e7-f661-400a-896e-388545_D2
Tumor
-0.1
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
-0.1
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.1
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
-0.1
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.2
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
-0.2
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-0.2
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
-0.2
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
-0.2
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
-0.2
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.3
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
-0.3
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.4
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.5
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
-0.5
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
-0.6
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.