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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
199.4
nTPM
GTEx:
199.4
nTPM
FANTOM5:
94.7
Scaled Tags Per Million
Pig:
170.1
nTPM
Mouse:
570.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
199.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 199.4
Samples: 105
Max nTPM: 294.7
Min nTPM: 136.1
Std nTPM: 32.6
Median nTPM:
413_1
59 years, female
294.7
415_1
77 years, female
278.2
162_1
79 years, female
263.7
126_1
63 years, male
263.5
466_1
57 years, female
260.5
414_1
84 years, female
257.4
490_1
67 years, female
256.3
149_1
88 years, male
249.2
81_1
67 years, male
242.1
266_1
85 years, male
241.7
2_1
77 years, female
241.1
43_1
64 years, female
239.2
324_1
76 years, male
237.4
246_1
77 years, male
236.7
153_1
70 years, female
235.8
32_1
67 years, male
235.4
35_1
74 years, female
234.4
117_1
61 years, male
228.8
495_1
57 years, female
226.6
468_1
89 years, male
226.0
139_1
64 years, female
225.5
145_1
84 years, male
225.0
491_1
89 years, female
223.9
18_1
88 years, male
222.9
404_1
82 years, female
222.2
307_1
66 years, female
221.9
375_1
74 years, female
221.1
229_1
69 years, female
220.9
526_1
61 years, male
220.6
499_1
55 years, female
219.7
316_1
62 years, male
217.1
518_1
75 years, female
215.0
237_1
82 years, male
213.0
217_1
76 years, male
212.9
17_1
71 years, male
212.8
89_1
63 years, male
211.9
501_1
88 years, male
211.8
115_1
83 years, male
211.6
9_1
66 years, female
211.0
6_1
73 years, female
209.9
347_1
72 years, male
209.5
189_1
76 years, male
208.0
386_1
76 years, male
207.9
321_1
62 years, female
206.5
377_1
82 years, female
206.4
425_1
59 years, female
206.1
172_1
72 years, female
205.7
119_1
70 years, female
205.4
311_1
78 years, male
205.3
142_1
61 years, female
204.8
335_1
73 years, female
203.0
405_1
91 years, male
201.7
313_1
79 years, female
196.8
480_1
63 years, male
195.7
265_1
87 years, male
194.7
243_1
75 years, male
192.5
120_1
70 years, female
191.1
42_1
85 years, male
190.9
99_1
64 years, male
190.9
109_1
81 years, female
190.9
389_1
86 years, female
190.9
315_1
62 years, female
190.2
406_1
79 years, male
189.5
379_1
60 years, male
188.7
318_1
68 years, male
188.6
447_1
81 years, male
188.5
254_1
77 years, female
187.5
251_1
78 years, male
186.5
292_1
71 years, male
185.8
286_1
68 years, female
185.0
319_1
81 years, male
184.4
517_1
88 years, male
183.5
384_1
83 years, male
180.2
293_1
68 years, female
180.1
288_1
66 years, female
179.6
396_1
62 years, male
179.6
137_1
83 years, male
179.3
177_1
74 years, male
179.1
322_1
76 years, male
179.0
348_1
84 years, male
178.6
173_1
67 years, male
173.8
353_1
82 years, female
172.3
376_1
75 years, female
172.3
503_1
68 years, male
171.8
355_1
70 years, female
170.2
291_1
76 years, male
169.9
308_1
70 years, female
167.6
352_1
62 years, male
165.4
350_1
84 years, female
163.3
320_1
89 years, female
162.1
394_1
75 years, female
159.6
4_1
88 years, female
158.0
41_1
94 years, female
157.4
356_1
87 years, female
156.7
506_1
65 years, male
156.6
314_1
67 years, male
154.6
317_1
60 years, male
153.4
163_1
78 years, male
150.4
349_1
83 years, male
150.2
218_1
71 years, female
149.2
264_1
73 years, female
146.9
354_1
81 years, female
145.5
295_1
61 years, female
139.1
452_1
88 years, female
136.9
351_1
91 years, male
136.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.