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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGFBP3 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
77.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
667.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
653.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
648.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
626.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
499.7
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
426.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
360.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
356.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
353.9
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
348.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
345.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
338.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
334.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
295.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
287.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
280.0
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
278.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
264.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
253.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
253.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
252.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
236.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
235.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
234.0
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
231.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
228.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
223.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
223.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
223.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
201.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
197.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
193.6
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
189.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
183.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
180.9
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
169.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
165.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
164.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
162.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
159.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
158.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
156.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
156.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
151.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
149.6
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
146.9
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
142.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
138.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
134.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
133.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
131.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
128.3
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
126.2
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
124.9
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
124.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
121.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
119.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
118.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
118.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
116.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
115.7
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
111.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
109.4
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
108.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
107.8
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
107.7
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
105.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
105.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
104.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
104.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
104.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
103.8
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
103.3
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
102.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
101.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
100.8
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
100.7
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
100.7
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
98.9
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
98.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
96.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
96.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
95.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
94.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
94.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
94.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
93.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
93.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
93.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
92.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
92.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
92.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
90.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
88.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
87.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
86.6
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
86.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
86.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
85.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
84.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
84.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
84.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
82.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
80.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
79.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
79.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
79.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
78.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
78.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
78.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
77.5
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
76.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
75.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
75.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
74.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
73.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
73.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
73.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
72.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
72.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
70.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
70.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
69.5
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
68.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
68.6
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
68.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
68.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
68.1
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
68.0
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
67.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
66.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
66.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
66.6
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
66.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
64.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
64.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
64.3
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
63.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
63.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
63.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
62.6
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
62.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
62.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
62.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
62.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
61.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
61.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
61.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
60.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
60.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
60.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
60.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
59.9
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
59.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
59.1
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
58.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
58.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
58.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
57.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
57.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
56.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
56.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
56.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
56.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
54.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
53.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
53.5
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
52.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
52.2
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
52.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
51.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
51.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
50.1
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
49.2
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
48.8
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
47.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
47.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
47.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
47.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
46.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
46.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
46.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
44.6
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
44.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
43.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
43.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
43.5
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
43.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
43.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
42.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
42.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
42.3
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
42.0
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
41.5
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
41.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
41.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
40.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
40.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
40.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
40.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
40.1
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
39.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
39.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
39.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
39.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
38.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
38.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
38.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
38.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
37.7
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
37.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
37.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
37.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
37.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
36.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
36.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
36.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
36.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
36.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
36.4
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
36.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
35.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
34.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
34.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
34.5
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
34.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
33.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
33.2
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
32.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
32.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
31.6
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
31.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
31.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
31.2
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
30.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
30.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
29.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
29.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
29.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
29.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
28.9
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
28.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
28.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
28.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
28.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
28.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
28.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
28.0
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
26.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
26.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
26.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
26.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
26.2
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
26.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
26.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
26.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
25.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
25.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
25.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
25.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
24.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
24.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
24.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
24.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
24.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
23.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
23.7
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
23.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
23.5
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
22.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
22.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
22.4
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
22.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
22.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
22.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
22.1
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
22.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
21.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
21.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
21.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
21.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
21.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
21.0
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
20.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
20.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
20.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
20.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
20.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
19.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
19.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
19.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
19.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
19.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
19.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
19.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
18.6
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
18.5
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
18.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
18.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
18.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
18.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
17.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
17.7
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
17.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
17.5
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
16.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
16.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
15.8
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
15.6
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
15.5
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
15.4
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
15.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
15.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
15.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.1
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
15.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
14.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
14.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
14.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
14.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
14.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
13.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
13.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
13.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
13.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
13.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
13.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
12.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
12.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
12.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
12.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
12.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
12.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
11.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
11.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
10.8
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
10.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
10.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
10.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
10.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
9.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
9.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
9.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
9.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
9.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
8.8
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
8.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
8.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
8.4
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
7.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
7.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
7.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
7.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.4
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
4.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
4.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGFBP3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
88.5
Number of samples
231
Samples
Sample
Description
TPM
DO45245
0 years, female, NA, stage:2, dead, 240 days
1054.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
831.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
809.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
682.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
424.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
412.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
399.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
368.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
363.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
317.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
315.6
DO45092
0 years, male, NA, stage:4, dead, 1200 days
282.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
275.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
271.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
271.2
DO45231
0 years, male, NA, stage:2, alive, 930 days
259.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
257.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
249.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
248.1
DO45103
0 years, male, NA, stage:3, alive, 450 days
242.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
222.0
DO23524
0 years, female, NA, stage:2, alive, 1050 days
219.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
202.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
202.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
198.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
194.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
184.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
168.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
168.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
167.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
161.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
160.7
DO45201
0 years, male, NA, stage:1, alive, 900 days
155.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
152.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
151.9
DO48760
0 years, female, NA, stage:2, alive, 690 days
149.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
143.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
140.9
DO45107
0 years, female, NA, stage:2, alive, 1710 days
135.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
130.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
129.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
129.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
128.4
DO45305
0 years, male, NA, stage:4, alive, 300 days
127.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
126.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
120.9
DO23515
0 years, male, NA, stage:2, alive, 1230 days
120.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
119.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
116.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
115.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
115.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
114.6
DO45183
0 years, female, NA, stage:2, dead, 570 days
114.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
113.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
109.9
DO50845
0 years, male, NA, stage:3, alive, 210 days
103.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
102.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
101.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
99.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
95.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
92.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
92.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
91.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
90.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
90.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
89.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
88.8
DO45159
0 years, male, NA, stage:3, alive, 1470 days
88.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
88.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
87.9
DO45285
0 years, male, NA, stage:3, alive, 480 days
87.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
86.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
86.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
86.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
84.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
84.2
DO48761
0 years, male, NA, stage:2, alive, 870 days
81.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
79.0
DO45283
0 years, male, NA, stage:3, alive, 510 days
78.0
DO45247
0 years, female, NA, stage:2, alive, 210 days
77.9
DO50798
0 years, male, NA, stage:3, dead, 30 days
76.2
DO50832
0 years, male, NA, stage:3, alive, 90 days
75.6
DO45269
0 years, male, NA, stage:3, alive, 750 days
72.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
72.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
72.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
70.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
70.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
68.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
68.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
67.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
67.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
67.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
66.7
DO45249
0 years, male, NA, stage:1, alive, 630 days
66.1
DO50785
0 years, male, NA, stage:4, dead, 90 days
65.2
DO48701
0 years, male, NA, stage:2, alive, 780 days
63.8
DO45203
0 years, female, NA, stage:2, alive, 1170 days
63.4
DO227801
0 years, female, NA, stage:1, alive, 660 days
62.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
61.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
58.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
57.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
57.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
55.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
55.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
54.4
DO45139
0 years, male, NA, stage:3, alive, 1320 days
54.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
53.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
52.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
52.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
51.3
DO23508
0 years, female, NA, stage:2, alive, 390 days
50.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
50.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
49.2
DO45303
0 years, female, NA, stage:3, alive, 990 days
48.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
48.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
48.5
DO23528
0 years, female, NA, stage:2, alive, 1020 days
47.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
46.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
46.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
46.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
45.1
DO45185
0 years, male, NA, stage:2, alive, 600 days
44.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
43.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
42.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
42.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
41.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
41.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
39.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
39.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
38.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
38.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
37.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
37.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
37.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
36.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
36.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
35.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
34.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
34.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
33.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
33.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
33.0
DO45135
0 years, male, NA, stage:1, alive, 1410 days
30.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
29.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
29.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
29.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
28.2
DO48757
0 years, female, NA, stage:3, alive, 480 days
28.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
27.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
27.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
27.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
27.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
27.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
27.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
26.7
DO48741
0 years, male, NA, stage:3, alive, 240 days
26.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
26.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
25.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
25.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
24.3
DO45117
0 years, female, NA, stage:2, dead, 1110 days
24.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
23.3
DO45217
0 years, female, NA, stage:3, dead, 270 days
23.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
22.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
22.4
DO45145
0 years, male, NA, stage:3, dead, 60 days
22.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
22.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
21.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
21.6
DO45287
0 years, male, NA, stage:1, alive, 390 days
21.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
21.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
20.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
20.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
20.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
19.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
19.6
DO50820
0 years, female, NA, stage:3, alive, 510 days
18.8
DO48732
0 years, male, NA, stage:3, alive, 630 days
18.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
18.5
DO23542
0 years, male, NA, stage:3, alive, 960 days
17.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
17.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
17.1
DO48693
0 years, male, NA, stage:2, alive, 900 days
17.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
16.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
16.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
16.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
15.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
15.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
15.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
14.7
DO48751
0 years, male, NA, stage:2, dead, 480 days
14.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
13.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
13.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
13.3
DO45175
0 years, male, NA, stage:2, alive, 1140 days
13.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
12.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
11.9
DO45161
0 years, male, NA, stage:2, dead, 540 days
11.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
11.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
11.6
DO50817
0 years, male, NA, stage:2, alive, 390 days
11.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
11.4
DO48721
0 years, female, NA, stage:1, alive, 900 days
11.4
DO45133
0 years, male, NA, stage:3, dead, 660 days
11.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
10.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
10.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
10.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
10.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
9.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
9.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
8.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
8.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
7.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
7.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
7.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
7.3
DO48677
0 years, male, NA, stage:3, alive, 1140 days
7.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
6.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
5.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
5.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
4.8
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
4.4
DO50825
0 years, male, NA, stage:2, alive, 390 days
4.4
DO48706
0 years, male, NA, stage:2, alive, 870 days
3.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
3.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
2.7
DO48695
0 years, male, NA, stage:2, alive, 720 days
1.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
573
Tumor
2.8
192
Normal
2.3
343
Tumor
2.2
743
Tumor
2.0
393
Tumor
1.9
375
Tumor
1.8
535
Tumor
1.7
425
Tumor
1.7
877
Tumor
1.5
125
Tumor
1.3
545
Tumor
1.2
874
Normal
1.1
983
Tumor
1.1
297
Tumor
1.0
471
Tumor
0.9
491
Tumor
0.8
823
Tumor
0.8
131
Tumor
0.8
516
Normal
0.8
745
Tumor
0.7
697
Tumor
0.7
1044
Normal
0.7
951
Tumor
0.6
367
Tumor
0.6
538
Normal
0.6
355
Tumor
0.6
124
Normal
0.5
536
Normal
0.5
744
Normal
0.5
554
Normal
0.5
311
Tumor
0.5
953
Tumor
0.5
1045
Tumor
0.5
952
Normal
0.5
878
Normal
0.5
671
Tumor
0.5
884
Normal
0.5
492
Normal
0.5
523
Tumor
0.4
817
Tumor
0.4
463
Tumor
0.4
862
Normal
0.4
386
Normal
0.4
866
Normal
0.4
958
Normal
0.4
312
Normal
0.4
921
Tumor
0.4
815
Tumor
0.4
285
Tumor
0.4
474
Normal
0.4
851
Tumor
0.4
344
Normal
0.4
136
Normal
0.4
224
Normal
0.4
1028
Normal
0.4
146
Normal
0.3
1046
Normal
0.3
546
Normal
0.3
448
Normal
0.3
642
Normal
0.3
388
Normal
0.3
214
Normal
0.3
368
Normal
0.3
366
Normal
0.3
452
Normal
0.3
816
Normal
0.3
1025
Tumor
0.3
914
Normal
0.3
223
Tumor
0.3
746
Normal
0.3
957
Tumor
0.3
362
Normal
0.3
956
Normal
0.3
918
Normal
0.3
498
Normal
0.2
524
Normal
0.2
283
Tumor
0.2
126
Normal
0.2
185
Tumor
0.2
257
Tumor
0.2
142
Normal
0.2
217
Tumor
0.2
434
Normal
0.2
967
Tumor
0.2
218
Normal
0.2
385
Tumor
0.2
628
Normal
0.2
396
Normal
0.2
456
Normal
0.2
976
Normal
0.2
392
Normal
0.2
394
Normal
0.2
268
Normal
0.2
313
Tumor
0.2
618
Normal
0.2
455
Tumor
0.2
376
Normal
0.1
517
Tumor
0.1
526
Normal
0.1
232
Normal
0.1
944
Normal
0.1
258
Normal
0.1
212
Normal
0.1
685
Tumor
0.1
466
Normal
0.1
527
Tumor
0.1
138
Normal
0.1
415
Tumor
0.1
938
Normal
0.1
384
Normal
0.1
272
Normal
0.1
881
Tumor
0.1
574
Normal
0.1
354
Normal
0.1
352
Normal
0.1
412
Normal
0.1
391
Tumor
0.0
924
Normal
0.0
342
Normal
0.0
864
Normal
0.0
111
Normal
0.0
572
Normal
0.0
416
Normal
0.0
553
Tumor
0.0
433
Tumor
0.0
132
Normal
0.0
331
Tumor
0.0
954
Normal
0.0
975
Tumor
0.0
558
Normal
0.0
213
Tumor
0.0
713
Tumor
0.0
813
Tumor
0.0
221
Tumor
0.0
917
Tumor
0.0
188
Normal
0.0
636
Normal
0.0
922
Normal
0.0
714
Normal
0.0
468
Normal
0.0
964
Normal
0.0
436
Normal
0.0
395
Tumor
0.0
852
Normal
0.0
228
Normal
0.0
484
Normal
0.0
298
Normal
0.0
966
Normal
-0.1
478
Normal
-0.1
186
Normal
-0.1
363
Tumor
-0.1
447
Tumor
-0.1
196
Normal
-0.1
518
Normal
-0.1
444
Normal
-0.1
537
Tumor
-0.1
955
Tumor
-0.1
778
Normal
-0.1
387
Tumor
-0.1
865
Tumor
-0.1
737
Tumor
-0.1
222
Normal
-0.1
262
Normal
-0.1
534
Normal
-0.1
698
Normal
-0.1
883
Tumor
-0.1
868
Normal
-0.1
383
Tumor
-0.1
672
Normal
-0.1
857
Tumor
-0.1
981
Tumor
-0.1
785
Tumor
-0.1
162
Normal
-0.1
1022
Normal
-0.1
616
Normal
-0.1
148
Normal
-0.1
716
Normal
-0.1
428
Normal
-0.1
968
Normal
-0.1
461
Tumor
-0.1
662
Normal
-0.1
464
Normal
-0.1
858
Normal
-0.2
882
Normal
-0.2
525
Tumor
-0.2
943
Tumor
-0.2
686
Normal
-0.2
818
Normal
-0.2
715
Tumor
-0.2
568
Normal
-0.2
916
Normal
-0.2
923
Tumor
-0.2
696
Normal
-0.2
1026
Normal
-0.2
114
Normal
-0.2
137
Tumor
-0.2
195
Tumor
-0.2
963
Tumor
-0.2
443
Tumor
-0.2
567
Tumor
-0.2
648
Normal
-0.2
286
Normal
-0.2
365
Tumor
-0.2
271
Tumor
-0.2
824
Normal
-0.2
738
Normal
-0.3
494
Normal
-0.3
446
Normal
-0.3
422
Normal
-0.3
135
Tumor
-0.3
161
Tumor
-0.3
414
Normal
-0.3
284
Normal
-0.3
472
Normal
-0.3
141
Tumor
-0.3
786
Normal
-0.3
515
Tumor
-0.3
364
Normal
-0.3
172
Normal
-0.3
514
Normal
-0.3
128
Normal
-0.3
563
Tumor
-0.3
278
Normal
-0.3
742
Normal
-0.3
1021
Tumor
-0.3
564
Normal
-0.3
982
Normal
-0.3
1041
Tumor
-0.3
467
Tumor
-0.3
1027
Tumor
-0.4
356
Normal
-0.4
664
Normal
-0.4
666
Normal
-0.4
1016
Normal
-0.4
426
Normal
-0.4
873
Tumor
-0.4
722
Normal
-0.4
483
Tumor
-0.4
497
Tumor
-0.4
926
Normal
-0.4
351
Tumor
-0.4
912
Normal
-0.4
1032
Normal
-0.4
723
Tumor
-0.4
528
Normal
-0.4
661
Tumor
-0.4
462
Normal
-0.4
814
Normal
-0.4
493
Tumor
-0.4
1042
Normal
-0.5
328
Normal
-0.5
424
Normal
-0.5
647
Tumor
-0.5
227
Tumor
-0.5
361
Tumor
-0.5
728
Normal
-0.5
421
Tumor
-0.5
358
Normal
-0.5
432
Normal
-0.5
187
Tumor
-0.5
721
Tumor
-0.5
488
Normal
-0.6
191
Tumor
-0.6
487
Tumor
-0.6
211
Tumor
-0.6
695
Tumor
-0.6
867
Tumor
-0.6
261
Tumor
-0.6
635
Tumor
-0.6
617
Tumor
-0.6
615
Tumor
-0.6
756
Normal
-0.6
1043
Tumor
-0.6
1015
Tumor
-0.6
984
Normal
-0.6
627
Tumor
-0.7
112
Tumor
-0.7
1014
Normal
-0.7
314
Normal
-0.7
482
Normal
-0.7
145
Tumor
-0.7
571
Tumor
-0.7
341
Tumor
-0.7
978
Normal
-0.7
913
Tumor
-0.7
451
Tumor
-0.7
863
Tumor
-0.7
477
Tumor
-0.8
663
Tumor
-0.8
977
Tumor
-0.8
557
Tumor
-0.8
413
Tumor
-0.8
277
Tumor
-0.8
641
Tumor
-0.8
513
Tumor
-0.8
332
Normal
-0.8
113
Tumor
-0.9
665
Tumor
-0.9
147
Tumor
-0.9
327
Tumor
-0.9
755
Tumor
-0.9
357
Tumor
-0.9
473
Tumor
-0.9
353
Tumor
-0.9
965
Tumor
-0.9
1031
Tumor
-0.9
427
Tumor
-0.9
445
Tumor
-0.9
727
Tumor
-0.9
171
Tumor
-0.9
777
Tumor
-1.0
1013
Tumor
-1.0
431
Tumor
-1.1
861
Tumor
-1.1
481
Tumor
-1.1
231
Tumor
-1.2
465
Tumor
-1.2
741
Tumor
-1.2
127
Tumor
-1.2
123
Tumor
-1.2
435
Tumor
-1.2
267
Tumor
-1.2
915
Tumor
-1.2
937
Tumor
-1.2
423
Tumor
-1.2
724
Normal
-1.3
411
Tumor
-1.3
911
Tumor
-1.4
533
Tumor
-1.4
925
Tumor
-1.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.