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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZMAT2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.5
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
159.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
146.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
135.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
122.3
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
119.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
114.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
112.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
112.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
111.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
106.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
101.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
91.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
91.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
91.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
91.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
86.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
84.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
81.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
78.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
75.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
75.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
69.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
69.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
68.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
66.5
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
65.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
63.7
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
63.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
63.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
62.8
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
62.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
60.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
57.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
55.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
54.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
49.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
48.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
48.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
47.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
46.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
45.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
44.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
44.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
43.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
43.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
42.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
42.0
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
41.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
40.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
40.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
38.1
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
33.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
31.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
30.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
30.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
28.8
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
28.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
27.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
25.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
24.4
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
23.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
23.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
23.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZMAT2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
69.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
177.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
131.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
131.9
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
131.8
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
131.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
128.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
128.3
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
123.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
123.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
120.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
114.7
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
114.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
111.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
111.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
111.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
111.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
111.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
110.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
110.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
108.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
108.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
107.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
107.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
107.4
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
106.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
106.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
105.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
104.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
103.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
102.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
101.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
101.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
101.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
101.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
101.4
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
101.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
101.3
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
101.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
101.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
100.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
100.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
100.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
100.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
100.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
100.2
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
99.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
98.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
98.6
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
98.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
98.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
98.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
97.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
96.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
96.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
95.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
94.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
93.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
93.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
93.6
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
93.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
93.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
93.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
93.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
92.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
92.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
92.5
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
92.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
92.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
92.4
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
92.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
92.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
92.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
91.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
91.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
91.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
91.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
90.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
90.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
90.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
90.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
90.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
89.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
89.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
89.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
89.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
89.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
89.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
89.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
89.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
89.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
88.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
88.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
88.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
88.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
88.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
88.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
88.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
88.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
88.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
87.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
87.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
87.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
87.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
87.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
87.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
87.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
87.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
87.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
86.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
86.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
86.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
86.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
86.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
86.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
86.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
86.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
86.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
85.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
85.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
85.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
85.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
85.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
85.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
84.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
84.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
84.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
84.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
84.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
84.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
83.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
83.7
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
83.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
83.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
83.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
83.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
83.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
83.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
83.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
83.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
82.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
82.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
82.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
82.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
82.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
81.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
81.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
81.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
81.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
81.5
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
81.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
81.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
81.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
81.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
81.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
81.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
81.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
81.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
80.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
80.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
80.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
80.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
80.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
80.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
80.5
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
80.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
80.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
80.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
80.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
79.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
79.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
79.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
79.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
79.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
79.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
79.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
79.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
79.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
79.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
79.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
78.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
78.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
78.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
78.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
78.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
78.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
78.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
77.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
77.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
77.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
77.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
76.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
76.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
76.5
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
76.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
76.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
76.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
76.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
76.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
75.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
75.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
75.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
75.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
75.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
75.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
75.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
75.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
75.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
75.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
74.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
74.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
74.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
74.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
74.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
74.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
73.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
73.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
73.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
73.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
73.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
73.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
73.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
73.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
73.6
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
73.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
73.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
73.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
73.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
73.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
72.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
72.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
72.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
72.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
72.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
72.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
72.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
72.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
72.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
72.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
72.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
72.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
72.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
72.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
71.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
71.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
71.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
71.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
71.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
71.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
71.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
70.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
70.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
70.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
70.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
70.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
70.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
70.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
69.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
69.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
69.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
69.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
69.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
69.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
69.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
69.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
69.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
69.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
69.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
69.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
69.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
69.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
68.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
68.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
68.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
68.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
68.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
68.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
68.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
68.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
67.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
67.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
67.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
67.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
67.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
67.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
67.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
67.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
66.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
66.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
66.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
66.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
66.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
65.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
65.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
65.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
65.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
65.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
65.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
65.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
65.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
65.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
65.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
65.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
65.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
64.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
64.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
64.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
64.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
64.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
64.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
64.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
64.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
63.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
63.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
63.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
63.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
63.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
63.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
63.1
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
63.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
63.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
63.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
62.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
62.8
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
62.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
62.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
62.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
62.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
62.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
62.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
62.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
62.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
61.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
61.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
61.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
61.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
61.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
61.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
61.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
60.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
60.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
60.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
60.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
60.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
60.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
60.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
60.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
60.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
59.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
59.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
59.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
59.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
59.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
58.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
58.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
58.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
58.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
58.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
58.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
58.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
58.2
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
58.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
57.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
57.7
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
57.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
57.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
57.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
57.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
57.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
57.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
57.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
57.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
57.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
56.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
56.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
56.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
56.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
56.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
56.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
56.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
56.3
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
56.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
56.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
56.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
56.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
55.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
55.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
55.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
55.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
55.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
55.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
55.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
55.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
55.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
55.3
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
55.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
55.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
55.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
55.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
54.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
54.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
54.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
54.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
54.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
54.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
53.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
52.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
52.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
52.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
52.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
52.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
52.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
52.4
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
52.1
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
52.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
51.9
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
51.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
51.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
51.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
51.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
51.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
51.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
51.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
51.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
50.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
50.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
50.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
50.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
50.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
50.2
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
50.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
50.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
50.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
49.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
49.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
49.6
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
49.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
49.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
49.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
49.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
49.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
48.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
48.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
48.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
48.7
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
48.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
48.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
48.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
47.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
47.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
47.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
47.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
47.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
46.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
46.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
46.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
45.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
45.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
44.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
44.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
44.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
44.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
44.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
44.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
44.3
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
44.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
43.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
43.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
43.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
42.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
42.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
42.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
42.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
42.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
41.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
41.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
40.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
40.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
40.1
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
40.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
39.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
39.7
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
39.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
39.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
39.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
39.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
39.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
39.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
38.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
38.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
38.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
37.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
36.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
36.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
36.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
36.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
35.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
35.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
34.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
34.4
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
33.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
32.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
32.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
31.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
31.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
31.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
31.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
30.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
30.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
29.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
28.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
27.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
27.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
25.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
25.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
24.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
22.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
21.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
19.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
18.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
18.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZMAT2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
72.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
120.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
108.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
107.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
106.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
105.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
102.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
102.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
100.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
98.9
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
98.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
97.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
94.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
94.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
92.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
91.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
89.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
89.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
88.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
87.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
87.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
87.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
86.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
85.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
85.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
85.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
84.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
83.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
81.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
81.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
79.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
79.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
79.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
78.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
78.6
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
78.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
78.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
77.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
77.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
77.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
76.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
76.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
75.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
75.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
74.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
72.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
72.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
71.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
71.8
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
71.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
71.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
71.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
70.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
70.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
70.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
68.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
68.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
68.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
68.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
68.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
68.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
67.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
66.9
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
66.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
65.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
64.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
64.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
64.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
64.0
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
63.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
62.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
62.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
61.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
61.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
61.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
61.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
60.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
60.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
59.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
59.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
58.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
58.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
57.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
55.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
55.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
55.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
54.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
54.0
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
53.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
53.1
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
51.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
50.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
49.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
48.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
42.5
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
41.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
38.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
38.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
37.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
35.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZMAT2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
59.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
187.8
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
165.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
139.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
130.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
130.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
128.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
124.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
120.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
119.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
118.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
106.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
106.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
104.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
103.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
102.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
98.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
97.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
96.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
95.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
95.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
94.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
94.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
92.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
91.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
91.0
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
90.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
90.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
89.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
88.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
88.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
87.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
86.9
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
85.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
85.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
83.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
83.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
83.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
82.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
81.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
81.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
80.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
80.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
79.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
79.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
78.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
77.5
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
77.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
77.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
76.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
76.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
76.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
75.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
75.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
75.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
75.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
74.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
74.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
74.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
73.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
73.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
73.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
73.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
73.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
71.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
71.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
71.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
70.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
70.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
70.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
70.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
70.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
69.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
69.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
69.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
68.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
68.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
68.2
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
67.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
67.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
66.9
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
66.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
65.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
65.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
65.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
65.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
64.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
64.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
64.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
64.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
64.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
64.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
63.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
63.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
63.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
63.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
62.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
62.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
62.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
62.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
62.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
62.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
62.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
61.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
61.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
61.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
61.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
61.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
61.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
61.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
61.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
61.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
61.0
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
61.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
60.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
60.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
60.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
60.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
59.8
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
59.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
59.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
59.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
59.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
59.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
59.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
59.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
59.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
59.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
59.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
58.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
58.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
58.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
58.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
58.2
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
57.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
57.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
57.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
57.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
57.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
57.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
57.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
57.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
57.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
56.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
56.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
55.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
55.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
55.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
55.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
55.4
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
55.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
55.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
54.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
54.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
54.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
54.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
54.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
54.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
54.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
53.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
53.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
53.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
53.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
53.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
53.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
52.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
52.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
52.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
52.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
52.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
52.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
52.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
52.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
51.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
51.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
51.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
51.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
51.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
51.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
51.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
50.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
50.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
50.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
50.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
49.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
49.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
49.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
49.6
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
49.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
49.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
48.8
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
48.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
48.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
47.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
47.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
47.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
47.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
47.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
47.1
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
46.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
46.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
46.5
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
46.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
46.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
46.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
45.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
45.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
44.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
44.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
44.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
44.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
44.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
44.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
44.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
43.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
43.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
43.5
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
43.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
42.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
41.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
41.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
41.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
41.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
41.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
40.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
40.6
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
40.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
39.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
39.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
39.6
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
39.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
39.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
39.3
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
39.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
38.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
38.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
37.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
37.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
37.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
37.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
36.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
36.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
36.4
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
36.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
35.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
35.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
34.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
34.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
34.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
33.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
33.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
33.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
33.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
33.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
33.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
32.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
32.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
31.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
31.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
30.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
30.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
29.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
29.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
28.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
28.2
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
26.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
25.1
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
24.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
24.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
24.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
23.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
23.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
23.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
23.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
21.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
20.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
18.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
17.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
17.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
16.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
15.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
14.2
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078990003
Tumor
0.7
CPT0088760003
Tumor
0.6
CPT0086820003
Tumor
0.5
CPT0001270001
Normal
0.5
CPT0001340003
Tumor
0.5
CPT0081600003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0086870003
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0075720003
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0014370004
Tumor
0.4
CPT0079380003
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0063630003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0075130003
Tumor
0.4
CPT0088900003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0085670003
Tumor
0.3
CPT0092160003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0001260009
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0079300001
Normal
0.3
CPT0025880003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0088630003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0009060003
Tumor
0.3
CPT0088690003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0006440003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0015730003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0025170003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0075170001
Normal
0.2
CPT0000640003
Tumor
0.2
CPT0089020003
Tumor
0.2
CPT0001180009
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0014130001
Normal
0.2
CPT0077110003
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0026410003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0025230003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0001230001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0065930003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0065690003
Tumor
0.1
CPT0092740003
Normal
0.1
CPT0014470001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0015910003
Tumor
0.1
CPT0077490003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0019130003
Tumor
0.1
CPT0088970003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0000660001
Normal
0.1
CPT0023710001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0088780001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0078840001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0025920001
Normal
0.0
CPT0010110003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0012900004
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0025060001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0078530001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0000790001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0078660003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0017850003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0014350001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0069160003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0092290003
Tumor
-0.1
CPT0000890001
Normal
-0.1
CPT0012080003
Tumor
-0.1
CPT0066520001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0086970003
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0077310003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0009000003
Tumor
-0.2
CPT0078800003
Tumor
-0.2
CPT0077500001
Normal
-0.2
CPT0069190001
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0078670001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0065810003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0009080003
Normal
-0.2
CPT0092790003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0011410003
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0069010001
Normal
-0.3
CPT0002270011
Tumor
-0.3
CPT0001500009
Tumor
-0.3
CPT0012290003
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0017450001
Normal
-0.3
CPT0079180003
Tumor
-0.3
CPT0012670003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0012550003
Tumor
-0.3
CPT0082010001
Normal
-0.3
CPT0025610001
Normal
-0.3
CPT0007860003
Tumor
-0.4
CPT0014160003
Tumor
-0.4
CPT0018250001
Normal
-0.4
CPT0013790003
Normal
-0.6
CPT0024680001
Normal
-0.6
CPT0078510003
Tumor
-0.6
CPT0012770003
Normal
-0.7
CPT0011240003
Tumor
-0.7
CPT0012570003
Normal
-0.8
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.