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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BTF3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
285.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
1257.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
595.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
541.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
528.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
508.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
480.2
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
463.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
434.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
402.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
391.9
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
391.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
389.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
367.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
363.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
360.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
354.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
344.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
335.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
329.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
320.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
309.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
305.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
302.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
299.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
293.9
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
287.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
286.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
281.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
280.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
280.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
277.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
254.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
254.3
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
236.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
232.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
231.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
223.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
223.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
221.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
216.7
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
212.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
211.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
207.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
198.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
194.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
193.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
191.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
190.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
185.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
178.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
170.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
160.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
159.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
155.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
150.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
147.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
131.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
128.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
127.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
126.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
112.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
108.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
94.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BTF3 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
575.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
1643.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
1389.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
1182.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
1159.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
1130.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
1092.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
1060.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
1056.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
1002.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
998.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
994.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
968.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
962.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
956.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
953.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
941.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
937.8
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
934.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
933.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
932.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
928.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
925.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
915.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
908.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
900.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
883.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
880.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
879.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
878.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
869.7
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
858.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
856.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
853.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
851.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
850.8
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
850.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
847.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
846.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
844.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
843.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
843.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
839.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
835.6
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
831.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
831.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
830.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
829.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
829.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
828.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
813.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
813.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
812.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
812.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
809.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
807.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
805.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
804.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
803.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
799.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
798.4
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
797.1
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
797.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
793.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
785.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
785.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
783.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
783.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
782.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
781.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
780.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
780.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
778.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
776.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
774.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
774.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
774.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
773.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
770.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
766.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
764.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
761.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
760.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
758.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
757.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
755.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
755.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
752.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
751.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
746.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
743.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
742.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
741.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
740.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
738.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
737.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
735.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
731.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
731.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
731.0
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
729.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
728.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
728.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
727.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
727.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
726.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
725.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
721.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
719.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
718.2
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
717.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
717.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
716.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
716.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
715.1
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
714.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
709.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
709.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
709.2
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
709.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
706.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
704.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
703.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
701.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
700.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
697.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
694.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
694.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
692.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
691.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
691.1
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
690.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
689.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
686.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
686.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
685.7
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
684.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
683.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
683.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
682.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
681.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
680.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
678.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
678.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
677.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
677.2
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
675.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
675.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
675.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
674.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
673.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
669.5
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
668.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
667.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
666.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
666.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
666.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
666.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
665.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
664.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
664.3
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
663.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
662.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
660.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
660.3
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
659.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
658.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
658.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
657.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
653.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
651.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
648.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
648.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
645.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
645.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
645.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
642.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
641.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
640.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
640.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
640.1
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
639.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
638.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
638.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
636.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
635.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
633.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
633.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
633.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
629.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
628.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
627.1
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
625.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
625.5
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
625.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
623.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
623.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
621.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
621.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
620.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
620.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
617.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
615.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
615.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
613.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
613.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
613.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
611.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
611.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
610.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
609.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
609.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
606.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
604.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
604.2
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
602.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
600.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
599.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
599.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
597.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
596.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
594.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
594.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
592.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
591.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
589.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
588.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
587.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
587.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
587.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
586.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
586.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
585.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
584.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
584.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
584.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
583.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
583.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
582.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
581.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
580.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
579.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
579.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
579.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
578.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
577.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
575.0
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
574.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
573.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
572.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
571.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
571.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
571.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
570.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
570.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
570.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
569.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
568.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
566.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
566.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
563.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
563.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
562.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
562.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
561.7
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
561.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
561.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
558.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
558.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
556.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
555.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
555.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
554.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
554.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
553.7
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
553.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
552.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
551.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
551.4
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
550.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
549.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
549.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
547.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
546.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
546.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
546.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
545.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
544.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
544.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
543.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
543.8
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
543.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
542.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
542.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
541.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
541.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
539.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
539.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
538.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
538.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
538.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
538.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
537.5
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
536.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
535.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
534.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
534.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
533.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
533.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
529.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
529.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
528.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
527.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
527.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
525.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
525.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
525.0
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
524.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
523.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
522.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
522.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
521.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
521.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
520.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
520.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
520.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
519.9
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
519.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
518.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
518.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
517.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
517.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
517.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
517.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
514.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
511.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
510.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
510.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
510.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
509.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
509.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
509.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
508.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
508.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
506.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
505.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
505.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
502.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
500.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
500.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
499.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
499.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
498.7
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
497.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
495.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
494.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
493.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
491.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
491.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
491.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
490.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
490.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
489.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
488.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
488.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
487.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
485.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
485.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
484.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
484.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
483.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
482.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
481.1
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
480.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
479.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
478.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
476.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
475.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
475.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
473.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
471.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
471.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
470.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
468.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
467.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
465.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
464.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
464.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
463.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
462.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
461.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
460.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
459.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
458.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
457.9
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
457.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
455.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
454.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
447.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
447.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
446.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
444.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
444.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
443.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
439.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
435.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
435.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
434.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
433.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
433.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
432.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
430.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
429.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
427.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
427.4
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
425.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
424.6
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
423.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
422.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
422.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
419.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
414.7
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
412.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
410.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
408.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
403.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
402.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
400.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
396.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
396.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
393.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
389.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
388.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
387.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
387.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
386.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
385.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
382.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
382.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
379.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
374.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
373.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
372.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
371.2
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
370.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
368.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
367.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
367.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
365.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
365.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
364.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
363.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
361.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
360.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
358.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
356.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
353.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
349.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
347.1
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
346.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
346.3
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
345.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
344.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
338.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
337.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
337.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
335.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
333.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
327.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
326.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
326.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
325.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
325.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
323.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
321.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
317.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
317.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
312.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
307.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
304.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
301.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
301.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
297.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
291.5
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
290.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
285.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
284.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
284.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
283.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
274.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
274.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
272.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
269.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
262.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
261.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
254.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
253.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
251.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
250.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
249.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
248.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
247.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
246.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
244.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
243.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
237.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
236.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
234.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
225.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
222.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
200.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
197.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
196.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
187.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
184.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
170.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
163.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
155.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
150.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
143.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
113.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BTF3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
622.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
1485.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
1313.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
1069.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
1034.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
1009.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
1000.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
981.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
978.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
948.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
915.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
883.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
866.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
847.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
840.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
836.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
780.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
775.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
772.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
739.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
730.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
719.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
718.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
711.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
707.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
707.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
705.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
699.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
698.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
669.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
669.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
668.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
655.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
642.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
637.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
636.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
632.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
627.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
623.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
617.6
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
612.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
603.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
602.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
599.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
599.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
599.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
596.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
593.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
592.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
592.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
590.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
588.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
586.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
581.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
579.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
575.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
574.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
570.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
568.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
563.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
544.5
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
542.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
542.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
542.0
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
540.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
537.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
534.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
532.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
529.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
526.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
526.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
520.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
514.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
512.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
511.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
508.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
507.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
491.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
489.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
487.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
487.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
484.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
479.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
462.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
461.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
449.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
439.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
438.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
436.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
427.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
422.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
417.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
415.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
411.3
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
403.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
363.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
362.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
290.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
287.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
284.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BTF3 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
387.5
Number of samples
282
Samples
Sample
Description
TPM
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
1140.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
869.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
835.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
791.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
784.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
777.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
766.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
761.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
751.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
749.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
729.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
726.3
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
721.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
719.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
714.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
706.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
702.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
690.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
687.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
686.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
686.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
672.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
659.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
651.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
650.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
649.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
647.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
634.8
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
620.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
615.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
603.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
598.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
594.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
594.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
591.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
591.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
591.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
582.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
573.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
558.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
558.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
557.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
549.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
546.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
543.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
540.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
537.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
532.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
531.2
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
520.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
513.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
510.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
507.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
500.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
500.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
499.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
497.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
496.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
495.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
483.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
479.8
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
477.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
475.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
474.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
473.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
473.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
471.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
471.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
465.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
463.0
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
460.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
460.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
459.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
458.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
458.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
456.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
455.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
454.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
453.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
452.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
452.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
451.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
450.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
448.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
447.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
441.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
440.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
439.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
439.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
437.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
436.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
436.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
435.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
434.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
430.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
428.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
428.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
425.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
422.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
421.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
421.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
419.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
417.4
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
416.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
416.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
411.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
411.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
409.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
408.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
407.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
406.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
406.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
405.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
405.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
404.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
403.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
402.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
401.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
401.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
401.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
396.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
395.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
394.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
393.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
393.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
390.8
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
390.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
390.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
389.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
388.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
387.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
386.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
377.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
376.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
376.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
373.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
373.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
372.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
370.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
369.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
367.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
367.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
367.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
366.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
366.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
365.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
364.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
364.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
363.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
363.4
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
360.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
359.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
358.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
357.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
355.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
354.6
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
353.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
349.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
348.0
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
345.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
345.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
341.8
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
341.5
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
340.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
340.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
340.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
338.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
337.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
333.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
330.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
330.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
328.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
327.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
323.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
323.4
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
323.0
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
322.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
320.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
318.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
318.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
318.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
317.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
316.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
312.4
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
311.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
311.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
310.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
308.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
306.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
304.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
303.7
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
301.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
298.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
296.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
295.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
294.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
294.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
293.9
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
292.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
290.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
288.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
288.3
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
287.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
287.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
286.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
283.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
283.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
283.1
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
282.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
282.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
278.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
277.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
273.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
270.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
269.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
268.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
266.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
266.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
265.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
264.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
264.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
260.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
259.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
256.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
256.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
255.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
255.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
251.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
247.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
246.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
246.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
243.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
236.8
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
236.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
233.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
232.9
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
232.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
232.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
230.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
229.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
227.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
226.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
225.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
221.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
220.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
216.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
215.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
214.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
208.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
208.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
197.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
192.6
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
191.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
190.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
189.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
189.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
188.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
186.8
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
184.2
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
183.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
182.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
180.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
171.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
170.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
162.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
162.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
160.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
157.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
155.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
152.7
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
152.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
150.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
143.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
133.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
116.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
98.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
94.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
81.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
77.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
66.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
63.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012550003
Tumor
0.7
CPT0001340003
Tumor
0.7
CPT0025880003
Tumor
0.6
CPT0065430003
Tumor
0.5
CPT0086950003
Tumor
0.4
CPT0077110003
Tumor
0.4
CPT0088550004
Tumor
0.4
CPT0071150004
Tumor
0.4
CPT0010160003
Tumor
0.4
CPT0011240003
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0065870003
Tumor
0.3
CPT0001270001
Normal
0.3
CPT0012180003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0078830003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0088970003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0078660003
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0065690003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0025110003
Tumor
0.2
CPT0015810003
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0014470001
Normal
0.2
CPT0023350003
Tumor
0.2
CPT0086820003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0012370003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0012080003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0024680001
Normal
0.1
CPT0020020001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0084560003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0012670003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0092190003
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0086030003
Tumor
0.1
CPT0079270003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0078800003
Tumor
0.1
CPT0001260009
Tumor
0.1
CPT0012770003
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0092740003
Normal
0.1
CPT0065450001
Normal
0.1
CPT0088780001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0086870003
Tumor
0.1
CPT0076350001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0077310003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0078990003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0075170001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0006730001
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0001190001
Normal
0.0
CPT0007870001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0077320001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0006950001
Normal
0.0
CPT0088900003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0078940001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0079300001
Normal
0.0
CPT0087050003
Normal
0.0
CPT0078840001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0086830003
Normal
0.0
CPT0063640001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0064400001
Normal
0.0
CPT0088640003
Normal
0.0
CPT0017450001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0092160003
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0079000001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0009060003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0075570001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0065810003
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0001230001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0025920001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0092290003
Tumor
-0.2
CPT0002270011
Tumor
-0.2
CPT0019130003
Tumor
-0.2
CPT0081880003
Tumor
-0.2
CPT0088570001
Normal
-0.2
CPT0012290003
Normal
-0.2
CPT0014160003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0001510001
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0011410003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0009020003
Normal
-0.3
CPT0076330003
Tumor
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
