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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC30A5 is potential prognostic, high expression is unfavorable in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
58.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
56.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
43.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
41.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
40.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
37.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
37.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
35.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
35.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
33.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
33.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
31.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
31.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
29.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
28.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
28.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
28.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
27.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
27.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
26.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
25.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
25.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
24.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
23.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
22.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
22.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
21.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
21.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
20.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
20.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
20.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
19.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
19.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
19.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
19.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
19.2
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
19.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
18.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
18.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
18.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
17.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
17.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
17.1
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
16.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
16.6
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
15.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
15.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
15.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
15.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
15.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
14.5
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
14.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
12.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
12.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
11.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.6
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
10.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
10.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
10.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC30A5 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
27.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
156.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
133.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
57.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
53.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
53.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
52.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
50.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
48.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
48.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
47.7
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
47.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
47.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
47.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
47.4
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
47.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
47.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
46.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
45.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
44.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
44.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
43.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
43.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
43.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
42.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
42.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
42.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
41.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
41.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
41.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
41.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
41.1
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
41.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
40.8
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
40.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
40.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
39.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
39.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
39.6
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
39.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
39.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
39.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
38.7
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
38.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
38.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
38.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
38.2
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
37.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
37.9
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
37.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
37.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
37.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
37.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
37.5
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
37.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
37.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
37.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
37.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
37.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
37.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
37.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
36.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
36.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
36.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
36.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
36.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
36.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
36.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
36.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
35.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
35.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
35.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
35.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
35.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
35.7
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
35.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
35.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
35.2
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
35.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
35.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
35.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
35.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
35.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
35.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
34.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
34.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
34.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
34.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
34.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
33.9
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
33.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
33.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
33.4
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
33.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
33.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
33.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
33.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
33.0
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
32.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
32.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
32.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
32.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
32.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
32.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
32.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
32.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
32.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
32.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
32.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
32.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
32.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
32.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
32.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
32.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
32.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
32.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
31.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
31.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
31.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
31.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
31.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
31.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
31.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
31.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
31.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
31.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
31.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
31.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
31.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
31.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
31.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
31.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
31.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
31.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
31.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
31.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
31.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
30.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
30.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
30.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
30.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
30.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
30.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
30.5
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
30.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
30.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
30.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
30.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
30.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
30.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
30.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
30.2
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
30.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
30.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
30.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
30.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
30.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
30.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
30.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
30.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
29.9
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
29.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
29.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
29.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
29.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
29.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
29.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
29.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
29.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
29.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
29.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
29.4
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
29.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
29.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
29.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
29.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
29.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
29.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
29.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
29.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
29.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
29.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
29.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
29.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
29.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
28.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
28.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
28.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
28.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
28.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
28.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
28.7
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
28.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
28.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
28.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
28.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
28.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
28.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
28.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
28.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
28.2
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
28.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
28.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
28.1
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
28.1
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
28.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
28.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
28.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
28.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
27.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
27.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
27.8
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
27.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
27.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
27.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
27.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
27.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
27.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
27.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
27.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
27.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
27.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
27.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
27.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
27.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
27.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
27.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
27.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
27.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
27.2
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
27.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
27.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
27.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
27.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
26.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
26.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
26.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
26.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
26.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
26.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
26.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
26.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
26.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
26.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
26.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
26.4
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
26.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
26.3
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
26.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
26.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
26.2
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
26.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
26.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
26.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
26.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
26.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
25.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.9
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
25.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
25.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
25.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
25.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
25.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
25.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
25.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
25.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
25.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
25.3
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
25.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
25.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
25.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
25.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
25.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
25.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
25.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
24.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
24.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
24.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
24.8
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
24.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
24.7
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
24.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
24.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
24.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
24.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
24.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
24.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
24.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
24.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
24.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
24.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
24.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
24.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
24.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
24.2
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
24.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
24.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
24.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
24.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
24.0
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
23.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
23.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
23.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
23.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
23.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
23.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
23.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
23.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
23.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
23.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
23.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
23.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
23.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
23.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
23.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
23.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
23.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
23.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
23.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
23.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
23.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
23.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
23.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
23.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
23.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
22.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.9
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
22.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
22.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
22.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
22.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
22.8
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
22.8
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
22.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
22.7
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
22.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
22.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
22.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
22.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
22.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
22.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
22.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
22.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
22.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
22.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
22.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
22.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
22.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
22.0
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
22.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
22.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
21.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
21.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
21.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
21.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
21.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
21.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
21.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.6
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
21.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
21.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
21.5
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
21.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
21.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
21.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
21.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
21.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
21.1
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
21.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
21.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
21.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
21.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.9
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
20.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
20.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
20.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
20.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
20.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
20.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
20.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
20.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
20.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
20.6
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
20.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
20.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
20.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
20.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
20.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
20.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
20.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
20.3
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
20.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
20.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
19.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
19.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
19.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
19.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
19.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
19.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
19.4
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
19.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
19.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
19.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
19.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
19.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
19.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
19.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
19.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
19.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
19.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
18.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
18.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
18.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
18.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
18.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
18.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
18.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
17.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.6
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
17.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.5
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
17.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
17.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
17.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
17.2
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
17.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
17.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
17.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
17.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
17.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
17.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
16.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
16.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
16.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
16.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
16.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
16.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
16.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.9
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
15.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
15.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
15.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
15.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
15.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
15.5
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
15.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
15.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
15.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
15.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
15.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
14.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
14.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
14.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
14.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
14.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
13.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
13.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
13.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
13.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
13.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
13.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
12.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
12.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
12.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
12.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
12.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
11.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
9.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
9.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC30A5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
75.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
68.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
61.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
54.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
54.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
53.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
52.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
52.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
52.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
52.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
50.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
50.5
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
50.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
47.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
47.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
47.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
47.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
46.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
46.5
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
45.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
44.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
44.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
43.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
43.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
43.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
42.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
42.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
42.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
41.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
41.6
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
40.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
40.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
39.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
39.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
39.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
39.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
38.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
38.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
38.1
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
38.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
37.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
37.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
37.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
37.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
35.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
35.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
35.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
34.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
34.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
34.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
33.9
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
33.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
33.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
33.3
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
33.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
33.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
33.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
33.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
32.8
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
32.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
32.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
31.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
31.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
31.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
31.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
31.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
31.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
31.1
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
31.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
30.9
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
30.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
30.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
29.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
29.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
29.8
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
29.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
29.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
29.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
29.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
29.2
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
29.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
28.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
27.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
27.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
27.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
27.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
25.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
25.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
20.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
20.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.8
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
19.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
16.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC30A5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
99.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
98.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
67.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
56.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
55.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
52.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
47.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
45.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
44.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
42.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
41.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
40.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
39.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
39.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
37.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
36.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
36.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
36.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
35.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
34.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
34.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
33.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
33.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
33.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
33.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
33.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
33.1
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
32.8
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
32.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
32.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
32.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
32.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
32.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
32.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
32.0
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
31.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
31.7
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
31.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
31.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
31.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
30.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
30.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
30.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
29.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
29.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
29.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
29.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
29.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
28.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
28.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
28.1
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
28.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
27.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
27.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
27.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
27.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
27.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
27.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
27.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
27.4
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
27.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
27.1
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
26.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
26.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
26.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
26.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
26.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
26.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
26.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
26.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
26.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
26.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
26.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
26.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
25.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
25.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
25.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
25.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
25.1
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
25.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
24.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
24.8
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
24.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
24.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
24.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
24.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
24.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
24.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
24.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
23.9
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
23.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
23.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
23.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
23.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
23.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
23.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
23.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.2
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
23.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
22.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
22.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
22.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
22.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
22.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
22.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
22.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
22.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
22.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
22.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
22.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
22.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
22.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
22.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
21.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
21.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
21.4
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
21.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
21.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
21.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
21.2
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
21.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
21.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
21.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
20.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
20.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
20.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
20.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
20.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
20.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
20.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
20.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
20.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
20.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
20.1
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
20.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
20.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
20.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
20.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
20.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
20.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
20.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
19.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
19.8
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
19.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
19.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
19.6
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
19.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
19.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
19.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
19.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
19.3
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
19.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
18.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
18.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
18.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
18.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
18.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
18.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
18.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
18.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
18.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
18.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
18.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
18.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
18.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
18.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
18.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
18.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
18.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
17.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
17.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
17.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
17.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
17.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
17.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
17.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
17.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
17.1
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
17.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
17.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
17.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
17.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.9
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.8
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
16.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
16.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
16.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
16.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
16.3
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
16.1
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
16.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
16.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
15.9
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
15.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
15.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
15.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
15.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
15.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
15.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
15.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.3
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
15.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
15.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
14.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
14.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
14.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
14.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
14.4
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
14.2
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
14.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
13.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.9
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
13.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
13.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
13.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
13.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
12.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
12.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
12.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
11.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.2
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
10.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
10.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
9.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
9.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
9.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
8.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
8.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.5
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
8.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
8.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
8.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
8.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
7.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
5.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
4.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
2.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
1.8
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0025050003
Tumor
1.3
CPT0001180009
Tumor
1.1
CPT0086820003
Tumor
0.9
CPT0002270011
Tumor
0.8
CPT0012180003
Tumor
0.7
CPT0002350011
Tumor
0.7
CPT0015730003
Tumor
0.7
CPT0078660003
Tumor
0.7
CPT0023350003
Tumor
0.6
CPT0075130003
Tumor
0.6
CPT0086950003
Tumor
0.6
CPT0081880003
Tumor
0.5
CPT0012280003
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0025110003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0065430003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0079270003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0020120003
Tumor
0.4
CPT0078800003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0012550003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0000790001
Normal
0.3
CPT0088690003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0078670001
Normal
0.3
CPT0025880003
Tumor
0.2
CPT0012640003
Normal
0.2
CPT0012670003
Tumor
0.2
CPT0092800003
Normal
0.2
CPT0078940001
Normal
0.2
CPT0075560003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0088500001
Normal
0.2
CPT0020130001
Normal
0.2
CPT0088640003
Normal
0.2
CPT0086870003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0001350001
Normal
0.2
CPT0026420001
Normal
0.2
CPT0066430001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0063330001
Normal
0.1
CPT0079430001
Normal
0.1
CPT0092290003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0011410003
Tumor
0.1
CPT0006730001
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0001190001
Normal
0.1
CPT0065820001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0064400001
Normal
0.1
CPT0024670003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0012290003
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0064370003
Tumor
0.1
CPT0086370003
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0009060003
Tumor
0.1
CPT0086970003
Normal
0.1
CPT0023690003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0012090003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0078510003
Tumor
0.0
CPT0000870016
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0077110003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0088710001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0001550001
Normal
0.0
CPT0065810003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0089040001
Normal
0.0
CPT0009000003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0001220008
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0076330003
Tumor
0.0
CPT0088630003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0082010001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0001540009
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0078990003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0025610001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0092730003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0088760003
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0006530001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0065750003
Tumor
-0.1
CPT0025350003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0007870001
Normal
-0.2
CPT0063640001
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0006440003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0066520001
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0026410003
Tumor
-0.2
CPT0018250001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0006630003
Tumor
-0.2
CPT0079380003
Tumor
-0.2
CPT0012080003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0012570003
Normal
-0.3
CPT0075170001
Normal
-0.3
CPT0020020001
Normal
-0.3
CPT0065870003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0015910003
Tumor
-0.3
CPT0010160003
Tumor
-0.3
CPT0012370003
Tumor
-0.3
CPT0063320003
Tumor
-0.3
CPT0013790003
Normal
-0.3
CPT0084560003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0084590001
Normal
-0.4
CPT0010120001
Normal
-0.4
CPT0092310003
Normal
-0.4
CPT0017850003
Tumor
-0.4
CPT0079300001
Normal
-0.4
CPT0007860003
Tumor
-0.4
CPT0088550004
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0077320001
Normal
-0.4
CPT0012900004
Tumor
-0.4
CPT0025060001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0088920001
Normal
-0.4
CPT0088570001
Normal
-0.5
CPT0021240003
Tumor
-0.5
CPT0087040003
Tumor
-0.5
CPT0081990003
Tumor
-0.5
CPT0079180003
Tumor
-0.5
CPT0009080003
Normal
-0.5
CPT0012920003
Normal
-0.6
CPT0065930003
Tumor
-0.6
CPT0066480003
Tumor
-0.6
CPT0006900003
Tumor
-0.6
CPT0077490003
Tumor
-0.6
CPT0009020003
Normal
-0.6
CPT0088900003
Tumor
-0.6
CPT0077310003
Tumor
-0.6
CPT0024680001
Normal
-0.6
CPT0014470001
Normal
-0.7
CPT0011240003
Tumor
-1.2
CPT0017410003
Tumor
-2.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
