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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
203.9
nTPM
FANTOM5:
160.3
Scaled Tags Per Million
Pig:
123.1
nTPM
Allen mouse:
2.2
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
203.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 109.4
2188
Female, age 91, both hemispheres
152.7
2301
Female, age 85, both hemispheres
114.7
2090
Male, age 80, both hemispheres
90.9
1984
Male, age 76, both hemispheres
79.2
Dorsal cochlear nucleus nTPM: 83.4
2187
Female, age 91, both hemispheres
96.7
2378
Male, age 80, both hemispheres
86.1
2802
Male, age 74, right hemisphere
85.2
2370
Male, age 61, both hemispheres
75.2
2058
Male, age 76, both hemispheres
74.0
Dorsal tegmental nucleus nTPM: 74.9
2326
Male, age 74, both hemispheres
84.7
2083
Male, age 80, both hemispheres
84.4
2358
Male, age 61, both hemispheres
66.6
1936
Male, age 76, left hemisphere
64.1
Dorsolateral tegmental area nTPM: 82.4
2141
Male, age 76, both hemispheres
109.8
2751
Female, age 85, both hemispheres
83.7
2360
Male, age 74, both hemispheres
77.4
2654
Male, age 80, both hemispheres
72.5
2337
Male, age 61, both hemispheres
68.8
Kolliker-Fuse nucleus nTPM: 112.7
2793
Female, age 91, left hemisphere
173.3
2315
Male, age 76, right hemisphere
103.6
2163
Male, age 80, both hemispheres
61.3
Lateral lemniscal nuclei nTPM: 156.6
2169
Male, age 76, both hemispheres
222.2
2453
Male, age 74, right hemisphere
161.3
2746
Female, age 85, left hemisphere
142.0
2320
Female, age 91, left hemisphere
135.1
2036
Male, age 80, both hemispheres
122.6
Lateral parabrachial nucleus nTPM: 117.3
2139
Female, age 85, right hemisphere
159.1
2013
Male, age 80, both hemispheres
111.8
2792
Male, age 76, both hemispheres
110.0
2790
Male, age 61, both hemispheres
88.4
Lateral vestibular nucleus nTPM: 69.6
2311
Male, age 80, both hemispheres
76.3
2184
Male, age 76, both hemispheres
62.9
Locus coeruleus nTPM: 128.2
2720
Male, age 74, both hemispheres
168.5
2014
Male, age 55, unknown
150.0
2123
Female, age 91, both hemispheres
135.0
1980
Male, age 76, both hemispheres
133.5
2788
Male, age 74, unknown
118.8
2317
Female, age 72, unknown
96.2
2162
Male, age 80, both hemispheres
95.3
Medial parabrachial nucleus nTPM: 88.6
2854
Male, age 80, both hemispheres
133.6
2170
Female, age 91, both hemispheres
95.7
2463
Female, age 85, right hemisphere
76.3
2786
Male, age 76, both hemispheres
72.2
2156
Male, age 61, both hemispheres
65.4
Medial periolivary nuclei nTPM: 160.0
2063
Male, age 76, both hemispheres
226.1
2171
Female, age 85, both hemispheres
185.8
2458
Female, age 91, both hemispheres
148.0
2791
Male, age 74, right hemisphere
126.3
2081
Male, age 80, both hemispheres
113.6
Motor facial nucleus nTPM: 173.2
2327
Male, age 80, both hemispheres
226.0
2062
Male, age 76, both hemispheres
222.3
2697
Female, age 85, both hemispheres
193.0
2365
Male, age 74, right hemisphere
177.9
2795
Female, age 91, both hemispheres
118.2
2126
Male, age 61, both hemispheres
102.0
Motor trigeminal nucleus nTPM: 112.8
2079
Male, age 80, both hemispheres
181.6
2560
Male, age 74, both hemispheres
126.6
2321
Female, age 91, both hemispheres
117.3
2335
Male, age 61, both hemispheres
76.0
2309
Male, age 76, both hemispheres
62.3
Nuclei of the trapezoid body nTPM: 188.0
2159
Male, age 61, both hemispheres
225.0
1983
Male, age 76, both hemispheres
224.2
2166
Male, age 80, both hemispheres
177.7
2735
Female, age 85, both hemispheres
175.2
2368
Female, age 91, both hemispheres
137.9
Nucleus raphe magnus nTPM: 203.9
2160
Male, age 61, both hemispheres
294.4
2172
Female, age 85, both hemispheres
239.9
2328
Male, age 80, both hemispheres
211.3
2455
Male, age 74, both hemispheres
190.5
2051
Male, age 76, both hemispheres
147.6
2459
Female, age 91, both hemispheres
140.0
Paramedian reticular nucleus nTPM: 116.6
2050
Female, age 85, both hemispheres
145.0
2313
Male, age 61, both hemispheres
117.8
2057
Male, age 80, both hemispheres
102.3
2052
Male, age 76, both hemispheres
101.2
Pedunculopontine tegmental nucleus nTPM: 83.6
2334
Male, age 80, both hemispheres
96.1
2338
Male, age 61, both hemispheres
96.1
1921
Female, age 85, both hemispheres
58.5
Pontine nuclei nTPM: 171.7
1863
Male, age 55, unknown
234.0
2727
Male, age 61, right hemisphere
222.7
2787
Female, age 85, both hemispheres
208.8
1968
Male, age 76, left hemisphere
179.0
2109
Female, age 72, unknown
154.8
2454
Male, age 74, left hemisphere
129.2
2115
Male, age 80, left hemisphere
128.3
2319
Female, age 91, both hemispheres
116.7
Pontine raphe nucleus nTPM: 109.8
2122
Female, age 85, midline
147.6
2853
Male, age 76, midline
72.1
Posteroventral cochlear nucleus nTPM: 90.9
2135
Female, age 91, both hemispheres
111.4
2070
Male, age 76, both hemispheres
102.1
2341
Male, age 80, both hemispheres
89.1
2752
Female, age 85, both hemispheres
81.6
2371
Male, age 61, both hemispheres
70.3
Principal sensory trigeminal nucleus nTPM: 161.8
2158
Male, age 61, both hemispheres
256.7
2367
Female, age 91, left hemisphere
168.0
2008
Male, age 80, left hemisphere
166.4
2324
Male, age 76, both hemispheres
56.3
Reticular pontine nucleus, caudal nTPM: 164.0
2332
Male, age 80, right hemisphere
197.8
2092
Male, age 76, both hemispheres
191.3
2457
Female, age 91, both hemispheres
154.4
2559
Male, age 74, both hemispheres
112.4
Reticular pontine nucleus, oral nTPM: 123.9
2361
Male, age 74, both hemispheres
187.3
2366
Female, age 91, both hemispheres
145.2
2012
Female, age 85, both hemispheres
135.7
1939
Male, age 80, both hemispheres
81.3
2167
Male, age 76, both hemispheres
69.8
Reticulotegmental nucleus nTPM: 115.4
2325
Male, age 76, both hemispheres
138.8
2452
Male, age 74, both hemispheres
111.3
2333
Male, age 80, both hemispheres
109.5
2322
Female, age 91, both hemispheres
102.1
Spinal trigeminal nucleus, oral nTPM: 73.0
2164
Male, age 80, both hemispheres
81.7
1978
Male, age 76, both hemispheres
74.2
2737
Female, age 85, both hemispheres
63.2
Subcoeruleus area nTPM: 105.1
2089
Male, age 76, left hemisphere
151.1
1958
Male, age 80, both hemispheres
129.8
2323
Female, age 91, left hemisphere
88.8
2369
Female, age 85, left hemisphere
79.7
2451
Male, age 74, both hemispheres
75.9
Superior olive nTPM: 172.7
1875
Female, age 85, both hemispheres
201.9
2020
Male, age 76, both hemispheres
182.3
2329
Male, age 80, right hemisphere
162.3
2561
Female, age 91, both hemispheres
159.6
2364
Male, age 74, right hemisphere
157.3
Ventral periolivary nuclei nTPM: 181.6
2165
Male, age 80, both hemispheres
218.3
2130
Female, age 85, both hemispheres
197.4
2023
Male, age 76, both hemispheres
172.8
2794
Female, age 91, left hemisphere
137.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 142.4
1959
Male, age 76, both hemispheres
190.4
2449
Male, age 74, both hemispheres
177.4
2161
Male, age 80, both hemispheres
160.6
2840
Female, age 85, both hemispheres
117.5
2456
Female, age 91, both hemispheres
114.7
2359
Male, age 61, both hemispheres
94.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
123.1
Pig sample
Sample description
nTPM
Pons nTPM: 123.2
Samples: 4
Max nTPM: 200.9
Min nTPM: 79.9
Sample A
Female
200.9
Sample B
Female
83.0
Sample C
Male
79.9
Sample D
Male
128.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.