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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
159.1
nTPM
HPA Brain:
154.7
nTPM
GTEx:
159.1
nTPM
FANTOM5:
218.8
Scaled Tags Per Million
Pig:
240.5
nTPM
Mouse:
582.7
nTPM
Allen mouse:
13.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
154.7
Sample id
Sample description
nTPM
Amygdala nTPM: 78.7
1987
Female, age 91, left hemisphere
106.7
2517
Female, age 94, left hemisphere
97.7
2514
Male, age 75, right hemisphere
79.4
2695
Female, age 67, right hemisphere
68.5
2814
Male, age 76, right hemisphere
41.0
Basal amygdala nTPM: 130.3
2243
Female, age 91, right hemisphere
222.3
2827
Female, age 67, right hemisphere
133.9
2685
Female, age 94, left hemisphere
133.3
2110
Male, age 80, left hemisphere
132.1
1955
Male, age 76, both hemispheres
93.1
2609
Male, age 75, right hemisphere
67.1
Central amygdala nTPM: 99.0
2239
Male, age 80, left hemisphere
178.0
2826
Female, age 94, left hemisphere
124.6
2701
Female, age 91, right hemisphere
100.2
2515
Male, age 75, right hemisphere
56.5
1905
Male, age 76, both hemispheres
35.6
Corticomedial amygdala nTPM: 154.7
2242
Female, age 91, right hemisphere
232.4
2829
Male, age 80, left hemisphere
191.0
2535
Female, age 67, right hemisphere
184.6
2429
Female, age 94, left hemisphere
156.1
2240
Male, age 76, both hemispheres
104.4
2428
Male, age 75, right hemisphere
59.9
Lateral amygdala nTPM: 102.6
2534
Female, age 94, left hemisphere
130.9
2256
Male, age 80, left hemisphere
109.8
2830
Female, age 67, right hemisphere
108.6
1883
Male, age 76, both hemispheres
98.6
2255
Female, age 91, right hemisphere
92.2
2516
Male, age 75, right hemisphere
75.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
159.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 159.1
Samples: 152
Max nTPM: 491.4
Min nTPM: 24.4
Std nTPM: 92.1
Median nTPM: 124.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
491.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
459.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
410.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
399.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
399.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
376.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
375.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
354.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
347.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
329.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
314.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
307.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
304.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
292.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
287.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
284.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
284.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
279.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
274.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
272.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
259.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
257.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
256.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
255.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
253.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
241.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
240.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
239.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
237.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
230.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
229.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
227.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
227.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
226.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
226.1
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
224.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
222.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
221.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
208.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
207.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
202.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
197.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
197.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
196.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
194.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
182.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
180.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
178.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
178.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
175.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
174.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
174.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
171.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
165.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
164.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
163.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
163.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
161.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
159.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
158.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
158.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
158.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
156.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
156.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
155.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
153.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
147.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
146.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
145.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
143.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
137.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
133.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
129.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
128.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
128.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
125.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
124.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
124.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
124.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
122.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
122.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
117.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
117.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
116.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
115.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
115.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
114.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
114.7
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
113.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
113.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
113.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
111.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
111.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
110.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
109.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
109.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
109.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
109.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
108.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
107.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
106.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
104.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
104.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
103.4
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
103.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
101.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
99.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
97.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
96.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
95.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
93.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
92.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
91.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
87.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
87.6
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
86.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
85.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
85.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
82.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
81.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
81.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
81.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
81.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
79.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
78.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
78.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
78.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
78.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
78.1
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
77.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
77.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
76.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
76.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
72.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
72.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
71.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
71.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
68.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
68.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
64.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
62.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
61.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
61.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
60.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
60.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
58.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
56.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
56.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
51.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
47.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
45.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
24.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
582.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 582.7
Samples: 4
Max nTPM: 639.5
Min nTPM: 522.2
Sample A
Male
576.8
Sample B
Male
639.5
Sample C
Female
522.2
Sample D
Female
592.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.