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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SUMF1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
105.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
102.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
98.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
80.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
78.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
77.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
76.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
75.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
74.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
72.2
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
67.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
67.8
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
67.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
67.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
65.3
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
64.2
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
63.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
62.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
61.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
61.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
61.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
60.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
55.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
55.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
55.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
54.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
53.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
53.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
52.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
51.6
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
51.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
49.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
47.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
47.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
46.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
44.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
44.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
43.8
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
39.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
39.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
39.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
38.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
38.3
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
37.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
37.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
37.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
36.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
35.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
35.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
34.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
30.8
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
29.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
29.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
28.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
26.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
25.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
24.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
23.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
22.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
21.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
20.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
19.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
16.5
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SUMF1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
84.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
80.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
79.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
73.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
70.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
68.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
67.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
66.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
66.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
65.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
61.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
59.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
59.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
59.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
58.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
58.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
58.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
57.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
56.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
54.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
54.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
54.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
53.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
51.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
51.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
49.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
49.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
48.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
48.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
46.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
46.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
46.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
44.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
44.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
43.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
43.8
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
42.7
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
42.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
40.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
39.8
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
39.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
38.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
38.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
38.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
37.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
37.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
37.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
36.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
36.6
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
36.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
36.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
36.0
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
36.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
35.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
35.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
35.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
35.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
35.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
35.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
35.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
34.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
34.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
34.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
34.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
33.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
33.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
33.5
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
33.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
33.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
33.1
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
33.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
32.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
32.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
32.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
32.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
32.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
32.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
32.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
32.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
32.0
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
32.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
31.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
31.7
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
31.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
31.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
31.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
31.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
31.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
31.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
31.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
30.8
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
30.7
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
30.7
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
30.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
30.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
30.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
30.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
30.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
30.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
29.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
29.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
29.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
29.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
29.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
29.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
29.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
29.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
29.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
28.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
28.9
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
28.6
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
28.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
28.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
28.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
28.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
28.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
28.1
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
28.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
28.0
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
27.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
27.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
27.8
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
27.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
27.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
27.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
27.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
27.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
27.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
27.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
27.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
27.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
27.3
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
27.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
27.0
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
27.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
26.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
26.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
26.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
26.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
26.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
26.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
26.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
26.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
26.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
26.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
26.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
26.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
26.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
26.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
26.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
26.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
26.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
26.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
26.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
25.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
25.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
25.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
25.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
25.7
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
25.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
25.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
25.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
25.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
25.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
25.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
25.4
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
25.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
25.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
25.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
25.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
25.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
25.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
25.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
25.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
25.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
25.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
25.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
25.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
24.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
24.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
24.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
24.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
24.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
24.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
24.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
24.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
24.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
24.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
24.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
24.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
24.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
24.3
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
24.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
24.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
24.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
24.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
24.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
24.0
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
24.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
24.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
24.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
23.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
23.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
23.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
23.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
23.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
23.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
23.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
23.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
23.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
23.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
23.4
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
23.3
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
23.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
23.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
23.1
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
23.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
23.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
23.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
23.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
23.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
22.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
22.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
22.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
22.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
22.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
22.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
22.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
22.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
22.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
22.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
22.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
22.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
22.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
22.4
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
22.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
22.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
22.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
22.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
22.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
21.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
21.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.9
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
21.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
21.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
21.8
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
21.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
21.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
21.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
21.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
21.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
21.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
21.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
21.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.5
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
21.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
21.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
21.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
21.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
21.3
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
21.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
21.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
21.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
21.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
21.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
21.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
21.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
21.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
21.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
21.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
20.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
20.9
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
20.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
20.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
20.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
20.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
20.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
20.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
20.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
20.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
20.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
20.6
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
20.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
20.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
20.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
20.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
20.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
20.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
20.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
20.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
20.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
20.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
20.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
20.2
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
20.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
20.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
20.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
20.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
20.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.0
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
19.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
19.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
19.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
19.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
19.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
19.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.5
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
19.5
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
19.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
19.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
19.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
19.3
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
19.3
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
19.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
19.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
19.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
19.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
19.1
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
19.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
19.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
19.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
19.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
19.0
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
18.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
18.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
18.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
18.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.7
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
18.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
18.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
18.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
18.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
18.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.5
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
18.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
18.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
18.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
18.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
18.3
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
18.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
18.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
18.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
18.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
18.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
18.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
17.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
17.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
17.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
17.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
17.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
17.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
17.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
17.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
17.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
16.9
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
16.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
16.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
16.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
16.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
16.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
16.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
16.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
16.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
16.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
16.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
16.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
16.0
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
16.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
16.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
15.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
15.7
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
15.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
15.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
15.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
15.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
15.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
15.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
15.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
15.2
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
15.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
15.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
15.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
15.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
15.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
15.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
15.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
15.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
14.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
14.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
14.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
14.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
14.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
14.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
14.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
14.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
14.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
14.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
14.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
13.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
13.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
13.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
13.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.8
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
13.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
13.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
13.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
13.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
13.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
13.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
13.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
13.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.1
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
13.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
13.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
13.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
13.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
12.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
12.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
12.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
12.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
12.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
12.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
12.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
12.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
11.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
11.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
11.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
11.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
11.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
10.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
10.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
10.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
10.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
10.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.4
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
10.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
9.8
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
9.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
9.4
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
9.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
9.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
7.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
6.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SUMF1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
73.9
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
65.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
56.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
51.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
51.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
50.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
49.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
43.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
43.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
40.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
40.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
40.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
40.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
39.9
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
38.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
38.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
37.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
36.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
33.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
31.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
31.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
31.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
30.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
29.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
29.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
29.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
28.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
28.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
27.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
27.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
26.7
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
25.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
25.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
25.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
25.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
25.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
24.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
24.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
24.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
24.4
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
24.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
24.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.1
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
24.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
23.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
23.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
23.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
22.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
22.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
22.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
21.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
21.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
21.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
21.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
21.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
21.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
20.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
20.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
20.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
20.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
20.0
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
20.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
19.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
19.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
19.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
19.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
19.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
18.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
18.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
17.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
16.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
16.6
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
16.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
16.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
15.9
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
15.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
15.5
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
15.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
15.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
15.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
14.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
13.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
13.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
13.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
13.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
13.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
12.7
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SUMF1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
49.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
140.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
125.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
112.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
103.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
97.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
96.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
95.7
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
94.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
93.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
91.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
90.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
89.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
89.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
87.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
86.1
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
86.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
85.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
84.7
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
83.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
82.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
81.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
80.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
79.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
79.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
77.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
76.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
76.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
76.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
75.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
75.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
75.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
74.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
74.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
73.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
73.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
73.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
72.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
72.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
71.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
71.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
70.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
70.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
70.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
70.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
70.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
70.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
70.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
69.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
69.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
69.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
68.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
68.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
68.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
68.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
68.2
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
68.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
67.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
67.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
67.4
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
66.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
66.4
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
65.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
65.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
64.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
64.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
63.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
63.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
63.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
63.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
63.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
63.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
63.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
63.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
63.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
63.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
62.8
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
62.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
62.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
62.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
62.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
62.2
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
61.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
61.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
61.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
61.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
61.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
60.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
60.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
60.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
60.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
60.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
59.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
59.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
59.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
58.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
56.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
56.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
56.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
55.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
54.9
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
54.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
54.7
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
54.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
54.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
54.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
54.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
54.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
54.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
53.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
53.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
52.7
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
52.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
52.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
52.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
52.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
52.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
51.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
51.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
51.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
50.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
50.8
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
50.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
50.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
50.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
50.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
50.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
49.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
49.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
49.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
49.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
49.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
48.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
48.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
48.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
48.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
48.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
48.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
47.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
47.9
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
47.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
47.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
47.8
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
47.3
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
47.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
47.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
46.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
46.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
46.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
46.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
46.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
45.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
45.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
45.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
45.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
45.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
45.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
44.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
44.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
43.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
43.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
42.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
42.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
42.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
42.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
42.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
42.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
42.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
41.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
41.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
41.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
41.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
41.5
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
41.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
41.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
41.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
40.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
40.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
39.9
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
39.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
39.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
39.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
39.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
38.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
38.7
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
38.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
38.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
38.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
38.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
38.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
38.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
38.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
38.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
37.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
37.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
37.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
37.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
37.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
36.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
36.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
36.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
35.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
35.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
35.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
35.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
35.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
35.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
35.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
34.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
34.5
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
34.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
34.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
34.2
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
34.1
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
33.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
33.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
33.1
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
32.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
32.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
32.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
32.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
32.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
32.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
32.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
32.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
32.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
31.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
31.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
31.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
30.8
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
30.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
30.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
30.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
30.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
30.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
30.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
30.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
30.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
29.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
29.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
28.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
28.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
28.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
28.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
28.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
27.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
26.8
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
26.2
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
25.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
25.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
24.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
24.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
24.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
23.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
23.8
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
23.6
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
23.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
22.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
22.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
22.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
22.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
21.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
21.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
20.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
20.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
19.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
18.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
18.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
18.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
18.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
17.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
17.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
15.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
14.5
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
12.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
11.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
9.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0088550004
Tumor
1.2
CPT0086950003
Tumor
1.1
CPT0011410003
Tumor
1.1
CPT0078800003
Tumor
1.0
CPT0078510003
Tumor
0.7
CPT0002270011
Tumor
0.7
CPT0065930003
Tumor
0.6
CPT0001270001
Normal
0.6
CPT0007870001
Normal
0.6
CPT0001340003
Tumor
0.5
CPT0076330003
Tumor
0.5
CPT0025060001
Normal
0.5
CPT0088970003
Tumor
0.5
CPT0010170001
Normal
0.5
CPT0023350003
Tumor
0.4
CPT0088920001
Normal
0.4
CPT0000890001
Normal
0.4
CPT0001350001
Normal
0.4
CPT0014350001
Normal
0.4
CPT0064370003
Tumor
0.4
CPT0001190001
Normal
0.4
CPT0078530001
Normal
0.4
CPT0000790001
Normal
0.4
CPT0084590001
Normal
0.4
CPT0065450001
Normal
0.3
CPT0077140001
Normal
0.3
CPT0086970003
Normal
0.3
CPT0077320001
Normal
0.3
CPT0086830003
Normal
0.3
CPT0014130001
Normal
0.3
CPT0075560003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0089480003
Normal
0.3
CPT0077310003
Tumor
0.3
CPT0069010001
Normal
0.3
CPT0088710001
Normal
0.3
CPT0023690003
Tumor
0.2
CPT0014160003
Tumor
0.2
CPT0066520001
Normal
0.2
CPT0078940001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0092310003
Normal
0.2
CPT0064400001
Normal
0.2
CPT0012570003
Normal
0.2
CPT0063320003
Tumor
0.2
CPT0092800003
Normal
0.2
CPT0089040001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0000660001
Normal
0.2
CPT0076350001
Normal
0.2
CPT0001260009
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0025610001
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0066430001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0017850003
Tumor
0.2
CPT0081880003
Tumor
0.2
CPT0078840001
Normal
0.2
CPT0002350011
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0013790003
Normal
0.2
CPT0088570001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0088500001
Normal
0.2
CPT0087040003
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0092190003
Normal
0.2
CPT0007470001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0001510001
Normal
0.1
CPT0077110003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0020130001
Normal
0.1
CPT0023360001
Normal
0.1
CPT0012550003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0089460004
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0006730001
Normal
0.1
CPT0025170003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0088780001
Normal
0.1
CPT0019160001
Normal
0.1
CPT0006900003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0014470001
Normal
0.1
CPT0025110003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0081620001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0081990003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0063630003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0088640003
Normal
0.0
CPT0075170001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0025580004
Tumor
0.0
CPT0063640001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0089020003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0018250001
Normal
0.0
CPT0092730003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0007320003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0019130003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0001550001
Normal
0.0
CPT0009080003
Normal
0.0
CPT0012090003
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0085670003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0086890003
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0088690003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0079430001
Normal
-0.1
CPT0001500009
Tumor
-0.1
CPT0012900004
Tumor
-0.1
CPT0001540009
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0025050003
Tumor
-0.1
CPT0001230001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0025290003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0021240003
Tumor
-0.1
CPT0088630003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0009020003
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0079510001
Normal
-0.2
CPT0088480003
Tumor
-0.2
CPT0012920003
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0065690003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0075130003
Tumor
-0.3
CPT0075720003
Tumor
-0.3
CPT0069160003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0012080003
Tumor
-0.3
CPT0088760003
Tumor
-0.3
CPT0069000003
Tumor
-0.3
CPT0014450004
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0024670003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0065870003
Tumor
-0.3
CPT0025880003
Tumor
-0.3
CPT0009000003
Tumor
-0.3
CPT0010110003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0065810003
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0025350003
Tumor
-0.4
CPT0014370004
Tumor
-0.4
CPT0001180009
Tumor
-0.4
CPT0006440003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0077490003
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0081600003
Tumor
-0.4
CPT0000870016
Tumor
-0.5
CPT0001220008
Tumor
-0.5
CPT0079230003
Tumor
-0.5
CPT0086870003
Tumor
-0.5
CPT0006630003
Tumor
-0.5
CPT0000780007
Tumor
-0.5
CPT0078990003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
