HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:52.0 nTPM
HPA Brain:51.4 nTPM
GTEx:52.0 nTPM
FANTOM5:88.4 Scaled Tags Per Million
Pig:51.5 nTPM
Mouse:41.6 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008455Antibody HPA031125Antibody CAB002781Antibody CAB068195
Glial cells Not detectedMedium-Not detected
Neuronal cells Not detectedMediumNot detectedNot detected









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 51.4
Sample id Sample description nTPM
Hippocampus
nTPM: 51.4
2529 Female, age 94, left hemisphere 68.0
1855 Male, age 76, left hemisphere 51.1
2148 Female, age 91, left hemisphere 50.9
1898 Male, age 80, left hemisphere 50.4
2621 Female, age 67, right hemisphere 46.4
1911 Female, age 85, right hemisphere 41.8
Dentate gyrus
nTPM: 46.0
2530 Female, age 94, left hemisphere 56.5
2010 Male, age 76, both hemispheres 52.9
2528 Male, age 74, both hemispheres 45.5
2531 Female, age 67, both hemispheres 42.4
2246 Female, age 85, both hemispheres 42.0
1927 Female, age 91, both hemispheres 36.8
Entorhinal gyrus
nTPM: 47.0
2117 Female, age 91, right hemisphere 64.1
2686 Male, age 75, right hemisphere 52.9
1787 Male, age 76, left hemisphere 52.7
2764 Male, age 80, right hemisphere 42.1
1938 Female, age 85, left hemisphere 41.8
2613 Female, age 94, left hemisphere 28.2
Hippocampus, CA1
nTPM: 49.0
2045 Male, age 76, both hemispheres 64.3
2527 Male, age 74, both hemispheres 53.3
2082 Female, age 91, right hemisphere 45.1
1873 Female, age 85, both hemispheres 42.6
2749 Male, age 80, left hemisphere 39.8
Hippocampus, CA2
nTPM: 49.9
2249 Male, age 74, both hemispheres 56.0
1892 Male, age 76, both hemispheres 52.6
2113 Female, age 91, right hemisphere 52.3
2437 Female, age 94, left hemisphere 48.0
1940 Female, age 85, left hemisphere 47.2
1963 Male, age 80, left hemisphere 43.3
Hippocampus, CA3
nTPM: 50.0
1867 Male, age 76, both hemispheres 76.5
2861 Female, age 67, both hemispheres 53.0
2436 Male, age 74, both hemispheres 52.6
1891 Female, age 85, both hemispheres 42.5
2620 Female, age 94, left hemisphere 41.6
2137 Male, age 80, left hemisphere 33.6
Parahippocampal cortex
nTPM: 44.7
2250 Female, age 67, right hemisphere 60.6
2018 Male, age 76, both hemispheres 60.4
2692 Male, age 74, both hemispheres 46.1
2245 Female, age 91, both hemispheres 45.8
1990 Female, age 91, right hemisphere 45.6
2622 Female, age 67, right hemisphere 42.9
1933 Female, age 85, both hemispheres 42.7
2532 Female, age 72, left hemisphere 38.3
1850 Male, age 80, both hemispheres 35.3
2693 Female, age 94, both hemispheres 29.3
Perirhinal gyrus
nTPM: 39.3
1847 Female, age 91, left hemisphere 43.9
1794 Male, age 80, right hemisphere 40.8
2521 Female, age 94, right hemisphere 37.8
1841 Female, age 85, right hemisphere 37.3
2848 Male, age 76, right hemisphere 36.7
Subiculum
nTPM: 49.1
2042 Male, age 76, both hemispheres 69.6
2619 Male, age 74, both hemispheres 49.6
1977 Female, age 85, both hemispheres 46.7
2729 Female, age 91, right hemisphere 46.3
1901 Male, age 80, both hemispheres 44.0
2438 Female, age 94, left hemisphere 38.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 52.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.0
Samples: 197

Max nTPM: 207.6
Min nTPM: 17.3
Std nTPM: 29.2
Median nTPM: 44.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 207.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 181.7
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 166.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 140.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 132.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 117.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 116.8
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 112.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 107.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 106.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 102.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 88.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.4
FF:10153-102I9 76 years, female 102.0
FF:10169-103B7 60 years, female 74.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 51.5
Pig sample Sample description nTPM
Subiculum
nTPM: 49.6
Samples: 4

Max nTPM: 51.2
Min nTPM: 47.0
Sample A Female 51.2
Sample B Female 47.0
Sample C Male 49.6
Sample D Male 50.5
Dorsal hippocampus
nTPM: 46.4
Samples: 4

Max nTPM: 57.8
Min nTPM: 35.9
Sample A Female 47.1
Sample B Female 44.6
Sample C Male 57.8
Sample D Male 35.9
Entorhinal cortex
nTPM: 51.5
Samples: 4

Max nTPM: 56.2
Min nTPM: 45.9
Sample A Female 49.9
Sample B Female 54.1
Sample C Male 56.2
Sample D Male 45.9
Ventral hippocampus
nTPM: 46.0
Samples: 4

Max nTPM: 54.7
Min nTPM: 38.6
Sample A Female 38.6
Sample B Female 44.2
Sample C Male 54.7
Sample D Male 46.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 41.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.0
Samples: 4

Max nTPM: 45.2
Min nTPM: 35.7
Sample A Male 40.7
Sample B Male 45.2
Sample C Female 35.7
Sample D Female 38.3
Hippocampal formation
nTPM: 41.6
Samples: 4

Max nTPM: 44.1
Min nTPM: 39.8
Sample A Male 44.1
Sample B Male 42.0
Sample C Female 40.4
Sample D Female 39.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
112647104 Antisense, RP_110421_01_A10, Mouse strain C57BL/6J (56 days, male) 2.1
68203510 Antisense, RP_041208_01_E06, Mouse strain C57BL/6J (56 days, male) 1.2

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