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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
56.6
nTPM
HPA Brain:
68.3
nTPM
GTEx:
56.6
nTPM
FANTOM5:
88.8
Scaled Tags Per Million
Pig:
44.8
nTPM
Mouse:
36.9
nTPM
Allen mouse:
1.2
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
68.3
Sample id
Sample description
nTPM
Amygdala nTPM: 68.3
2695
Female, age 67, right hemisphere
89.2
2814
Male, age 76, right hemisphere
73.6
1987
Female, age 91, left hemisphere
67.7
2514
Male, age 75, right hemisphere
59.7
2517
Female, age 94, left hemisphere
51.2
Basal amygdala nTPM: 56.0
2827
Female, age 67, right hemisphere
64.4
2609
Male, age 75, right hemisphere
60.7
1955
Male, age 76, both hemispheres
56.4
2110
Male, age 80, left hemisphere
55.2
2243
Female, age 91, right hemisphere
54.6
2685
Female, age 94, left hemisphere
44.9
Central amygdala nTPM: 66.7
2826
Female, age 94, left hemisphere
81.7
2515
Male, age 75, right hemisphere
70.4
1905
Male, age 76, both hemispheres
69.7
2239
Male, age 80, left hemisphere
56.0
2701
Female, age 91, right hemisphere
55.8
Corticomedial amygdala nTPM: 48.0
2428
Male, age 75, right hemisphere
58.8
2829
Male, age 80, left hemisphere
57.0
2242
Female, age 91, right hemisphere
51.8
2535
Female, age 67, right hemisphere
48.5
2240
Male, age 76, both hemispheres
38.5
2429
Female, age 94, left hemisphere
33.5
Lateral amygdala nTPM: 66.4
2830
Female, age 67, right hemisphere
88.8
2255
Female, age 91, right hemisphere
68.1
2256
Male, age 80, left hemisphere
66.0
2534
Female, age 94, left hemisphere
63.2
1883
Male, age 76, both hemispheres
56.6
2516
Male, age 75, right hemisphere
55.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
56.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 56.6
Samples: 152
Max nTPM: 195.4
Min nTPM: 23.9
Std nTPM: 30.6
Median nTPM: 49.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
195.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
191.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
173.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
163.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
157.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
128.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
123.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
118.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
117.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
101.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
101.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
96.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
87.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
87.5
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
86.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
86.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
85.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
84.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
83.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
82.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
81.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
81.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
80.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
80.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
79.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
79.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
78.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
78.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
73.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
71.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
71.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
70.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
68.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
67.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
66.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
65.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
64.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
63.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
63.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
62.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
61.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
61.3
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
61.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
60.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
60.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
60.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
59.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
59.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
59.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
59.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
58.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
58.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
58.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
57.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
56.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
56.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
56.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
55.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
55.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
55.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
55.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
54.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
53.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
53.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
53.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
53.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
52.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
51.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
51.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
51.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
50.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
50.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
50.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
49.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
49.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
49.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
49.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
48.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
48.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
47.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
47.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
47.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
47.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
47.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
46.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
46.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
45.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
45.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
44.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
44.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
44.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
43.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
43.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
43.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
43.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
42.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
42.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
42.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
41.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
41.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
41.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
41.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
41.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
40.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
40.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
40.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
38.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
38.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
38.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
38.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
38.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
38.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
36.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
36.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
36.0
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
35.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
35.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
35.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
35.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
34.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
33.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
32.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
32.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
32.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
32.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
32.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
32.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
32.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
31.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
31.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
31.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
31.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
31.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
31.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
31.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
30.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
30.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
30.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
29.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
29.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
29.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
28.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
28.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
27.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
27.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
26.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
26.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
25.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
25.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
24.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
23.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
23.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
36.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 36.9
Samples: 4
Max nTPM: 39.2
Min nTPM: 35.4
Sample A
Male
37.3
Sample B
Male
39.2
Sample C
Female
35.4
Sample D
Female
35.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.