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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HDGF is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
280.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
144.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
138.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
128.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
86.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
84.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
82.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
78.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
74.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
72.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
72.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
59.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
56.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
56.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
55.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
55.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
55.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
54.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
53.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
51.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
48.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
45.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
44.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
42.6
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
41.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
39.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
38.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
38.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
37.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
36.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
35.4
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
35.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
34.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
34.5
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
34.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
32.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
32.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
32.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
32.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
30.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
30.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
29.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
28.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
27.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
27.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
27.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
27.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
26.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
26.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
26.6
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
26.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
26.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
25.6
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
25.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
23.0
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
22.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
22.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
22.3
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
22.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
20.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
19.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
18.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.4
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HDGF is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
134.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
395.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
349.3
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
319.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
310.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
291.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
288.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
288.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
282.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
278.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
260.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
255.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
247.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
245.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
237.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
235.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
233.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
228.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
228.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
227.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
224.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
223.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
221.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
220.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
220.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
217.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
215.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
211.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
210.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
209.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
209.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
208.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
208.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
208.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
208.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
204.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
204.1
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
203.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
203.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
203.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
203.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
203.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
200.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
200.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
200.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
199.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
199.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
199.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
197.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
196.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
195.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
195.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
194.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
193.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
193.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
191.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
191.4
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
190.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
189.9
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
188.9
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
187.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
187.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
187.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
187.1
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
187.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
185.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
185.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
184.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
184.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
183.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
182.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
182.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
182.1
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
180.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
179.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
179.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
178.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
178.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
178.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
177.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
177.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
176.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
175.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
175.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
175.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
175.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
174.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
173.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
173.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
172.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
172.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
172.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
172.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
171.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
170.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
170.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
170.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
169.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
169.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
169.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
169.1
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
169.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
168.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
168.5
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
168.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
168.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
168.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
168.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
167.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
166.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
166.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
166.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
165.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
164.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
164.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
164.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
163.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
163.5
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
163.1
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
163.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
162.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
162.8
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
162.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
161.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
161.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
161.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
161.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
160.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
160.7
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
160.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
160.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
160.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
160.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
160.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
160.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
159.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
158.8
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
158.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
158.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
158.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
158.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
157.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
157.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
157.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
157.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
157.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
157.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
157.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
157.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
157.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
156.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
156.5
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
156.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
155.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
154.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
154.8
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
154.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
154.6
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
154.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
154.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
154.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
154.1
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
153.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
152.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
152.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
152.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
152.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
152.0
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
151.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
151.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
151.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
151.5
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
151.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
151.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
150.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
150.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
150.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
150.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
150.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
149.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
149.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
148.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
148.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
148.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
148.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
148.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
148.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
147.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
147.5
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
147.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
147.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
147.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
146.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
146.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
146.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
146.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
146.2
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
146.2
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
145.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
145.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
145.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
145.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
145.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
145.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
144.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
144.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
144.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
144.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
143.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
143.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
142.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
142.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
142.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
142.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
142.0
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
141.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
141.6
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
141.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
141.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
141.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
141.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
140.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
140.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
140.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
140.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
140.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
139.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
139.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
139.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
138.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
138.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
138.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
138.4
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
138.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
138.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
138.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
138.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
137.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
137.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
136.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
136.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
136.5
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
136.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
136.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
135.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
135.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
135.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
135.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
135.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
135.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
135.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
135.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
135.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
135.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
134.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
134.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
134.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
134.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
133.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
133.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
133.1
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
133.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
133.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
133.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
132.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
132.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
132.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
131.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
131.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
131.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
130.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
130.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
130.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
130.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
130.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
129.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
129.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
129.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
129.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
129.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
129.1
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
129.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
128.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
127.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
127.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
127.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
127.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
127.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
126.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
126.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
126.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
125.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
124.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
124.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
124.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
124.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
124.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
124.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
123.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
123.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
123.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
123.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
123.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
123.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
123.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
122.8
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
122.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
122.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
122.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
122.1
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
121.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
121.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
121.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
121.2
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
121.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
121.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
120.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
120.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
119.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
119.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
119.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
119.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
119.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
118.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
118.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
118.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
118.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
117.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
117.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
117.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
117.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
117.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
116.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
116.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
116.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
116.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
116.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
116.1
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
116.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
115.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
115.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
114.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
114.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
114.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
114.6
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
114.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
113.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
113.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
113.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
113.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
113.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
112.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
112.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
112.4
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
112.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
111.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
111.8
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
111.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
111.6
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
110.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
110.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
110.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
110.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
110.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
110.5
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
109.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
109.5
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
109.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
108.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
108.6
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
108.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
108.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
108.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
107.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
107.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
107.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
107.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
107.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
107.0
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
106.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
106.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
106.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
106.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
106.1
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
105.9
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
105.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
105.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
105.3
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
105.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
104.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
104.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
104.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
104.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
104.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
103.9
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
103.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
103.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
103.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
102.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
102.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
102.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
102.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
102.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
101.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
101.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
101.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
101.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
100.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
100.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
100.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
100.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
100.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
99.5
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
99.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
98.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
97.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
97.5
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
97.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
97.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
96.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
96.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
96.5
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
96.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
94.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
94.5
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
94.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
94.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
94.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
93.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
93.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
93.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
92.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
92.0
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
91.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
91.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
90.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
90.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
89.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
89.2
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
88.9
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
87.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
87.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
87.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
87.3
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
87.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
87.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
86.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
86.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
86.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
85.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
85.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
85.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
84.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
84.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
84.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
83.5
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
82.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
82.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
81.8
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
81.2
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
80.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
80.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
79.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
78.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
78.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
78.3
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
77.9
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
77.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
76.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
75.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
74.9
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
74.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
74.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
73.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
73.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
72.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
72.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
72.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
70.7
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
69.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
69.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
68.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
67.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
66.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
66.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
66.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
64.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
63.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
62.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
62.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
61.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
61.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
60.0
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
59.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
59.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
57.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
56.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
56.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
56.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
55.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
54.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
51.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
50.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
47.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
43.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
41.5
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
41.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
38.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
36.1
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
35.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
35.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
34.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
31.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
31.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
30.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
27.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
26.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
25.5
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
21.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
21.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
19.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HDGF is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
141.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
456.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
303.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
247.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
243.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
210.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
206.7
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
195.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
195.0
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
193.0
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
191.7
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
190.8
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
187.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
180.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
178.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
177.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
176.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
174.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
173.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
169.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
168.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
163.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
162.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
161.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
160.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
160.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
159.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
157.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
156.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
156.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
154.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
154.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
154.0
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
153.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
149.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
148.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
147.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
146.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
146.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
146.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
146.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
143.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
142.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
142.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
138.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
137.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
137.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
135.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
135.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
135.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
134.4
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
133.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
132.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
131.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
131.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
130.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
129.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
128.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
125.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
123.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
123.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
123.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
123.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
122.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
122.7
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
122.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
122.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
121.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
119.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
118.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
118.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
118.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
118.3
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
118.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
117.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
116.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
113.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
113.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
112.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
112.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
110.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
110.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
110.3
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
109.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
108.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
107.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
106.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
105.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
100.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
99.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
97.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
96.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
94.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
93.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
80.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
76.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
74.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
74.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
71.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
65.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HDGF is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
148.4
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
564.7
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
371.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
348.1
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
330.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
326.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
316.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
299.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
292.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
291.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
284.3
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
270.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
256.5
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
256.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
255.3
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
247.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
244.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
241.8
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
240.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
239.5
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
239.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
233.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
231.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
228.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
223.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
222.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
221.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
221.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
216.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
214.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
213.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
212.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
211.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
210.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
208.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
207.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
207.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
207.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
205.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
205.7
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
205.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
205.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
204.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
203.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
202.0
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
201.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
199.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
198.6
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
198.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
196.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
195.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
192.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
192.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
191.8
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
191.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
191.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
191.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
189.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
188.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
186.6
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
184.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
182.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
181.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
180.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
179.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
179.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
179.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
179.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
178.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
178.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
177.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
177.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
177.6
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
177.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
175.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
175.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
174.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
170.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
170.3
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
169.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
168.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
168.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
168.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
167.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
167.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
166.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
166.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
166.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
166.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
166.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
166.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
165.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
164.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
164.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
164.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
164.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
164.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
162.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
162.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
160.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
160.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
159.4
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
159.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
158.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
157.5
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
155.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
154.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
154.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
154.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
154.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
154.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
153.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
153.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
153.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
153.5
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
152.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
152.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
151.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
151.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
150.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
150.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
150.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
149.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
149.4
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
148.8
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
148.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
148.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
147.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
147.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
147.4
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
147.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
147.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
146.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
145.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
145.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
144.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
144.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
144.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
143.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
142.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
142.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
142.4
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
140.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
140.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
140.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
139.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
139.5
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
138.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
137.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
137.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
137.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
136.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
136.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
136.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
135.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
135.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
135.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
135.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
134.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
134.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
133.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
133.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
131.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
131.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
131.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
131.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
130.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
130.3
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
129.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
129.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
129.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
129.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
129.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
129.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
129.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
127.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
127.3
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
127.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
126.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
126.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
125.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
125.9
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
125.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
125.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
125.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
125.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
121.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
121.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
121.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
121.6
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
120.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
120.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
118.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
117.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
117.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
116.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
116.7
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
116.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
115.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
115.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
114.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
114.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
114.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
114.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
113.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
113.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
113.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
112.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
111.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
110.4
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
110.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
109.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
109.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
107.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
106.4
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
106.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
104.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
103.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
103.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
102.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
102.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
101.9
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
101.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
101.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
101.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
100.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
99.8
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
99.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
99.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
98.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
98.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
98.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
97.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
97.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
97.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
95.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
94.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
93.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
92.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
92.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
91.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
91.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
89.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
89.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
87.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
87.7
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
87.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
87.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
86.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
86.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
86.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
86.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
85.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
85.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
85.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
85.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
84.9
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
83.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
81.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
77.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
77.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
76.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
76.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
76.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
73.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
71.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
70.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
70.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
68.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
68.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
67.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
66.7
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
60.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
59.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
58.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
57.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
57.2
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
55.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
53.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
35.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
29.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
24.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012900004
Tumor
1.2
CPT0017410003
Tumor
1.0
CPT0086820003
Tumor
0.9
CPT0077110003
Tumor
0.8
CPT0024670003
Tumor
0.7
CPT0006440003
Tumor
0.7
CPT0085670003
Tumor
0.7
CPT0009060003
Tumor
0.7
CPT0071150004
Tumor
0.7
CPT0026410003
Tumor
0.7
CPT0086950003
Tumor
0.7
CPT0014370004
Tumor
0.6
CPT0078990003
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0012370003
Tumor
0.5
CPT0010160003
Tumor
0.5
CPT0010110003
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0065430003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0025580004
Tumor
0.4
CPT0001180009
Tumor
0.4
CPT0012180003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0078830003
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0088900003
Tumor
0.3
CPT0002350011
Tumor
0.3
CPT0069160003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0077490003
Tumor
0.3
CPT0024680001
Normal
0.3
CPT0006630003
Tumor
0.3
CPT0009080003
Normal
0.3
CPT0000640003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0012080003
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0077320001
Normal
0.2
CPT0065870003
Tumor
0.2
CPT0079230003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0012770003
Normal
0.2
CPT0001220008
Tumor
0.2
CPT0015730003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0092190003
Normal
0.1
CPT0075720003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0012920003
Normal
0.1
CPT0007320003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0000660001
Normal
0.1
CPT0014350001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0017850003
Tumor
0.1
CPT0088630003
Tumor
0.1
CPT0009020003
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0079300001
Normal
0.1
CPT0066470004
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0092730003
Tumor
0.1
CPT0025920001
Normal
0.1
CPT0078530001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0077500001
Normal
0.0
CPT0079410003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0069000003
Tumor
0.0
CPT0023710001
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0025170003
Tumor
0.0
CPT0001230001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0019130003
Tumor
0.0
CPT0007870001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0086370003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0079510001
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0019160001
Normal
0.0
CPT0066520001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0069190001
Normal
0.0
CPT0075130003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0078800003
Tumor
0.0
CPT0001260009
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0010120001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0078670001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0065450001
Normal
0.0
CPT0015910003
Tumor
0.0
CPT0089480003
Normal
0.0
CPT0069010001
Normal
0.0
CPT0007470001
Normal
0.0
CPT0020020001
Normal
0.0
CPT0076350001
Normal
0.0
CPT0086830003
Normal
0.0
CPT0014470001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0018250001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0014130001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0026420001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0066430001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0001340003
Tumor
-0.1
CPT0001190001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0000790001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0086890003
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0023350003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0079380003
Tumor
-0.2
CPT0079430001
Normal
-0.2
CPT0064370003
Tumor
-0.2
CPT0088550004
Tumor
-0.2
CPT0021240003
Tumor
-0.2
CPT0012550003
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0063330001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0089020003
Tumor
-0.2
CPT0088920001
Normal
-0.2
CPT0088690003
Tumor
-0.2
CPT0012670003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0081880003
Tumor
-0.2
CPT0012290003
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0075560003
Tumor
-0.3
CPT0086970003
Normal
-0.3
CPT0092290003
Tumor
-0.4
CPT0088970003
Tumor
-0.4
CPT0002270011
Tumor
-0.5
CPT0078510003
Tumor
-0.5
CPT0011410003
Tumor
-0.5
CPT0076330003
Tumor
-0.7
CPT0079180003
Tumor
-1.0
CPT0078660003
Tumor
-1.2
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
