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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
67.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
426.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
222.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
146.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
121.0
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
121.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
103.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
90.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
86.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
78.4
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
77.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
74.6
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
72.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
71.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
69.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
68.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
68.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
67.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
65.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
64.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
63.7
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
63.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
62.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
62.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
61.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
60.9
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
60.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
60.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
60.1
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
60.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
59.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
59.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
59.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
58.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
56.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
55.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
54.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
54.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
53.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
51.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
50.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
50.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
48.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
47.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
47.4
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
47.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
46.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
46.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
46.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
45.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
45.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
45.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
44.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
41.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
40.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
39.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
38.3
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
38.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
37.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
36.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
35.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
34.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
33.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
32.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN2 is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
70.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
265.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
256.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
210.7
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
197.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
188.6
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
186.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
186.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
175.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
168.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
160.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
147.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
145.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
144.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
138.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
136.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
133.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
132.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
130.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
126.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
125.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
123.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
122.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
120.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
120.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
118.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
118.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
118.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
117.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
117.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
114.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
114.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
114.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
112.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
112.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
111.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
110.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
110.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
109.8
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
109.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
108.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
108.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
108.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
108.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
108.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
108.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
107.3
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
106.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
106.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
106.1
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
105.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
104.0
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
103.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
103.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
102.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
102.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
101.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
99.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
98.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
98.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
98.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
98.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
98.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
98.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
96.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
95.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
95.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
95.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
95.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
94.6
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
94.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
93.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
93.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
93.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
92.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
92.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
92.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
91.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
91.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
91.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
91.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
90.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
90.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
90.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
90.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
89.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
89.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
89.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
88.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
87.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
87.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
87.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
87.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
87.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
87.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
86.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
86.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
86.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
86.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
86.2
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
85.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
85.6
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
85.5
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
85.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
85.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
85.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
84.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
84.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
84.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
84.6
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
84.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
84.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
84.2
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
84.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
83.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
83.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
83.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
83.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
83.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
83.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
83.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
82.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
82.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
82.7
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
82.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
82.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
82.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
82.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
81.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
81.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
81.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
81.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
81.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
81.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
81.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
81.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
80.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
80.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
80.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
80.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
80.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
80.3
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
80.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
80.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
80.1
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
79.9
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
79.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
79.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
79.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
79.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
79.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
79.2
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
78.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
78.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
78.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
78.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
78.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
78.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
78.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
78.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
77.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
77.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
77.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
77.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
77.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
76.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
76.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
76.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
76.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
75.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
75.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
75.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
75.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
74.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
74.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
74.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
74.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
74.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
74.2
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
74.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
73.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
73.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
73.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
73.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
72.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
72.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
72.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
72.2
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
72.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
72.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
71.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
71.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
71.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
71.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
71.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
71.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
71.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
71.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
71.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
71.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
70.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
70.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
70.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
70.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
70.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
70.5
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
70.2
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
70.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
70.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
70.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
70.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
70.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
70.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
69.9
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
69.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
69.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
69.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
69.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
69.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
69.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
69.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
68.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
68.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
68.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
68.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
68.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
68.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
68.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
68.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
68.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
68.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
68.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
68.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
68.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
68.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
68.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
68.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
67.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
67.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
67.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
67.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
67.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
66.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
66.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
66.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
66.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
66.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
66.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
66.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
65.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
65.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
65.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
65.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
65.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
65.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
65.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
65.1
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
64.9
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
64.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
64.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
64.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
64.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
64.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
64.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
64.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
64.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
64.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
64.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
64.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
64.2
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
64.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
64.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
64.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
63.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
63.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
63.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
63.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
63.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
63.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
63.4
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
63.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
63.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
63.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
63.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
63.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
63.0
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
63.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
62.8
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
62.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
62.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
62.2
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
62.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
62.2
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
62.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
61.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
61.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
61.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
61.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
61.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
61.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
61.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
61.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
61.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
61.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
61.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
61.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
61.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
61.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
60.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
60.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
60.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
60.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
60.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
60.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
60.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
60.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
59.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
59.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
59.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
59.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
59.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
59.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
59.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
59.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
59.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
58.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
58.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
58.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
58.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
58.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
58.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
58.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
58.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
58.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
58.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
58.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
58.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
57.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
57.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
57.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
57.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
57.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
57.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
57.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
57.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
57.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
57.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
57.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
57.2
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
57.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
57.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
57.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
56.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
56.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
56.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
56.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
56.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
56.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
56.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
56.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
56.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
56.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
56.2
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
56.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
56.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
56.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
55.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
55.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
55.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
55.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
55.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
55.4
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
55.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
55.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
55.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
54.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
54.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
54.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
54.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
54.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
54.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
54.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
54.6
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
54.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
54.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
54.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
54.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
54.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
53.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
53.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
53.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
53.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
53.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
53.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
53.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
53.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
53.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
52.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
52.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
52.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
52.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
52.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
52.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
51.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
51.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
51.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
51.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
51.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
51.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
51.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
51.2
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
51.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
51.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
50.8
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
50.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
50.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
50.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
50.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
50.3
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
50.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
50.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
50.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
50.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
50.1
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
49.8
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
49.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
49.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
49.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
48.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
48.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
48.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
48.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
48.7
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
48.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
48.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
48.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
48.3
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
48.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
48.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
48.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
48.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
47.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
47.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
47.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
47.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
47.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
46.8
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
46.7
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
46.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
46.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
46.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
46.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
46.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
46.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
45.8
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
45.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
45.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
45.2
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
45.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
44.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
44.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
44.8
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
44.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
44.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
44.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
44.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
44.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
43.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
43.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
43.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
43.5
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
43.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
43.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
42.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
42.5
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
42.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
42.1
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
42.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
41.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
41.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
41.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
41.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
41.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
40.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
40.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
40.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
40.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
39.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
38.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
38.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
38.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
37.9
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
37.8
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
37.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
37.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
37.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
37.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
37.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
36.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
36.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
36.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
36.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
35.1
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
34.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
34.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
33.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
32.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
32.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
32.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
31.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
30.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
29.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
28.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
28.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
24.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
22.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
22.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
21.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
21.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
19.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
14.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN2 is validated prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
77.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
309.8
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
231.7
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
208.3
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
204.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
203.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
147.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
116.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
115.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
111.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
103.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
102.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
99.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
98.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
97.6
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
97.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
96.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
93.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
90.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
90.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
89.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
86.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
86.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
85.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
84.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
83.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
82.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
82.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
79.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
79.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
78.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
78.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
77.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
75.6
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
75.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
75.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
73.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
73.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
72.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
71.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
70.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
70.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
70.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
70.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
70.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
69.8
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
69.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
69.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
69.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
68.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
68.4
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
67.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
67.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
67.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
67.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
65.7
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
64.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
63.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
62.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
62.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
62.5
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
62.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
61.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
61.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
61.8
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
61.6
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
61.4
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
61.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
61.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
60.3
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
59.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
59.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
58.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
58.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
58.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
58.2
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
58.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
58.1
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
57.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
57.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
56.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
56.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
55.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
55.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
55.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
54.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
53.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
52.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
51.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
50.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
49.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
49.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
49.2
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
48.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
48.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
47.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
44.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
44.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
36.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
35.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PFDN2 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
90.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
256.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
239.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
238.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
227.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
179.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
170.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
169.4
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
169.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
165.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
164.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
158.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
158.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
155.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
151.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
150.0
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
148.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
147.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
141.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
140.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
139.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
138.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
137.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
137.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
137.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
136.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
136.0
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
134.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
134.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
133.6
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
133.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
131.5
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
131.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
130.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
129.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
129.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
129.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
128.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
128.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
126.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
125.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
125.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
124.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
124.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
123.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
123.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
122.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
121.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
121.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
121.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
121.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
120.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
119.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
118.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
117.2
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
116.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
116.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
115.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
113.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
113.5
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
113.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
113.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
112.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
112.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
112.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
111.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
111.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
111.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
111.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
110.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
110.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
110.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
109.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
109.8
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
109.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
108.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
108.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
108.6
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
107.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
105.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
105.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
105.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
104.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
104.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
103.3
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
103.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
103.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
102.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
101.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
101.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
101.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
101.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
101.5
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
101.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
100.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
100.2
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
98.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
98.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
98.0
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
97.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
97.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
97.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
97.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
97.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
96.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
96.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
96.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
96.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
96.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
95.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
95.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
95.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
94.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
94.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
94.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
94.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
94.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
93.8
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
93.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
93.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
93.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
93.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
92.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
92.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
91.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
91.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
91.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
91.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
91.0
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
90.8
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
90.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
90.7
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
90.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
90.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
89.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
89.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
89.2
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
89.1
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
88.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
88.5
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
88.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
87.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
87.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
87.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
86.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
86.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
86.4
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
86.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
84.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
84.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
83.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
83.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
83.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
82.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
82.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
82.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
82.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
82.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
81.9
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
81.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
81.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
81.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
81.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
80.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
80.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
80.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
80.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
80.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
79.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
79.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
78.5
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
78.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
78.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
78.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
77.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
77.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
76.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
76.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
76.5
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
76.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
75.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
75.2
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
74.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
74.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
74.4
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
74.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
74.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
73.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
73.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
73.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
73.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
72.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
72.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
72.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
72.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
71.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
70.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
70.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
69.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
69.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
68.8
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
68.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
68.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
67.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
67.5
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
67.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
67.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
66.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
65.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
64.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
64.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
63.9
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
63.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
63.3
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
63.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
63.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
62.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
62.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
62.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
62.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
62.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
62.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
62.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
61.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
60.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
60.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
60.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
60.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
59.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
59.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
59.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
59.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
59.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
59.1
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
58.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
58.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
58.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
58.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
57.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
57.1
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
56.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
56.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
56.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
55.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
55.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
54.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
54.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
54.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
54.5
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
54.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
54.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
54.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
53.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
53.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
53.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
51.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
51.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
51.2
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
50.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
49.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
46.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
46.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
45.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
43.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
43.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
43.4
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
41.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
40.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
40.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
35.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
33.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
32.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
32.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
32.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
30.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
29.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
28.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
25.1
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
23.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
17.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
12.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
11.5
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.7
CPT0000640003
Tumor
0.7
CPT0078660003
Tumor
0.6
CPT0012280003
Tumor
0.5
CPT0012900004
Tumor
0.5
CPT0009000003
Tumor
0.5
CPT0088970003
Tumor
0.5
CPT0002350011
Tumor
0.5
CPT0021240003
Tumor
0.5
CPT0025880003
Tumor
0.5
CPT0086950003
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0006440003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0084560003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0081880003
Tumor
0.4
CPT0015810003
Tumor
0.4
CPT0001540009
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0077490003
Tumor
0.4
CPT0006630003
Tumor
0.4
CPT0015730003
Tumor
0.3
CPT0065930003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0017410003
Tumor
0.3
CPT0024670003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0079480003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0014450004
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0089460004
Tumor
0.3
CPT0079270003
Tumor
0.3
CPT0025110003
Tumor
0.3
CPT0012550003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0001180009
Tumor
0.2
CPT0079410003
Tumor
0.2
CPT0069160003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0001260009
Tumor
0.2
CPT0078830003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0071150004
Tumor
0.2
CPT0025350003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0092790003
Tumor
0.2
CPT0012370003
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0024680001
Normal
0.1
CPT0075130003
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0089020003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0026410003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0077110003
Tumor
0.1
CPT0082010001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0010110003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0066480003
Tumor
0.1
CPT0078510003
Tumor
0.1
CPT0014160003
Tumor
0.1
CPT0020120003
Tumor
0.1
CPT0065810003
Tumor
0.1
CPT0009080003
Normal
0.0
CPT0001500009
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0007860003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0010170001
Normal
0.0
CPT0002270011
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0076350001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0086030003
Tumor
0.0
CPT0063320003
Tumor
0.0
CPT0079000001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0012920003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0065750003
Tumor
0.0
CPT0014370004
Tumor
0.0
CPT0001350001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0001270001
Normal
0.0
CPT0013790003
Normal
0.0
CPT0009020003
Normal
0.0
CPT0084590001
Normal
0.0
CPT0065820001
Normal
0.0
CPT0089040001
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0077140001
Normal
-0.1
CPT0092740003
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0069190001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0088630003
Tumor
-0.1
CPT0092800003
Normal
-0.1
CPT0025170003
Tumor
-0.1
CPT0088570001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0079300001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0075720003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0078670001
Normal
-0.1
CPT0019160001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0077500001
Normal
-0.1
CPT0012640003
Normal
-0.1
CPT0063330001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0023360001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0000660001
Normal
-0.1
CPT0087050003
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0065450001
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0064400001
Normal
-0.2
CPT0015910003
Tumor
-0.2
CPT0025920001
Normal
-0.2
CPT0088780001
Normal
-0.2
CPT0078800003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0086890003
Normal
-0.2
CPT0092730003
Tumor
-0.2
CPT0000790001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0088710001
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0017850003
Tumor
-0.2
CPT0025290003
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0075570001
Normal
-0.2
CPT0001510001
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0066430001
Normal
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
