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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
161.4
nTPM
HPA Brain:
55.7
nTPM
GTEx:
161.4
nTPM
FANTOM5:
82.4
Scaled Tags Per Million
Pig:
18.2
nTPM
Mouse:
80.6
nTPM
Allen mouse:
5.9
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
55.7
Sample id
Sample description
nTPM
Amygdala nTPM: 55.7
2814
Male, age 76, right hemisphere
67.6
2695
Female, age 67, right hemisphere
66.6
1987
Female, age 91, left hemisphere
53.1
2514
Male, age 75, right hemisphere
46.5
2517
Female, age 94, left hemisphere
44.5
Basal amygdala nTPM: 53.8
1955
Male, age 76, both hemispheres
61.1
2827
Female, age 67, right hemisphere
60.4
2110
Male, age 80, left hemisphere
57.2
2685
Female, age 94, left hemisphere
50.4
2243
Female, age 91, right hemisphere
47.0
2609
Male, age 75, right hemisphere
46.4
Central amygdala nTPM: 53.9
2826
Female, age 94, left hemisphere
67.7
1905
Male, age 76, both hemispheres
63.2
2239
Male, age 80, left hemisphere
53.7
2701
Female, age 91, right hemisphere
45.6
2515
Male, age 75, right hemisphere
39.5
Corticomedial amygdala nTPM: 46.5
2429
Female, age 94, left hemisphere
51.0
2829
Male, age 80, left hemisphere
50.3
2240
Male, age 76, both hemispheres
48.7
2535
Female, age 67, right hemisphere
46.0
2242
Female, age 91, right hemisphere
43.4
2428
Male, age 75, right hemisphere
39.3
Lateral amygdala nTPM: 53.3
2830
Female, age 67, right hemisphere
67.8
1883
Male, age 76, both hemispheres
65.9
2534
Female, age 94, left hemisphere
58.4
2516
Male, age 75, right hemisphere
48.3
2256
Male, age 80, left hemisphere
40.1
2255
Female, age 91, right hemisphere
39.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
161.4
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 161.4
Samples: 152
Max nTPM: 392.1
Min nTPM: 96.1
Std nTPM: 43.8
Median nTPM: 159.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
392.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
322.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
316.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
263.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
255.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
254.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
245.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
232.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
230.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
226.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
221.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
219.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
218.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
214.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
210.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
210.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
209.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
206.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
205.5
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
204.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
204.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
202.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
200.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
196.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
191.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
191.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
190.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
190.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
188.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
186.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
186.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
186.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
183.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
182.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
181.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
180.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
179.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
179.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
178.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
178.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
177.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
177.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
176.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
175.7
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
175.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
175.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
175.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
174.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
174.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
171.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
171.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
170.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
170.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
168.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
168.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
167.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
166.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
165.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
164.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
164.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
163.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
163.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
163.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
163.2
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
163.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
162.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
162.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
162.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
161.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
161.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
161.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
160.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
160.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
160.1
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
159.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
159.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
159.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
157.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
155.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
154.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
154.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
154.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
152.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
151.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
150.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
150.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
150.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
149.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
148.3
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
148.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
147.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
146.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
146.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
145.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
145.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
144.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
144.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
143.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
141.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
140.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
140.5
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
139.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
137.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
137.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
137.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
136.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
136.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
136.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
135.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
135.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
135.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
135.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
134.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
133.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
132.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
131.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
130.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
130.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
129.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
128.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
125.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
125.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
124.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
124.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
123.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
122.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
122.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
121.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
119.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
119.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
118.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
118.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
117.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
117.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
116.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
115.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
115.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
114.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
113.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
111.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
109.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
109.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
106.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
105.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
105.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
104.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
101.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
100.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
100.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
98.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
96.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
96.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
80.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 80.6
Samples: 4
Max nTPM: 88.5
Min nTPM: 74.4
Sample A
Male
74.4
Sample B
Male
80.9
Sample C
Female
88.5
Sample D
Female
78.6
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.