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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRF is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.0
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
93.1
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
89.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
86.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
85.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
81.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
81.6
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
72.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
69.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
66.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
65.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
61.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
59.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
59.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
55.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
55.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
54.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
54.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
52.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
50.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
50.0
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
47.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
46.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
46.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
46.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
45.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
44.9
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
44.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
43.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
40.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
40.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
39.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
39.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
39.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
38.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
38.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
37.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
36.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
36.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
35.3
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
34.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
33.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
33.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
32.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
32.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
30.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
29.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
22.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
21.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
21.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
21.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
19.8
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
19.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
18.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
16.4
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
16.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
16.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
15.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
11.1
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
8.4
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
6.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.6
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRF is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
48.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
191.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
171.3
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
168.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
148.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
137.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
131.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
129.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
128.2
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
127.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
123.7
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
123.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
121.7
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
117.3
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
116.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
115.4
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
115.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
112.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
112.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
111.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
108.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
108.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
106.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
105.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
105.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
104.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
101.3
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
101.1
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
99.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
99.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
99.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
98.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
98.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
97.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
97.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
97.3
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
97.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
95.5
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
95.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
95.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
94.0
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
92.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
91.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
91.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
90.8
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
90.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
89.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
89.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
89.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
87.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
87.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
86.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
85.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
85.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
85.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
85.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
84.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
84.6
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
84.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
83.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
82.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
82.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
81.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
81.2
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
81.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
80.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
80.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
80.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
80.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
80.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
80.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
79.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
79.5
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
79.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
78.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
78.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
77.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
77.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
77.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
76.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
76.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
76.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
76.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
76.2
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
75.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
75.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
75.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
74.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
74.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
73.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
73.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
73.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
73.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
72.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
72.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
72.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
71.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
71.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
70.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
69.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
69.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
69.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
69.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
68.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
68.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
68.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
68.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
68.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
68.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
67.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
67.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
67.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
67.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
67.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
67.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
67.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
66.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
66.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
66.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
66.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
66.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
65.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
65.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
64.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
64.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
64.4
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
64.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
64.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
64.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
64.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
63.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
63.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
63.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
63.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
63.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
63.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
63.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
62.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
62.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
62.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
62.4
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
62.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
62.2
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
61.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
61.6
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
60.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
60.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
60.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
60.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
60.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
60.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
60.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
60.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
60.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
60.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
59.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
59.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
58.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
58.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
58.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
58.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
58.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
57.5
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
57.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
57.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
57.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
57.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
57.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
56.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
56.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
56.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
56.4
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
56.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
56.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
56.1
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
56.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
55.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
55.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
55.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
55.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
54.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
54.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
54.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
54.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
54.6
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
54.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
54.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
54.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
53.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
53.3
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
52.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
52.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
52.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
52.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
52.2
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
52.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
51.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
51.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
51.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
51.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
51.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
51.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
51.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
51.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
51.3
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
51.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
50.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
50.9
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
50.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
50.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
50.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
50.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
50.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
50.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
50.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
50.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
50.1
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
50.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
49.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
49.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
49.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
49.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
49.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
49.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
49.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
49.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
48.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
48.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
48.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
48.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
48.0
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
47.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
47.6
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
47.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
47.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
47.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
47.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
46.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
46.8
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
46.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
46.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
46.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
46.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
46.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
46.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
45.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
45.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
45.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
45.0
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
44.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
44.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
44.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
44.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
44.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
44.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
44.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
44.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
44.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
43.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
43.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
43.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
43.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
43.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
43.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
43.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
42.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
42.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
42.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
42.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
42.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
42.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
42.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
42.1
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
42.1
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
42.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
42.1
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
42.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
42.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
41.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
41.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
41.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
41.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
41.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
41.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
41.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
41.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
41.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
40.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
40.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
40.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
40.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
40.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
40.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
39.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
39.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
39.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
39.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
39.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
39.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
39.2
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
39.1
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
38.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
38.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
38.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
38.6
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
38.3
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
38.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
37.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
37.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
37.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
37.6
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
37.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
37.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
37.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
37.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
37.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
37.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
37.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
37.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
37.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
37.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
36.8
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
36.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
36.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
36.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
36.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
36.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
36.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
35.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
35.8
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
35.1
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
35.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
34.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
34.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
34.7
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
34.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
34.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
34.6
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
34.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
34.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
34.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
34.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
34.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
33.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
33.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
33.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
33.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
33.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
33.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
33.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
32.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
32.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
32.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
32.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
32.5
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
32.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
32.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
32.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
32.3
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
32.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
32.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
31.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
31.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
31.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
31.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
31.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
31.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
30.8
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
30.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
30.1
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
29.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
29.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
29.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
29.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
29.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
29.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
29.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
29.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
29.0
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
28.9
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
28.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
28.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
28.3
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
28.3
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
28.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
27.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
27.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
27.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
27.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
27.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
26.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
26.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
26.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.7
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
26.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
26.7
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
26.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
26.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
26.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
26.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
26.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
26.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
26.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
26.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
25.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
25.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
25.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
25.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
25.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
25.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
25.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
25.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
24.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.8
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
24.8
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
24.7
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
24.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
24.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
24.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
24.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
24.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
24.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
24.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
23.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
23.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
23.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
23.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.0
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
23.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
22.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
22.9
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
22.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
22.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
22.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
22.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
22.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
22.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
22.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
21.9
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
21.5
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
21.4
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
21.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
21.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
20.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
20.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
20.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
20.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
20.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
20.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
20.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
20.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
19.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
19.9
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
19.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
19.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
19.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
19.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
19.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
18.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
18.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
18.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
18.5
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.4
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
18.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
17.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
17.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
17.0
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.8
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
16.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
16.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
16.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
15.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
14.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.7
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
14.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
14.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
14.1
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
13.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.7
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
12.7
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
12.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.2
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
12.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
11.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
11.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
11.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.9
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
9.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.3
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
8.0
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
7.9
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
6.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.8
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
2.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRF is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
62.1
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
181.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
172.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
139.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
132.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
118.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
114.9
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
109.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
107.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
106.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
103.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
97.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
97.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
95.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
95.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
94.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
94.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
94.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
90.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
90.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
89.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
88.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
87.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
87.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
82.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
81.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
80.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
79.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
79.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
77.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
77.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
74.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
74.6
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
74.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
70.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
69.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
68.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
68.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
67.3
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
67.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
67.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
66.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
63.3
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
62.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
59.1
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
59.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
58.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
58.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
57.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
56.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
56.3
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
56.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
55.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
55.2
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
52.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
52.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
52.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
52.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
51.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
50.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
50.2
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
49.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
48.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
45.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
45.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
43.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
43.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
42.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
41.6
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
41.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
40.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
39.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
39.0
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
38.4
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
38.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
37.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
37.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
34.2
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
33.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
32.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
32.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
31.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
31.8
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
31.4
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
31.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
30.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
30.5
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
29.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
28.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
27.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
26.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
26.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
26.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
25.6
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
24.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
23.3
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
20.9
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRF is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
58.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
435.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
278.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
249.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
182.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
177.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
164.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
161.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
160.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
150.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
150.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
148.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
137.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
137.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
131.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
130.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
129.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
124.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
123.4
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
118.6
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
118.5
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
116.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
110.3
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
106.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
105.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
105.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
103.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
102.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
101.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
99.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
96.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
95.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
90.6
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
90.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
90.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
88.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
87.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
87.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
87.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
87.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
87.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
87.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
87.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
86.4
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
85.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
84.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
83.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
83.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
83.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
83.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
81.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
81.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
81.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
81.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
79.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
79.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
79.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
79.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
77.6
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
77.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
77.0
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
76.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
76.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
75.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
75.4
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
75.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
74.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
74.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
74.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
74.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
73.6
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
73.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
73.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
73.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
72.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
72.0
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
71.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
71.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
70.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
70.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
70.0
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
69.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
69.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
69.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
68.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
68.2
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
68.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
68.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
67.3
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
66.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
65.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
65.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
65.5
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
64.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
63.6
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
63.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
63.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
61.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
61.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
61.7
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
61.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
61.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
59.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
59.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
58.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
58.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
58.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
57.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
57.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
57.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
57.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
56.7
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
56.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
56.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
56.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
56.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
55.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
55.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
55.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
53.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
53.6
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
53.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
53.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
53.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
53.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
52.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
52.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
51.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
51.1
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
51.1
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
51.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
50.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
50.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
49.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
49.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
49.3
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
49.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
49.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
48.9
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
48.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
48.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
48.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
48.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
48.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
47.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
47.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
47.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
47.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
47.1
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
46.6
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
46.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
46.3
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
46.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
45.8
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
45.7
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
45.6
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
45.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
45.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
45.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
45.0
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
44.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
44.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
44.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
44.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
43.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
43.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
43.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
43.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
43.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
43.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
43.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
43.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
43.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
42.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
42.7
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
42.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
42.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
41.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
41.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
41.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
41.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
40.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
40.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
40.4
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
40.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
40.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
39.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
39.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
39.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
39.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
39.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
39.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
39.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
38.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
38.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
38.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
38.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
37.6
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
37.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
36.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
36.2
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
36.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
35.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
35.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
35.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
35.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
35.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
34.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
34.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
34.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
33.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
33.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
32.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
32.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
32.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
32.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
32.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
31.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
31.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
31.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
31.2
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
31.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
31.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
30.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
30.4
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
30.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
29.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
29.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
29.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
28.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
28.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
28.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
28.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
27.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
26.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
26.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
25.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
24.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
24.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
24.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
24.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
24.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
23.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
23.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
23.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
23.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
22.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
22.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
22.2
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
22.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
21.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
21.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
20.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
20.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
19.3
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
19.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.9
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
18.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
18.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
18.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
18.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
17.6
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
16.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
16.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
16.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
15.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
14.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
14.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
13.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
12.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
12.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
11.8
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
11.0
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.0
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
8.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
4.1
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
0.8
CPT0012280003
Tumor
0.6
CPT0084560003
Tumor
0.6
CPT0025920001
Normal
0.6
CPT0078530001
Normal
0.5
CPT0069010001
Normal
0.5
CPT0012770003
Normal
0.5
CPT0001230001
Normal
0.5
CPT0012640003
Normal
0.5
CPT0009020003
Normal
0.5
CPT0079000001
Normal
0.5
CPT0012090003
Normal
0.5
CPT0001550001
Normal
0.5
CPT0065450001
Normal
0.5
CPT0000790001
Normal
0.5
CPT0009080003
Normal
0.4
CPT0012900004
Tumor
0.4
CPT0078840001
Normal
0.4
CPT0087050003
Normal
0.4
CPT0086890003
Normal
0.4
CPT0077140001
Normal
0.4
CPT0066430001
Normal
0.4
CPT0026420001
Normal
0.4
CPT0088500001
Normal
0.4
CPT0020020001
Normal
0.4
CPT0012570003
Normal
0.4
CPT0078940001
Normal
0.4
CPT0079430001
Normal
0.4
CPT0079300001
Normal
0.3
CPT0006730001
Normal
0.3
CPT0088640003
Normal
0.3
CPT0001350001
Normal
0.3
CPT0014350001
Normal
0.3
CPT0064400001
Normal
0.3
CPT0089040001
Normal
0.3
CPT0088920001
Normal
0.3
CPT0020130001
Normal
0.3
CPT0002370001
Normal
0.3
CPT0012920003
Normal
0.3
CPT0012290003
Normal
0.3
CPT0079510001
Normal
0.3
CPT0078660003
Tumor
0.3
CPT0077500001
Normal
0.3
CPT0078670001
Normal
0.3
CPT0007470001
Normal
0.3
CPT0019160001
Normal
0.3
CPT0001190001
Normal
0.3
CPT0025060001
Normal
0.3
CPT0025610001
Normal
0.3
CPT0086370003
Normal
0.3
CPT0064370003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0007870001
Normal
0.3
CPT0088780001
Normal
0.2
CPT0069160003
Tumor
0.2
CPT0089480003
Normal
0.2
CPT0006950001
Normal
0.2
CPT0010120001
Normal
0.2
CPT0023360001
Normal
0.2
CPT0001510001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0010170001
Normal
0.2
CPT0081620001
Normal
0.2
CPT0086970003
Normal
0.2
CPT0024680001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0063640001
Normal
0.2
CPT0023710001
Normal
0.2
CPT0092310003
Normal
0.2
CPT0069190001
Normal
0.2
CPT0092740003
Normal
0.2
CPT0076350001
Normal
0.2
CPT0014130001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0077310003
Tumor
0.2
CPT0000660001
Normal
0.2
CPT0000890001
Normal
0.1
CPT0075570001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0066520001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0069000003
Tumor
0.1
CPT0006530001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0013790003
Normal
0.0
CPT0014470001
Normal
0.0
CPT0078930003
Tumor
0.0
CPT0025580004
Tumor
0.0
CPT0082010001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0079410003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0081880003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0089460004
Tumor
-0.1
CPT0019990003
Tumor
-0.1
CPT0023690003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0088480003
Tumor
-0.1
CPT0078800003
Tumor
-0.1
CPT0019130003
Tumor
-0.1
CPT0000870016
Tumor
-0.1
CPT0088970003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0092790003
Tumor
-0.1
CPT0001500009
Tumor
-0.1
CPT0020120003
Tumor
-0.1
CPT0084590001
Normal
-0.2
CPT0006440003
Tumor
-0.2
CPT0001270001
Normal
-0.2
CPT0001260009
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0024670003
Tumor
-0.2
CPT0086360003
Tumor
-0.2
CPT0014160003
Tumor
-0.2
CPT0001180009
Tumor
-0.2
CPT0065810003
Tumor
-0.2
CPT0092160003
Tumor
-0.2
CPT0077490003
Tumor
-0.2
CPT0025170003
Tumor
-0.2
CPT0077320001
Normal
-0.2
CPT0009000003
Tumor
-0.2
CPT0086030003
Tumor
-0.2
CPT0014450004
Tumor
-0.2
CPT0010110003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0001340003
Tumor
-0.2
CPT0063320003
Tumor
-0.3
CPT0079480003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0025350003
Tumor
-0.3
CPT0078830003
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0007860003
Tumor
-0.3
CPT0079270003
Tumor
-0.3
CPT0092290003
Tumor
-0.3
CPT0025290003
Tumor
-0.3
CPT0002270011
Tumor
-0.3
CPT0000640003
Tumor
-0.3
CPT0006630003
Tumor
-0.3
CPT0025230003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0000780007
Tumor
-0.4
CPT0066470004
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0017410003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0002350011
Tumor
-0.4
CPT0065930003
Tumor
-0.4
CPT0092190003
Normal
-0.4
CPT0012670003
Tumor
-0.4
CPT0071150004
Tumor
-0.4
CPT0021240003
Tumor
-0.4
CPT0010160003
Tumor
-0.4
CPT0088900003
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0007320003
Tumor
-0.5
CPT0078510003
Tumor
-0.5
CPT0086820003
Tumor
-0.5
CPT0088690003
Tumor
-0.5
CPT0077110003
Tumor
-0.5
CPT0088760003
Tumor
-0.5
CPT0075130003
Tumor
-0.5
CPT0026410003
Tumor
-0.5
CPT0015910003
Tumor
-0.5
CPT0015810003
Tumor
-0.6
CPT0081600003
Tumor
-0.6
CPT0012080003
Tumor
-0.6
CPT0001540009
Tumor
-0.6
CPT0065690003
Tumor
-0.6
CPT0025880003
Tumor
-0.6
CPT0065870003
Tumor
-0.6
CPT0012550003
Tumor
-0.6
CPT0011410003
Tumor
-0.6
CPT0023350003
Tumor
-0.6
CPT0025110003
Tumor
-0.6
CPT0017850003
Tumor
-0.7
CPT0012370003
Tumor
-0.7
CPT0009060003
Tumor
-0.7
CPT0081990003
Tumor
-0.7
CPT0078990003
Tumor
-0.7
CPT0092730003
Tumor
-0.7
CPT0088630003
Tumor
-0.7
CPT0079230003
Tumor
-0.8
CPT0086870003
Tumor
-0.8
CPT0015730003
Tumor
-0.9
CPT0085670003
Tumor
-1.0
CPT0088550004
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
