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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOSIP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
106.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
94.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
91.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
88.6
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
86.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
85.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
76.6
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
71.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
70.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
69.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
65.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
61.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
58.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
56.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
56.6
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
56.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
55.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
54.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
54.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
52.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
51.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
50.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
49.8
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
48.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
47.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
45.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
45.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
44.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
44.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
43.9
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
42.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
41.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
41.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
41.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
40.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
39.4
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
39.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
38.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
38.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
38.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
37.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
37.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
37.4
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
36.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
34.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
33.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
33.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
32.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
31.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
31.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
30.9
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
30.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
30.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
29.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
28.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
28.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
28.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
27.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
25.7
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
24.9
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
23.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
16.7
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOSIP is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
46.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
295.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
122.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
105.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
96.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
96.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
95.4
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
89.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
83.1
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
81.3
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
77.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
73.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
73.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
72.8
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
72.3
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
72.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
71.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
69.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
68.7
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
68.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
68.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
68.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
67.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
66.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
66.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
66.6
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
66.5
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
66.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
66.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
66.2
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
65.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
65.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
65.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
65.5
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
65.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
64.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
64.5
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
64.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
64.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
64.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
64.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
63.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
63.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
63.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
63.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
63.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
62.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
62.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
62.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
62.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
61.6
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
61.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
61.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
61.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
60.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
60.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
60.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
60.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
60.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
60.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
59.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
59.8
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
59.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
59.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
59.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
59.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
59.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
59.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
59.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
59.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
58.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
58.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
58.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
58.7
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
58.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
58.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
58.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
58.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
58.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
57.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
57.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
57.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
57.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
57.3
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
57.3
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
57.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
57.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
57.0
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
56.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
56.9
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
56.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
56.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
56.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
56.3
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
56.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
56.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
56.0
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
55.9
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
55.8
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
55.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
55.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
55.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
55.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
55.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
55.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
55.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
54.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
54.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
54.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
54.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
54.8
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
54.7
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
54.7
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
54.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
54.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
54.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
54.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
54.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
54.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
54.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
53.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
53.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
53.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
53.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
53.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
53.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
53.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
53.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
53.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
53.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
52.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
52.7
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
52.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
52.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
52.6
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
52.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
52.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
52.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
52.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
52.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
52.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
52.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
52.2
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
52.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
52.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
52.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
51.8
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
51.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
51.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
51.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
51.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
51.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
51.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
51.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
51.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
51.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
51.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
51.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
51.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
51.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
51.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
51.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
50.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
50.9
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
50.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
50.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
50.7
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
50.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
50.6
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
50.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
50.6
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
50.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
50.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
50.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
50.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
50.1
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
49.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
49.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
49.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
49.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
49.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
49.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
49.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
49.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
49.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
49.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
49.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
49.5
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
49.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
49.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
49.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
49.3
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
49.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
49.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
49.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
48.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
48.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
48.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
48.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
48.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
48.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
48.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
48.4
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
48.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
48.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
48.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
48.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
48.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
48.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
47.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
47.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
47.7
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
47.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
47.5
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
47.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
47.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
47.2
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
47.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
47.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
47.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
47.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
47.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
46.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
46.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
46.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
46.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
46.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
46.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
46.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
46.7
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
46.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
46.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
46.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
46.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
46.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
46.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
46.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
46.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
46.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
46.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
46.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
46.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
45.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
45.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
45.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
45.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
45.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
45.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
45.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
45.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
45.4
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
45.3
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
45.3
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
45.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
45.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
45.3
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
45.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
45.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
45.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
45.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
45.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
45.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
45.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
44.9
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
44.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
44.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
44.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
44.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
44.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
44.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
44.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
44.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
44.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
44.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
44.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
44.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
44.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
44.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
44.2
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
44.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
44.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
44.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
44.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
44.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
43.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
43.9
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
43.8
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
43.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
43.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
43.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
43.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
43.5
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
43.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
43.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
43.2
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
43.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
43.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
42.9
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
42.9
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
42.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
42.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
42.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
42.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
42.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
42.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
42.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
42.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
42.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
42.3
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
42.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
42.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
42.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
42.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
42.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
42.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
42.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
42.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
42.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
41.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
41.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
41.8
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
41.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
41.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
41.6
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
41.6
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
41.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
41.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
41.4
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
41.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
41.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
41.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
41.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
41.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
41.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
41.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
41.0
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
41.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
40.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
40.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
40.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
40.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
40.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
40.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
40.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
40.7
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
40.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
40.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
40.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
40.4
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
40.3
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
40.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
40.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
40.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
40.1
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
40.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
39.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
39.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
39.6
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
39.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
39.3
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
39.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
39.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
39.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
39.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
39.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
38.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
38.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
38.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
38.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
38.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
38.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
38.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
38.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
38.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
38.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
38.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
38.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
38.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
38.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
38.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
38.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
37.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
37.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
37.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
37.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
37.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
37.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
37.6
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
37.6
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
37.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
37.4
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
37.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
37.3
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
37.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
37.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
36.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
36.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
36.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
36.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
36.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
36.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
36.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
36.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
36.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
36.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
36.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
35.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
35.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
35.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
35.9
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
35.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
35.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
35.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
35.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
35.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
35.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
35.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
35.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
35.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
35.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
35.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
35.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
35.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
34.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
34.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
34.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
34.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
34.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
34.6
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
34.6
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
34.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
34.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
34.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
33.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
33.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
33.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
33.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
33.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
33.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
33.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
33.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
33.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
33.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
33.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
33.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
33.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
33.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
32.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
32.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
32.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
32.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
31.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
31.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
31.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
31.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
31.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
31.6
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
31.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
31.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
31.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
31.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
31.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
31.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
30.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
30.8
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
30.7
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
30.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
30.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
30.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
30.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
29.8
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
29.8
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
29.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
29.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
29.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
29.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
29.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
29.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
29.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
28.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
28.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
28.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
28.7
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
28.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
28.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
28.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
28.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
27.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
27.2
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
27.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
27.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
26.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
26.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
26.5
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
26.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
25.8
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
25.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
25.4
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
25.4
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
25.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
25.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
24.7
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
24.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
24.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
24.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
23.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
23.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
23.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
22.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
20.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
20.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
20.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
19.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
18.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
16.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
16.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
14.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOSIP is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
64.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
59.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
56.7
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
53.9
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
52.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
52.2
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
51.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
49.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
48.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
48.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
46.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
46.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
45.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
45.6
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
44.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
44.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
44.0
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
43.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
42.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
42.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
42.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
42.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
42.0
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
41.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
41.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
39.8
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
39.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
39.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
39.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
39.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
39.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
38.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
38.9
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
38.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
38.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
38.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
38.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
38.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
38.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
38.4
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
38.0
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
37.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
37.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.2
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
37.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
37.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
36.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
36.3
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
36.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
36.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
35.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
35.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
35.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
34.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
34.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
34.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
34.7
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
34.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
34.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
33.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
33.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
33.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
33.2
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
33.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
33.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
32.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
32.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
31.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
31.7
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
31.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
31.6
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
31.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
30.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
30.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
29.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
29.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
28.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
28.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
27.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
27.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
26.8
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
26.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
26.2
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
25.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
25.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
24.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
24.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
23.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
23.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.0
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
22.7
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
22.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
22.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
21.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
21.2
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
NOSIP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
52.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
151.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
134.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
132.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
126.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
121.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
117.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
114.9
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
110.6
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
108.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
102.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
102.2
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
101.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
99.6
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
95.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
95.1
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
92.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
90.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
87.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
87.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
86.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
85.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
80.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
80.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
79.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
79.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
77.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
77.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
76.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
76.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
75.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
74.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
74.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
74.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
74.2
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
73.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
72.4
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
72.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
72.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
72.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
71.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
71.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
70.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
69.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
69.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
69.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
69.2
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
69.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
68.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
67.4
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
67.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
67.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
66.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
65.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
65.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
65.0
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
64.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
64.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
63.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
63.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
63.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
63.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
63.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
63.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
62.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
62.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
62.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
62.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
61.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
61.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
61.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
61.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
61.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
60.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
60.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
60.0
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
60.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
59.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
59.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
59.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
59.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
59.2
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
58.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
58.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
58.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
58.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
58.4
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
58.4
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
58.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
58.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
57.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
57.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
57.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
57.3
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
56.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
56.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
56.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
56.2
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
56.0
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
55.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
55.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
55.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
55.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
54.9
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
54.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
54.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
54.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
54.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
54.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
54.7
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
54.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
54.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
54.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
54.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
54.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
53.9
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
53.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
53.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
53.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
53.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
53.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
53.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
53.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
52.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
52.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
52.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
51.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
51.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
51.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
51.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
51.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
51.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
51.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
51.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
50.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
50.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
50.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
50.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
50.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
49.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
49.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
49.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
49.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
49.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
48.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
48.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
48.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
48.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
48.6
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
48.5
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
48.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
48.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
48.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
47.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
47.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
47.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
47.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
47.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
47.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
47.1
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
47.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
46.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
46.4
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
46.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
46.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
46.0
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
45.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
45.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
45.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
45.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
45.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
45.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
45.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
45.2
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
45.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
45.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
45.1
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
45.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
44.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
44.9
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
44.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
44.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
44.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
44.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
44.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
44.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
44.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
43.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
43.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
43.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
43.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
43.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
43.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
43.2
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
43.2
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
43.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
43.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
43.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
42.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
42.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
42.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
42.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
42.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
41.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
41.9
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
41.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
41.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
41.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
41.2
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
41.2
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
41.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
40.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
40.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
40.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
40.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
40.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
40.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
39.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
39.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
39.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
39.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
39.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
38.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
38.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
38.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
38.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
38.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
38.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
38.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
38.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
38.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
37.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
37.7
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
37.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
37.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
37.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
37.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
36.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
36.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
36.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
36.0
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
35.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
35.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
35.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
35.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
35.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
34.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
33.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
33.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
33.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
33.0
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
32.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
32.9
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
32.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
32.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
31.2
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
31.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
30.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
29.6
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
29.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
29.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
29.0
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
28.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
28.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
28.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
27.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
27.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
27.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
26.8
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
26.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
26.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
26.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
25.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
25.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
24.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
24.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
22.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
8.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
0.8
CPT0001180009
Tumor
0.8
CPT0006440003
Tumor
0.7
CPT0017410003
Tumor
0.6
CPT0024670003
Tumor
0.6
CPT0079180003
Tumor
0.6
CPT0012180003
Tumor
0.6
CPT0014450004
Tumor
0.6
CPT0014370004
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0088550004
Tumor
0.5
CPT0071150004
Tumor
0.5
CPT0001540009
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0069160003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0026410003
Tumor
0.4
CPT0086870003
Tumor
0.4
CPT0012640003
Normal
0.4
CPT0012080003
Tumor
0.4
CPT0092190003
Normal
0.4
CPT0063320003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0001260009
Tumor
0.3
CPT0078990003
Tumor
0.3
CPT0078660003
Tumor
0.3
CPT0075170001
Normal
0.3
CPT0085670003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0081600003
Tumor
0.3
CPT0077320001
Normal
0.3
CPT0077110003
Tumor
0.3
CPT0075130003
Tumor
0.3
CPT0088900003
Tumor
0.2
CPT0025580004
Tumor
0.2
CPT0002350011
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0092730003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0081990003
Tumor
0.2
CPT0065430003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0077490003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0011240003
Tumor
0.2
CPT0065820001
Normal
0.2
CPT0009000003
Tumor
0.2
CPT0065870003
Tumor
0.2
CPT0079380003
Tumor
0.2
CPT0017450001
Normal
0.2
CPT0088630003
Tumor
0.2
CPT0079300001
Normal
0.2
CPT0081880003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0001270001
Normal
0.2
CPT0010160003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0001230001
Normal
0.1
CPT0088690003
Tumor
0.1
CPT0013790003
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0012900004
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0066470004
Tumor
0.1
CPT0001220008
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0092160003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0078830003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0079510001
Normal
0.1
CPT0086820003
Tumor
0.1
CPT0006900003
Tumor
0.1
CPT0088570001
Normal
0.1
CPT0076330003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0025050003
Tumor
0.1
CPT0075570001
Normal
0.0
CPT0063330001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0078670001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0010120001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0079230003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0025920001
Normal
0.0
CPT0012550003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0000660001
Normal
0.0
CPT0079000001
Normal
0.0
CPT0007320003
Tumor
0.0
CPT0023350003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0069190001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0006530001
Normal
0.0
CPT0023360001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0089460004
Tumor
0.0
CPT0001190001
Normal
0.0
CPT0000890001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0009020003
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0012090003
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0066480003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0088500001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0012770003
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0015810003
Tumor
-0.1
CPT0014350001
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0001350001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0081620001
Normal
-0.1
CPT0012570003
Normal
-0.1
CPT0012280003
Tumor
-0.1
CPT0021240003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0063630003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0006730001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0078930003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0089480003
Normal
-0.1
CPT0069000003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0025060001
Normal
-0.1
CPT0092790003
Tumor
-0.1
CPT0087050003
Normal
-0.2
CPT0065450001
Normal
-0.2
CPT0007470001
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0088780001
Normal
-0.2
CPT0019990003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0086970003
Normal
-0.2
CPT0020120003
Tumor
-0.2
CPT0078840001
Normal
-0.2
CPT0023690003
Tumor
-0.2
CPT0082010001
Normal
-0.2
CPT0006950001
Normal
-0.2
CPT0084560003
Tumor
-0.2
CPT0077140001
Normal
-0.2
CPT0023710001
Normal
-0.2
CPT0092800003
Normal
-0.2
CPT0077500001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0020020001
Normal
-0.2
CPT0078800003
Tumor
-0.2
CPT0007860003
Tumor
-0.2
CPT0065930003
Tumor
-0.2
CPT0092310003
Normal
-0.2
CPT0026420001
Normal
-0.2
CPT0014160003
Tumor
-0.3
CPT0086950003
Tumor
-0.3
CPT0019130003
Tumor
-0.3
CPT0066430001
Normal
-0.3
CPT0011410003
Tumor
-0.3
CPT0015730003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0065750003
Tumor
-0.4
CPT0077310003
Tumor
-0.4
CPT0075560003
Tumor
-0.4
CPT0064370003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0078510003
Tumor
-0.6
CPT0001500009
Tumor
-0.6
CPT0092290003
Tumor
-1.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
