We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IFITM3 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2834.7
Number of samples
349
Samples
Sample
Description
TPM
TCGA-23-1030-01A
0 years, female, white, stage:Stage IIIC, alive, 886 days
10990.1
TCGA-13-0911-01A
0 years, female, white, stage:Stage IV, dead, 1355 days
9447.6
TCGA-59-2348-01A
0 years, female, white, stage:Stage IIIC, alive, 5481 days
8653.3
TCGA-25-1319-01A
0 years, female, white, stage:Stage IIIC, dead, 1977 days
8376.0
TCGA-13-1511-01A
0 years, female, asian, stage:Stage IV, dead, 1650 days
6821.6
TCGA-13-0765-01A
0 years, female, white, stage:Stage IIIC, dead, 1389 days
6725.8
TCGA-13-1492-01A
0 years, female, white, stage:Stage IIIC, dead, 3819 days
6635.5
TCGA-23-1123-01A
0 years, female, white, stage:Stage IIIC, dead, 1018 days
6621.0
TCGA-13-1410-01A
0 years, female, white, stage:Stage IV, alive, 2464 days
6550.8
TCGA-25-1312-01A
0 years, female, white, stage:Stage IV, dead, 31 days
6457.7
TCGA-61-1733-01A
0 years, female, white, stage:Stage IIIC, alive, 967 days
6385.8
TCGA-23-1024-01A
0 years, female, white, stage:Stage IV, alive, 468 days
6320.8
TCGA-24-1603-01A
0 years, female, white, stage:Stage IIIB, dead, 2742 days
6212.1
TCGA-13-1509-01A
0 years, female, white, stage:Stage IV, alive, 2438 days
5668.8
TCGA-24-2271-01A
0 years, female, asian, stage:Stage IIIC, dead, 962 days
5643.4
TCGA-13-0727-01A
0 years, female, white, stage:Stage IIIC, dead, 462 days
5612.7
TCGA-04-1519-01A
0 years, female, stage:Stage IIIC, alive, 24 days
5610.9
TCGA-31-1950-01A
0 years, female, white, stage:Stage IIIC, alive, 571 days
5592.6
TCGA-29-1766-01A
0 years, female, white, stage:Stage IIIC, dead, 1199 days
5481.1
TCGA-24-0966-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 232 days
5469.7
TCGA-25-1633-01A
0 years, female, white, stage:Stage IIIC, dead, 1891 days
5448.2
TCGA-13-0923-01A
0 years, female, white, stage:Stage IIIC, alive, 2547 days
5363.3
TCGA-25-1322-01A
0 years, female, white, stage:Stage IV, dead, 91 days
5282.5
TCGA-13-0887-01A
0 years, female, white, stage:Stage IIIC, dead, 2028 days
5272.7
TCGA-09-2051-01A
0 years, female, white, stage:Stage IIIC, alive, 1919 days
5251.1
TCGA-13-1496-01A
0 years, female, white, stage:Stage IIIC, dead, 129 days
5193.8
TCGA-04-1341-01A
0 years, female, white, stage:'--, alive, 33 days
5162.4
TCGA-25-1320-01A
0 years, female, white, stage:Stage IIIC, dead, 1155 days
5094.8
TCGA-13-1405-01A
0 years, female, white, stage:Stage IV, dead, 868 days
5050.0
TCGA-61-2101-01A
0 years, female, white, stage:Stage IIIC, dead, 1688 days
5041.1
TCGA-23-1118-01A
0 years, female, white, stage:Stage IIIC, alive, 2616 days
5005.0
TCGA-29-1697-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
4905.7
TCGA-13-1512-01A
0 years, female, white, stage:Stage IIIC, alive, 442 days
4901.3
TCGA-25-2396-01A
0 years, female, white, stage:Stage IIIC, dead, 92 days
4880.2
TCGA-13-1507-01A
0 years, female, white, stage:Stage IIIC, dead, 1993 days
4868.1
TCGA-30-1866-01A
0 years, female, white, stage:Stage IV, dead, 1114 days
4832.7
TCGA-59-2352-01A
0 years, female, white, stage:Stage IIIC, dead, 286 days
4787.6
TCGA-09-1666-01A
0 years, female, white, stage:Stage IIIC, alive, 1752 days
4774.7
TCGA-59-2350-01A
0 years, female, stage:Stage IV, dead, 679 days
4752.2
TCGA-29-1696-01A
0 years, female, white, stage:Stage IIIC, dead, 1032 days
4682.5
TCGA-13-0720-01A
0 years, female, white, stage:Stage IIIC, dead, 1355 days
4669.3
TCGA-13-0891-01A
0 years, female, white, stage:Stage IV, dead, 3128 days
4654.1
TCGA-13-0924-01A
0 years, female, white, stage:Stage IV, alive, 2614 days
4653.1
TCGA-61-2110-01A
0 years, female, white, stage:Stage IIIC, dead, 1354 days
4576.4
TCGA-24-1416-01A
0 years, female, white, stage:Stage IV, alive, 194 days
4565.3
TCGA-61-1738-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
4557.3
TCGA-13-1498-01A
0 years, female, white, stage:Stage IIIC, dead, 2012 days
4556.9
TCGA-29-1769-01A
0 years, female, white, stage:Stage IIIC, alive, 699 days
4555.2
TCGA-25-1321-01A
0 years, female, white, stage:Stage IIIC, dead, 1033 days
4550.4
TCGA-13-0897-01A
0 years, female, white, stage:Stage IIIC, dead, 2182 days
4530.9
TCGA-10-0931-01A
0 years, female, white, stage:Stage IIIC, dead, 1000 days
4527.1
TCGA-23-1111-01A
0 years, female, white, stage:Stage IIIC, alive, 98 days
4478.4
TCGA-09-1670-01A
0 years, female, white, stage:Stage IIIA, alive, 547 days
4461.9
TCGA-30-1853-01A
0 years, female, white, stage:Stage IIIC, dead, 1103 days
4386.2
TCGA-04-1350-01A
0 years, female, white, stage:Stage IIIC, dead, 1946 days
4346.9
TCGA-24-1842-01A
0 years, female, white, stage:Stage IIIC, alive, 253 days
4340.7
TCGA-24-1560-01A
0 years, female, white, stage:Stage IIIC, dead, 1341 days
4200.7
TCGA-20-0987-01A
0 years, female, white, stage:Stage IIIC, dead, 701 days
4196.6
TCGA-25-2409-01A
0 years, female, white, stage:Stage IV, dead, 821 days
4170.3
TCGA-25-2404-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
4169.0
TCGA-29-1785-01A
0 years, female, white, stage:Stage IIIC, dead, 1104 days
4157.3
TCGA-09-1662-01A
0 years, female, white, stage:Stage IV, dead, 2717 days
4139.8
TCGA-04-1343-01A
0 years, female, white, stage:Stage IV, dead, 361 days
4114.7
TCGA-61-2097-01A
0 years, female, white, stage:Stage IIC, alive, 1844 days
4063.1
TCGA-25-2399-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
4035.4
TCGA-24-1417-01A
0 years, female, white, stage:Stage IV, alive, 238 days
4028.3
TCGA-13-1403-01A
0 years, female, white, stage:Stage IIIC, dead, 2345 days
4014.9
TCGA-59-2354-01A
0 years, female, white, stage:Stage IIIC, dead, 1046 days
4008.3
TCGA-36-1569-01A
0 years, female, white, stage:Stage IIIC, alive, 885 days
4007.2
TCGA-36-1580-01A
0 years, female, stage:Stage IIIC, dead, 737 days
3909.7
TCGA-25-1313-01A
0 years, female, white, stage:Stage IV, dead, 820 days
3909.4
TCGA-25-1635-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
3896.3
TCGA-13-1409-01A
0 years, female, white, stage:Stage IIIC, dead, 1742 days
3894.1
TCGA-31-1946-01A
0 years, female, stage:Stage IIIC, alive, 918 days
3846.3
TCGA-57-1583-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 346 days
3842.1
TCGA-13-1499-01A
0 years, female, white, stage:Stage IIIC, alive, 3500 days
3841.9
TCGA-61-2003-01A
0 years, female, white, stage:Stage IIIC, alive, 122 days
3734.1
TCGA-25-2401-01A
0 years, female, white, stage:Stage IIIC, dead, 90 days
3724.6
TCGA-24-1604-01A
0 years, female, white, stage:Stage IIIC, dead, 2688 days
3712.6
TCGA-09-2045-01A
0 years, female, asian, stage:Stage IV, dead, 1069 days
3666.8
TCGA-30-1718-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
3645.9
TCGA-10-0937-01A
0 years, female, white, stage:Stage IIIC, dead, 608 days
3617.8
TCGA-61-2104-01A
0 years, female, white, stage:Stage IIC, alive, 2338 days
3593.5
TCGA-13-0804-01A
0 years, female, white, stage:Stage IIIC, dead, 1073 days
3579.3
TCGA-29-1688-01A
0 years, female, white, stage:Stage IIIC, dead, 2400 days
3577.1
TCGA-10-0927-01A
0 years, female, stage:Stage IIIC, dead, 2490 days
3567.4
TCGA-13-0795-01A
0 years, female, white, stage:Stage IIIC, dead, 619 days
3563.8
TCGA-24-1103-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
3552.7
TCGA-57-1584-01A
0 years, female, white, stage:Stage IIIC, alive, 643 days
3543.7
TCGA-13-1510-01A
0 years, female, white, stage:Stage IIIC, dead, 1359 days
3519.2
TCGA-61-1911-01A
0 years, female, white, stage:Stage IIA, alive, 1293 days
3516.0
TCGA-25-1317-01A
0 years, female, white, stage:Stage IIIC, dead, 61 days
3500.2
TCGA-29-1701-01A
0 years, female, white, stage:Stage IIIC, dead, 515 days
3441.5
TCGA-24-1923-01A
0 years, female, white, stage:Stage IIIC, dead, 690 days
3434.0
TCGA-24-1430-01A
0 years, female, white, stage:Stage IIIC, dead, 863 days
3416.0
TCGA-13-2060-01A
0 years, female, white, stage:Stage IV, alive, 2369 days
3395.4
TCGA-59-2355-01A
0 years, female, white, stage:Stage IV, dead, 65 days
3383.8
TCGA-24-1471-01A
0 years, female, white, stage:Stage IIIC, alive, 36 days
3342.8
TCGA-29-1768-01A
0 years, female, white, stage:Stage IV, dead, 952 days
3311.7
TCGA-24-1423-01A
0 years, female, white, stage:Stage IIIC, alive, 190 days
3306.6
TCGA-29-1693-01A
0 years, female, white, stage:Stage IIIC, alive, 3096 days
3295.0
TCGA-24-2293-01A
0 years, female, white, stage:'--, dead, 506 days
3293.9
TCGA-23-1120-01A
0 years, female, white, stage:Stage IIIC, alive, 130 days
3286.3
TCGA-13-1485-01A
0 years, female, white, stage:Stage IV, dead, 629 days
3282.6
TCGA-13-0906-01A
0 years, female, white, stage:Stage IIIC, alive, 3619 days
3273.8
TCGA-13-0725-01A
0 years, female, white, stage:Stage IIIC, dead, 377 days
3257.3
TCGA-31-1951-01A
0 years, female, white, stage:Stage IIIC, alive, 684 days
3247.4
TCGA-36-1570-01A
0 years, female, white, stage:Stage IIIC, alive, 655 days
3242.9
TCGA-23-1116-01A
0 years, female, white, stage:Stage IIIC, dead, 592 days
3233.7
TCGA-36-1571-01A
0 years, female, white, stage:Stage IIIB, dead, 695 days
3223.4
TCGA-24-2290-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
3212.7
TCGA-61-2109-01A
0 years, female, white, stage:Stage IIIC, dead, 629 days
3207.3
TCGA-31-1953-01A
0 years, female, asian, stage:Stage IIIC, alive, 204 days
3204.6
TCGA-25-1328-01A
0 years, female, white, stage:Stage IIIC, dead, 2009 days
3202.8
TCGA-61-1995-01A
0 years, female, white, stage:Stage IIIC, alive, 61 days
3198.0
TCGA-20-0991-01A
0 years, female, white, stage:Stage IIB, alive, 797 days
3197.8
TCGA-24-1928-01A
0 years, female, white, stage:Stage IIIC, dead, 336 days
3192.6
TCGA-13-1487-01A
0 years, female, white, stage:Stage IV, dead, 681 days
3154.8
TCGA-23-1028-01A
0 years, female, white, stage:Stage IIIC, alive, 1503 days
3128.8
TCGA-61-1914-01A
0 years, female, stage:Stage IIIC, alive, 1722 days
3119.2
TCGA-24-1413-01A
0 years, female, white, stage:Stage IIIC, alive, 192 days
3113.5
TCGA-13-0726-01A
0 years, female, white, stage:Stage IIIC, dead, 949 days
3101.5
TCGA-24-2024-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
3095.3
TCGA-24-2298-01A
0 years, female, white, stage:Stage IIIC, dead, 1620 days
3089.5
TCGA-13-1489-01A
0 years, female, white, stage:Stage IIIC, dead, 2553 days
3072.3
TCGA-23-2084-01A
0 years, female, white, stage:Stage IV, dead, 1516 days
3060.2
TCGA-29-2427-01A
0 years, female, white, stage:Stage IIIC, alive, 1900 days
3039.4
TCGA-04-1365-01A
0 years, female, white, stage:Stage IIIB, alive, 947 days
3035.8
TCGA-24-1418-01A
0 years, female, white, stage:Stage IIIC, alive, 243 days
3028.3
TCGA-24-2033-01A
0 years, female, white, stage:Stage IIIC, dead, 562 days
3022.2
TCGA-30-1891-01A
0 years, female, white, stage:Stage IIIC, dead, 914 days
3017.0
TCGA-25-1329-01A
0 years, female, white, stage:Stage IIIC, dead, 457 days
3008.9
TCGA-20-1683-01A
0 years, female, white, stage:Stage IIIC, alive, 772 days
2999.6
TCGA-24-2038-01A
0 years, female, white, stage:Stage IIIA, dead, 1354 days
2998.8
TCGA-29-1763-01A
0 years, female, black or african american, stage:Stage IIC, alive, 2032 days
2998.7
TCGA-24-1424-01A
0 years, female, white, stage:Stage IIIC, alive, 183 days
2994.1
TCGA-29-2428-01A
0 years, female, white, stage:Stage IIIC, alive, 1372 days
2955.9
TCGA-23-1107-01A
0 years, female, white, stage:Stage IV, dead, 9 days
2948.6
TCGA-25-1632-01A
0 years, female, white, stage:Stage IV, dead, 1799 days
2946.2
TCGA-36-1576-01A
0 years, female, stage:Stage IIIC, alive, 915 days
2938.7
TCGA-13-0883-01A
0 years, female, white, stage:Stage IIIC, dead, 2097 days
2931.7
TCGA-13-0886-01A
0 years, female, white, stage:Stage IIIC, alive, 4665 days
2927.0
TCGA-61-1741-01A
0 years, female, white, stage:Stage IIIB, dead, 1024 days
2926.2
TCGA-61-2008-01A
0 years, female, asian, stage:Stage IIC, alive, 932 days
2899.0
TCGA-25-1630-01A
0 years, female, white, stage:Stage IIIC, dead, 1162 days
2897.9
TCGA-30-1860-01A
0 years, female, white, stage:Stage IIIC, dead, 1366 days
2895.3
TCGA-24-1435-01A
0 years, female, white, stage:Stage IIIC, dead, 1324 days
2888.6
TCGA-29-1690-01A
0 years, female, white, stage:Stage IIIC, dead, 1448 days
2884.6
TCGA-61-2000-01A
0 years, female, white, stage:Stage IIIC, alive, 441 days
2879.2
TCGA-25-1631-01A
0 years, female, white, stage:Stage IIIC, dead, 9 days
2858.0
TCGA-61-1724-01A
0 years, female, white, stage:Stage IIIC, dead, 637 days
2850.5
TCGA-24-2036-01A
0 years, female, white, stage:Stage IIIA, dead, 1947 days
2848.9
TCGA-29-1694-01A
0 years, female, white, stage:Stage IIIC, dead, 1187 days
2847.0
TCGA-24-1546-01A
0 years, female, white, stage:Stage IIIC, dead, 1955 days
2844.1
TCGA-24-2288-01A
0 years, female, white, stage:Stage IIIC, dead, 25 days
2833.8
TCGA-23-1023-01A
0 years, female, white, stage:Stage IIIC, alive, 1233 days
2819.4
TCGA-29-1705-01A
0 years, female, white, stage:Stage IIIC, dead, 555 days
2802.4
TCGA-61-1725-01A
0 years, female, white, stage:Stage IIIC, alive, 956 days
2785.1
TCGA-13-0724-01A
0 years, female, white, stage:Stage IV, dead, 83 days
2781.1
TCGA-23-1122-01A
0 years, female, white, stage:Stage IIIC, dead, 1189 days
2765.4
TCGA-24-1847-01A
0 years, female, white, stage:Stage IV, alive, 343 days
2748.1
TCGA-59-2351-01A
0 years, female, white, stage:Stage IIIC, alive, 3532 days
2745.2
TCGA-10-0933-01A
0 years, female, white, stage:Stage IIIC, dead, 446 days
2732.3
TCGA-25-2398-01A
0 years, female, white, stage:Stage IIIC, dead, 1369 days
2730.1
TCGA-24-2280-01A
0 years, female, white, stage:Stage IIIC, alive, 2143 days
2724.2
TCGA-13-0730-01A
0 years, female, white, stage:Stage IIIC, dead, 542 days
2710.1
TCGA-20-1687-01A
0 years, female, white, stage:Stage IV, alive, 81 days
2708.4
TCGA-24-1426-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
2707.1
TCGA-24-0968-01A
0 years, female, white, stage:Stage IIIC, dead, 598 days
2700.3
TCGA-24-1434-01A
0 years, female, white, stage:Stage IIIC, dead, 568 days
2670.8
TCGA-29-1695-01A
0 years, female, white, stage:Stage IIIC, dead, 1229 days
2667.2
TCGA-61-1907-01A
0 years, female, white, stage:Stage IIIC, alive, 952 days
2661.5
TCGA-29-1783-01A
0 years, female, white, stage:Stage IIIC, alive, 220 days
2650.1
TCGA-25-1623-01A
0 years, female, white, stage:Stage IV, dead, 565 days
2649.6
TCGA-29-1777-01A
0 years, female, white, stage:Stage IIIC, alive, 374 days
2639.5
TCGA-23-1027-01A
0 years, female, white, stage:Stage IIIC, dead, 976 days
2637.3
TCGA-24-2023-01A
0 years, female, white, stage:Stage IIIA, dead, 1364 days
2603.7
TCGA-30-1892-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
2603.3
TCGA-24-2297-01A
0 years, female, white, stage:Stage IIIC, dead, 1699 days
2579.4
TCGA-61-2113-01A
0 years, female, white, stage:Stage IIC, dead, 676 days
2563.5
TCGA-25-1315-01A
0 years, female, white, stage:Stage IIIC, dead, 1583 days
2552.8
TCGA-25-1628-01A
0 years, female, white, stage:Stage IIIC, dead, 627 days
2528.7
TCGA-24-2261-01A
0 years, female, white, stage:Stage IIIC, dead, 24 days
2525.0
TCGA-29-1781-01A
0 years, female, white, stage:Stage IIIC, alive, 255 days
2523.1
TCGA-13-0768-01A
0 years, female, white, stage:Stage IIIC, dead, 1784 days
2512.9
TCGA-24-1469-01A
0 years, female, white, stage:Stage IIIC, alive, 277 days
2512.0
TCGA-24-1565-01A
0 years, female, white, stage:Stage IIIC, dead, 312 days
2505.2
TCGA-13-0800-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
2499.3
TCGA-24-1464-01A
0 years, female, white, stage:Stage IIIC, dead, 379 days
2495.2
TCGA-24-1616-01A
0 years, female, white, stage:Stage IIIC, dead, 1163 days
2474.4
TCGA-13-1483-01A
0 years, female, white, stage:Stage IIIC, dead, 895 days
2436.9
TCGA-36-1568-01A
0 years, female, stage:Stage IIIC, alive, 875 days
2436.8
TCGA-13-0797-01A
0 years, female, white, stage:Stage IIIC, alive, 2121 days
2420.3
TCGA-61-2088-01A
0 years, female, white, stage:Stage IIIC, alive, 145 days
2412.7
TCGA-13-1501-01A
0 years, female, white, stage:Stage IV, dead, 1314 days
2411.0
TCGA-24-1422-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 23 days
2408.9
TCGA-57-1993-01A
0 years, female, white, stage:Stage IIIC, alive, 763 days
2386.7
TCGA-61-1919-01A
0 years, female, white, stage:Stage IIIC, dead, 1161 days
2381.8
TCGA-29-1776-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 360 days
2379.0
TCGA-59-2363-01A
0 years, female, asian, stage:Stage IIIA, alive, 165 days
2343.0
TCGA-24-1544-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 820 days
2329.8
TCGA-24-1557-01A
0 years, female, white, stage:Stage IIIC, dead, 1213 days
2317.4
TCGA-10-0938-01A
0 years, female, white, stage:Stage IIIC, dead, 636 days
2305.6
TCGA-13-1488-01A
0 years, female, white, stage:Stage IV, dead, 2154 days
2298.7
TCGA-10-0928-01A
0 years, female, white, stage:Stage IIIC, dead, 563 days
2284.1
TCGA-23-1109-01A
0 years, female, white, stage:Stage IIIC, dead, 1562 days
2280.1
TCGA-VG-A8LO-01A
0 years, female, black or african american, stage:Stage IV, dead, 24 days
2269.7
TCGA-24-1562-01A
0 years, female, white, stage:Stage IIIC, dead, 1384 days
2262.9
TCGA-24-0982-01A
0 years, female, white, stage:Stage IIIC, dead, 679 days
2260.9
TCGA-04-1361-01A
0 years, female, white, stage:Stage IIIB, alive, 989 days
2251.1
TCGA-24-1549-01A
0 years, female, white, stage:Stage IIIB, dead, 1721 days
2227.6
TCGA-36-1574-01A
0 years, female, asian, stage:Stage IIIC, alive, 686 days
2217.2
TCGA-23-2077-01A
0 years, female, white, stage:Stage IIIC, alive, 3525 days
2216.0
TCGA-30-1862-01A
0 years, female, white, stage:Stage IV, dead, 186 days
2213.0
TCGA-61-1998-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
2211.6
TCGA-24-1563-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
2201.6
TCGA-24-2281-01A
0 years, female, white, stage:Stage IIA, alive, 1357 days
2192.4
TCGA-24-0979-01A
0 years, female, white, stage:Stage IV, dead, 1264 days
2189.2
TCGA-25-1626-01A
0 years, female, white, stage:Stage IIIC, dead, 518 days
2181.1
TCGA-25-1627-01A
0 years, female, white, stage:Stage IIIC, dead, 394 days
2176.0
TCGA-61-1721-01A
0 years, female, white, stage:Stage IV, alive, 338 days
2162.6
TCGA-24-1550-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
2161.2
TCGA-36-1581-01A
0 years, female, white, stage:Stage IIC, alive, 751 days
2156.9
TCGA-04-1332-01A
0 years, female, white, stage:Stage IIIC, dead, 1247 days
2139.4
TCGA-61-1918-01A
0 years, female, white, stage:Stage IV, dead, 479 days
2117.6
TCGA-09-1673-01A
0 years, female, white, stage:Stage IV, alive, 92 days
2074.8
TCGA-24-1551-01A
0 years, female, white, stage:Stage IIIC, dead, 1579 days
2072.0
TCGA-61-2002-01A
0 years, female, white, stage:Stage IIIC, alive, 547 days
2069.8
TCGA-31-1959-01A
0 years, female, white, stage:Stage IV, alive, 67 days
2068.4
TCGA-24-1553-01A
0 years, female, white, stage:Stage IIIB, dead, 1767 days
2047.2
TCGA-04-1331-01A
0 years, female, white, stage:Stage IIIC, dead, 1336 days
2030.7
TCGA-13-A5FT-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
2027.2
TCGA-09-0366-01A
0 years, female, white, stage:Stage IIIC, dead, 1757 days
2023.2
TCGA-04-1651-01A
0 years, female, white, stage:Stage IIIC, dead, 1102 days
2014.7
TCGA-24-1467-01A
0 years, female, white, stage:Stage IIIC, dead, 3224 days
1961.6
TCGA-29-1770-01A
0 years, female, white, stage:Stage IIIC, alive, 741 days
1957.8
TCGA-24-1428-01A
0 years, female, white, stage:Stage IIIC, alive, 529 days
1954.6
TCGA-09-0367-01A
0 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
1946.4
TCGA-29-1711-01A
0 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
1910.8
TCGA-29-1710-01A
0 years, female, white, stage:Stage IIIC, dead, 951 days
1907.4
TCGA-04-1362-01A
0 years, female, white, stage:Stage IIC, dead, 1348 days
1904.6
TCGA-24-2267-01A
0 years, female, white, stage:Stage IIB, dead, 1446 days
1900.4
TCGA-13-0888-01A
0 years, female, white, stage:Stage IIIC, dead, 2811 days
1896.9
TCGA-25-1318-01A
0 years, female, white, stage:Stage IIIC, dead, 1064 days
1892.0
TCGA-61-2009-01A
0 years, female, white, stage:Stage IIIC, alive, 1212 days
1878.8
TCGA-13-1407-01A
0 years, female, white, stage:Stage IIIC, alive, 2534 days
1866.9
TCGA-24-2289-01A
0 years, female, white, stage:Stage IV, dead, 2049 days
1857.1
TCGA-24-1427-01A
0 years, female, stage:Stage IIIC, alive, 147 days
1855.5
TCGA-24-2035-01A
0 years, female, white, stage:Stage IIIC, dead, 857 days
1853.9
TCGA-24-1105-01A
0 years, female, white, stage:Stage IIIC, dead, 1442 days
1844.9
TCGA-24-1930-01A
0 years, female, white, stage:Stage IIIC, dead, 2467 days
1841.7
TCGA-29-1703-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
1841.2
TCGA-31-1956-01A
0 years, female, white, stage:Stage IIIB, alive, 1342 days
1839.9
TCGA-04-1542-01A
0 years, female, white, stage:Stage IIIB, dead, 2561 days
1836.7
TCGA-61-2012-01A
0 years, female, white, stage:Stage IIC, alive, 932 days
1833.5
TCGA-25-1323-01A
0 years, female, white, stage:Stage IIIC, dead, 395 days
1815.2
TCGA-24-1844-01A
0 years, female, white, stage:Stage IIIC, alive, 113 days
1814.8
TCGA-13-0766-01A
0 years, female, white, stage:Stage IIIC, dead, 1725 days
1814.6
TCGA-57-1585-01A
0 years, female, white, stage:Stage IIIC, dead, 53 days
1779.5
TCGA-04-1364-01A
0 years, female, white, stage:Stage IIIC, dead, 1024 days
1775.0
TCGA-61-1728-01A
0 years, female, white, stage:Stage IV, alive, 848 days
1765.7
TCGA-61-1737-01A
0 years, female, white, stage:Stage IV, alive, 1364 days
1748.2
TCGA-29-A5NZ-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
1740.5
TCGA-25-1316-01A
0 years, female, white, stage:Stage IIIC, dead, 1279 days
1726.8
TCGA-25-2392-01A
0 years, female, white, stage:Stage IV, dead, 31 days
1720.9
TCGA-5X-AA5U-01A
0 years, female, black or african american, stage:Stage IIC, alive, 361 days
1704.6
TCGA-23-1113-01A
0 years, female, white, stage:Stage IV, dead, 949 days
1695.0
TCGA-23-1022-01A
0 years, female, white, stage:Stage IIIC, dead, 1511 days
1685.8
TCGA-24-1845-01A
0 years, female, white, stage:Stage IIIC, alive, 116 days
1680.3
TCGA-25-2042-01A
0 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
1677.4
TCGA-13-0762-01A
0 years, female, white, stage:Stage IIIC, alive, 3400 days
1665.0
TCGA-24-1924-01A
0 years, female, white, stage:Stage IIIC, dead, 919 days
1655.0
TCGA-09-1669-01A
0 years, female, white, stage:Stage IIIA, alive, 928 days
1654.9
TCGA-24-1843-01A
0 years, female, white, stage:Stage IIIC, alive, 106 days
1653.8
TCGA-24-1425-01A
0 years, female, white, stage:Stage IIIC, alive, 181 days
1631.8
TCGA-24-1104-01A
0 years, female, white, stage:Stage IV, dead, 1933 days
1620.9
TCGA-13-0885-01A
0 years, female, white, stage:Stage IIIC, alive, 3388 days
1605.9
TCGA-29-1778-01A
0 years, female, white, stage:Stage IIIC, alive, 454 days
1598.4
TCGA-24-1419-01A
0 years, female, white, stage:Stage IIIC, alive, 239 days
1585.7
TCGA-61-1910-01A
0 years, female, white, stage:Stage IIC, alive, 1127 days
1581.0
TCGA-30-1857-01A
0 years, female, white, stage:Stage IV, dead, 8 days
1580.1
TCGA-25-1634-01A
0 years, female, white, stage:Stage IIIC, dead, 1091 days
1578.4
TCGA-57-1586-01A
0 years, female, white, stage:Stage IIIC, alive, 679 days
1577.2
TCGA-29-2425-01A
0 years, female, white, stage:Stage IIIC, alive, 1977 days
1575.1
TCGA-04-1655-01A
0 years, female, white, stage:Stage IIIB, dead, 1380 days
1573.4
TCGA-13-0916-01A
0 years, female, white, stage:Stage IIIC, alive, 1785 days
1565.1
TCGA-30-1861-01A
0 years, female, white, stage:Stage IIIC, dead, 1058 days
1523.2
TCGA-29-2414-01A
0 years, female, white, stage:Stage IIIC, dead, 2621 days
1515.0
TCGA-09-0369-01A
0 years, female, white, stage:Stage IIIC, dead, 1082 days
1503.7
TCGA-24-2027-01A
0 years, female, white, stage:Stage IV, dead, 3337 days
1498.7
TCGA-13-1497-01A
0 years, female, white, stage:Stage IIIC, alive, 3871 days
1488.1
TCGA-13-1408-01A
0 years, female, white, stage:Stage IIIC, dead, 1680 days
1483.7
TCGA-09-2054-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 637 days
1469.9
TCGA-24-1846-01A
0 years, female, stage:Stage IIIC, alive, 133 days
1465.9
TCGA-29-1762-01A
0 years, female, white, stage:Stage IV, dead, 2634 days
1462.3
TCGA-25-1870-01A
0 years, female, white, stage:Stage IIIC, dead, 455 days
1445.9
TCGA-29-1784-01A
0 years, female, white, stage:Stage IIIC, alive, 163 days
1370.4
TCGA-13-1506-01A
0 years, female, white, stage:Stage IIIC, dead, 1039 days
1366.9
TCGA-13-1505-01A
0 years, female, white, stage:Stage IIIC, alive, 1998 days
1365.5
TCGA-13-1404-01A
0 years, female, white, stage:Stage IIIC, alive, 2469 days
1351.1
TCGA-04-1648-01A
0 years, female, white, stage:Stage IIIC, dead, 871 days
1335.8
TCGA-WR-A838-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 304 days
1333.0
TCGA-57-1994-01A
0 years, female, white, stage:'--, alive, 761 days
1322.0
TCGA-61-2102-01A
0 years, female, white, stage:Stage IIIC, dead, 197 days
1322.0
TCGA-23-1119-01A
0 years, female, white, stage:Stage IIIC, alive, 3953 days
1278.9
TCGA-25-1326-01A
0 years, female, white, stage:Stage IIIC, dead, 1249 days
1254.5
TCGA-24-1567-01A
0 years, female, white, stage:Stage IIIB, dead, 524 days
1251.8
TCGA-61-2098-01A
0 years, female, white, stage:Stage IIIC, alive, 1993 days
1238.0
TCGA-29-1691-01A
0 years, female, white, stage:Stage IIIC, dead, 1470 days
1221.4
TCGA-23-2078-01A
0 years, female, white, stage:Stage IIIC, alive, 2661 days
1203.7
TCGA-31-1944-01A
0 years, female, white, stage:Stage IIIC, alive, 1386 days
1173.5
TCGA-20-1682-01A
0 years, female, white, stage:Stage IIIC, alive, 837 days
1169.1
TCGA-13-0920-01A
0 years, female, white, stage:Stage IIIC, dead, 1484 days
1164.6
TCGA-29-1761-01A
0 years, female, asian, stage:Stage IIIC, dead, 528 days
1141.3
TCGA-61-2111-01A
0 years, female, white, stage:Stage IV, alive, 3825 days
1107.6
TCGA-04-1347-01A
0 years, female, white, stage:Stage IV, alive, 1919 days
1105.6
TCGA-61-1900-01A
0 years, female, black or african american, stage:Stage IIIB, alive, 176 days
1104.5
TCGA-36-1577-01A
0 years, female, asian, stage:Stage IIC, alive, 783 days
1102.4
TCGA-13-1477-01A
0 years, female, white, stage:Stage IV, dead, 1662 days
1101.5
TCGA-24-2254-01A
0 years, female, white, stage:Stage IIIC, dead, 1736 days
1098.6
TCGA-30-1714-01A
0 years, female, white, stage:Stage IV, dead, 1158 days
1086.5
TCGA-25-2400-01A
0 years, female, white, stage:Stage IIIC, dead, 1278 days
1085.8
TCGA-13-1411-01A
0 years, female, white, stage:Stage IIIC, dead, 531 days
1075.3
TCGA-24-1850-01A
0 years, female, white, stage:Stage IIIC, alive, 168 days
1053.8
TCGA-24-1558-01A
0 years, female, white, stage:Stage IIIC, dead, 594 days
1039.8
TCGA-OY-A56Q-01A
0 years, female, black or african american, stage:Stage IIA, alive, 576 days
1023.6
TCGA-25-2393-01A
0 years, female, white, stage:Stage IIIC, dead, 1157 days
990.8
TCGA-04-1338-01A
0 years, female, white, stage:Stage IIIC, alive, 1418 days
965.5
TCGA-23-1809-01A
0 years, female, white, stage:Stage IIC, alive, 16 days
868.4
TCGA-13-0714-01A
0 years, female, white, stage:Stage IV, dead, 189 days
866.2
TCGA-04-1356-01A
0 years, female, white, stage:Stage IIC, dead, 1499 days
839.5
TCGA-04-1530-01A
0 years, female, white, stage:Stage IIIC, dead, 3622 days
823.2
TCGA-04-1514-01A
0 years, female, white, stage:Stage IIIA, dead, 1720 days
821.8
TCGA-23-1110-01A
0 years, female, white, stage:Stage IIIC, alive, 1658 days
796.4
TCGA-24-2026-01A
0 years, female, white, stage:Stage IIIC, dead, 1059 days
751.2
TCGA-24-1474-01A
0 years, female, black or african american, stage:Stage IIIC, dead, 676 days
745.4
TCGA-20-1686-01A
0 years, female, white, stage:Stage IIIC, alive, 89 days
678.7
TCGA-24-1431-01A
0 years, female, white, stage:Stage IIIC, dead, 583 days
676.2
TCGA-24-1552-01A
0 years, female, white, stage:Stage IIIC, dead, 1259 days
651.6
TCGA-29-1774-01A
0 years, female, white, stage:Stage IIIC, alive, 527 days
595.4
TCGA-61-2092-01A
0 years, female, white, stage:Stage IIIC, alive, 1573 days
593.7
TCGA-59-A5PD-01A
0 years, female, black or african american, stage:Stage IC, dead, 624 days
585.5
TCGA-04-1536-01A
0 years, female, black or african american, stage:Stage IV, dead, 885 days
546.7
TCGA-57-1582-01A
0 years, female, white, stage:Stage IIIC, dead, 731 days
480.3
TCGA-25-1877-01A
0 years, female, white, stage:Stage IIIC, dead, 730 days
468.3
TCGA-09-0364-01A
0 years, female, white, stage:Stage IIC, dead, 887 days
416.8
TCGA-13-1495-01A
0 years, female, white, stage:Stage IIIC, dead, 2749 days
365.5
TCGA-24-2020-01A
0 years, female, white, stage:Stage IIIC, dead, 4624 days
332.7
TCGA-09-2048-01A
0 years, female, white, stage:Stage IIIC, dead, 138 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IFITM3 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
1209.8
Number of samples
81
Samples
Sample
Description
TPM
DO46392
0 years, female, NA, stage:III, dead, 628 days
3941.5
DO46513
0 years, female, NA, stage:IV, dead, 1883 days
2979.7
DO46412
0 years, female, NA, stage:III, dead, 597 days
2976.6
DO46602
0 years, female, NA, stage:III, dead, 205 days
2555.9
DO46376
0 years, female, NA, stage:III, dead, 1430 days
2540.5
DO46528
0 years, female, NA, stage:III, alive, 6139 days
2526.5
DO46576
0 years, female, NA, stage:III, alive, 133 days
2327.0
DO46591
0 years, female, NA, stage:III, dead, 195 days
2321.7
DO46581
0 years, female, NA, stage:III, dead, 408 days
2239.8
DO46384
0 years, female, NA, stage:III, dead, 614 days
2209.8
DO46386
0 years, female, NA, stage:III, dead, 1162 days
2095.2
DO46568
0 years, female, NA, stage:III, dead, 320 days
2038.4
DO46453
0 years, female, NA, stage:III, dead, 3294 days
2025.3
DO46364
0 years, female, NA, stage:III, dead, 806 days
1992.1
DO46329
0 years, female, NA, stage:III, dead, 1699 days
1723.4
DO46352
0 years, female, NA, stage:III, dead, 677 days
1713.0
DO46360
0 years, female, NA, stage:IV, dead, 1759 days
1552.9
DO46378
0 years, female, NA, stage:III, alive, 843 days
1548.6
DO46342
0 years, female, NA, stage:III, dead, 1398 days
1487.7
DO46354
0 years, female, NA, stage:III, dead, 843 days
1462.6
DO46443
0 years, female, NA, stage:III, dead, 2464 days
1459.8
DO46468
0 years, female, NA, stage:III, alive, 2776 days
1438.5
DO46366
0 years, female, NA, stage:III, dead, 2054 days
1385.5
DO46336
0 years, female, NA, stage:IV, dead, 664 days
1342.2
DO46428
0 years, female, NA, stage:IV, alive, 2644 days
1274.5
DO46560
0 years, female, NA, stage:IV, dead, 286 days
1247.5
DO46326
0 years, female, NA, stage:III, dead, 701 days
1232.2
DO46438
0 years, female, NA, stage:IV, alive, 2227 days
1217.7
DO46350
0 years, female, NA, stage:III, dead, 886 days
1207.0
DO46463
0 years, female, NA, stage:III, dead, 2451 days
1202.6
DO46404
0 years, female, NA, stage:III, dead, 690 days
1198.9
DO46382
0 years, female, NA, stage:IV, dead, 311 days
1191.9
DO46523
0 years, female, NA, stage:IV, alive, 1873 days
1179.6
DO46394
0 years, female, NA, stage:IV, dead, 1039 days
1139.5
DO46402
0 years, female, NA, stage:III, dead, 511 days
1106.5
DO46333
0 years, female, NA, stage:III, dead, 359 days
1102.9
DO46388
0 years, female, NA, stage:III, dead, 413 days
1094.7
DO46566
0 years, female, NA, stage:III, dead, 673 days
1086.4
DO46448
0 years, female, NA, stage:III, dead, 654 days
1082.7
DO46334
0 years, female, NA, stage:III, dead, 496 days
1082.5
DO46340
0 years, female, NA, stage:III, dead, 616 days
1079.7
DO46586
0 years, female, NA, stage:III, dead, 1019 days
1069.1
DO46398
0 years, female, NA, stage:III, alive, 437 days
1067.8
DO46362
0 years, female, NA, stage:III, dead, 1639 days
1044.2
DO46380
0 years, female, NA, stage:III, dead, 1423 days
1036.1
DO46546
0 years, female, NA, stage:III, dead, 1889 days
979.7
DO46493
0 years, female, NA, stage:IV, alive, 839 days
967.6
DO46551
0 years, female, NA, stage:III, dead, 1055 days
966.4
DO46332
0 years, female, NA, stage:III, dead, 689 days
953.4
DO46597
0 years, female, NA, stage:III, dead, 393 days
885.8
DO46346
0 years, female, NA, stage:III, dead, 1187 days
878.3
DO46372
0 years, female, NA, stage:III, dead, 1326 days
858.7
DO46356
0 years, female, NA, stage:III, dead, 911 days
857.7
DO46396
0 years, female, NA, stage:III, dead, 583 days
842.9
DO46508
0 years, female, NA, stage:III, dead, 2101 days
840.6
DO46538
0 years, female, NA, stage:III, dead, 1527 days
777.8
DO46368
0 years, female, NA, stage:III, dead, 2879 days
771.9
DO46327
0 years, female, NA, stage:III, dead, 184 days
762.6
DO46561
0 years, female, NA, stage:III, dead, 195 days
760.0
DO46331
0 years, female, NA, stage:III, dead, 612 days
739.6
DO46458
0 years, female, NA, stage:IV, alive, 3787 days
711.1
DO46436
0 years, female, NA, stage:III, alive, 3193 days
710.0
DO46432
0 years, female, NA, stage:III, alive, 2218 days
707.0
DO46325
0 years, female, NA, stage:III, dead, 477 days
703.5
DO46348
0 years, female, NA, stage:IV, dead, 287 days
694.8
DO46390
0 years, female, NA, stage:III, dead, 374 days
689.9
DO46344
0 years, female, NA, stage:III, dead, 642 days
687.7
DO46374
0 years, female, NA, stage:III, dead, 1409 days
620.1
DO46370
0 years, female, NA, stage:III, dead, 1727 days
614.8
DO46408
0 years, female, NA, stage:III, dead, 489 days
590.0
DO46358
0 years, female, NA, stage:III, dead, 423 days
560.0
DO46330
0 years, female, NA, stage:III, dead, 684 days
545.1
DO46518
0 years, female, NA, stage:III, alive, 2960 days
505.9
DO46571
0 years, female, NA, stage:III, dead, 243 days
417.8
DO46533
0 years, female, NA, stage:III, alive, 3667 days
412.9
DO46328
0 years, female, NA, stage:III, dead, 972 days
411.7
DO46400
0 years, female, NA, stage:III, dead, 719 days
407.0
DO46606
0 years, female, NA, stage:III, alive, 804 days
398.2
DO46588
0 years, female, NA, stage:III, dead, 438 days
371.1
DO46611
0 years, female, NA, stage:III, dead, 734 days
362.7
DO46338
0 years, female, NA, stage:III, dead, 596 days
205.1
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
0.7
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
0.7
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
0.7
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
0.7
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
0.7
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
0.6
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
0.6
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
0.6
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
0.6
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
0.5
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
0.5
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
0.5
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
0.5
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
0.5
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
0.5
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
0.4
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
0.4
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
0.4
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
0.4
a65d8e76-640f-4341-a561-afbb57_D2
Normal
0.4
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
0.4
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
0.4
21efd60f-6a31-4b98-9477-16a905_D2
Normal
0.3
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
0.3
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
0.3
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
0.3
1772e913-f62e-446a-8cf3-720348_D2
Tumor
0.3
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
0.3
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
0.3
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
0.3
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
0.3
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
0.3
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
0.3
340a3769-3031-41ae-bb08-a2f696_D2
Normal
0.3
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
0.2
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
0.2
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
0.2
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
0.1
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
0.1
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
0.1
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
0.1
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
0.1
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
0.1
285fed94-1495-448e-879b-b55de9_D2
Tumor
0.0
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
0.0
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
0.0
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
0.0
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
0.0
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
0.0
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
-0.1
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
-0.1
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
-0.1
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
-0.1
1db5574d-aca7-403c-8100-6e705f_D2
Normal
-0.1
10c2d629-0287-4511-ac25-f29031_D2
Tumor
-0.1
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
-0.2
2f901c90-617e-46da-9fac-d68369_D2
Tumor
-0.2
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
-0.2
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
-0.2
15524912-685a-47ce-a824-567848_D2
Tumor
-0.2
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
-0.2
161317f3-1a39-438e-af45-cd2502_D2
Tumor
-0.2
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
-0.2
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
-0.2
e9d416e7-f661-400a-896e-388545_D2
Tumor
-0.2
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
-0.2
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
-0.2
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
-0.2
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
-0.2
a3a26070-fb84-406a-8280-d555e6_D2
Normal
-0.2
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
-0.3
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
-0.3
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
-0.3
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
-0.3
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
-0.3
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
-0.3
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
-0.3
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
-0.3
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
-0.3
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
-0.3
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
-0.3
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
-0.3
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
-0.4
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
-0.4
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
-0.4
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
-0.4
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
-0.4
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
-0.4
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
-0.4
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
-0.4
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
-0.4
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
-0.5
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
-0.5
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
-0.5
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
-0.5
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
-0.5
1a10c200-3895-4648-b951-94f99f_D2
Tumor
-0.5
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
-0.5
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
-0.6
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
-0.6
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
-0.6
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
-0.7
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
-0.7
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
-0.7
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
-0.8
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
-0.9
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
-0.9
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
-1.0
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.