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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
470.5
nTPM
HPA Brain:
309.3
nTPM
GTEx:
470.5
nTPM
FANTOM5:
273.2
Scaled Tags Per Million
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
309.3
Sample id
Sample description
nTPM
Amygdala nTPM: 309.3
2695
Female, age 67, right hemisphere
466.4
1987
Female, age 91, left hemisphere
323.7
2814
Male, age 76, right hemisphere
307.4
2517
Female, age 94, left hemisphere
236.7
2514
Male, age 75, right hemisphere
212.2
Basal amygdala nTPM: 242.7
1955
Male, age 76, both hemispheres
278.1
2827
Female, age 67, right hemisphere
263.6
2110
Male, age 80, left hemisphere
254.5
2243
Female, age 91, right hemisphere
249.1
2609
Male, age 75, right hemisphere
225.7
2685
Female, age 94, left hemisphere
185.4
Central amygdala nTPM: 301.6
2826
Female, age 94, left hemisphere
409.2
2515
Male, age 75, right hemisphere
334.1
1905
Male, age 76, both hemispheres
285.5
2239
Male, age 80, left hemisphere
261.7
2701
Female, age 91, right hemisphere
217.6
Corticomedial amygdala nTPM: 230.1
2240
Male, age 76, both hemispheres
274.3
2242
Female, age 91, right hemisphere
246.9
2829
Male, age 80, left hemisphere
235.0
2428
Male, age 75, right hemisphere
229.2
2535
Female, age 67, right hemisphere
208.9
2429
Female, age 94, left hemisphere
185.9
Lateral amygdala nTPM: 276.3
2830
Female, age 67, right hemisphere
371.8
2534
Female, age 94, left hemisphere
303.8
2256
Male, age 80, left hemisphere
265.5
1883
Male, age 76, both hemispheres
248.6
2516
Male, age 75, right hemisphere
244.9
2255
Female, age 91, right hemisphere
223.2
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
470.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 470.5
Samples: 152
Max nTPM: 3872.2
Min nTPM: 86.1
Std nTPM: 423.4
Median nTPM: 337.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
3872.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
2378.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
1669.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
1532.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
1230.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
1186.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
1129.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
1084.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
1084.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
1010.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
980.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
976.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
962.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
884.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
851.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
833.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
817.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
816.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
808.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
763.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
763.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
761.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
738.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
736.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
735.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
708.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
698.5
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
696.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
684.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
681.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
662.4
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
642.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
610.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
585.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
580.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
570.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
554.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
553.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
540.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
528.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
525.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
518.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
515.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
502.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
497.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
495.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
490.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
472.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
465.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
465.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
460.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
455.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
451.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
451.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
446.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
438.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
434.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
425.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
423.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
418.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
415.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
410.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
409.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
406.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
399.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
391.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
391.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
385.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
374.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
360.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
353.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
351.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
349.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
344.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
342.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
339.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
335.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
333.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
330.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
319.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
317.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
317.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
314.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
312.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
310.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
309.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
308.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
303.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
301.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
297.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
295.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
292.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
290.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
286.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
284.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
283.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
281.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
280.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
276.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
274.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
272.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
272.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
269.6
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
269.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
268.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
267.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
264.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
264.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
264.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
262.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
261.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
257.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
257.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
256.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
255.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
253.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
251.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
247.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
247.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
245.6
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
240.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
239.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
236.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
235.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
234.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
228.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
225.3
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
222.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
221.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
211.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
206.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
205.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
197.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
193.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
188.5
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
183.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
181.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
173.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
167.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
162.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
157.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
154.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
153.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
152.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
145.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
139.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
139.3
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
136.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
136.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
127.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
87.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
86.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.