We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3GL1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
88.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
73.2
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
53.3
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
45.8
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
43.7
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
39.7
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
34.5
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
34.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
31.1
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
30.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
29.6
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
29.6
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
28.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
28.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
26.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
24.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
23.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
23.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
21.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
21.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
20.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
20.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
20.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
20.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
20.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
20.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
19.7
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
19.3
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
18.7
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
17.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
17.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
17.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
16.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
16.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
16.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
16.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
15.9
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
14.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
14.6
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
14.6
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
14.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
13.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
13.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
12.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
11.9
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
11.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
11.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
10.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
10.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
10.2
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
10.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
8.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
8.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
6.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
5.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3GL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
125.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
124.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
105.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
96.2
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
94.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
89.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
88.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
87.8
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
86.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
83.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
82.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
81.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
81.4
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
80.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
80.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
78.4
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
78.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
78.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
77.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
77.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
76.9
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
76.4
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
76.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
74.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
74.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
74.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
74.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
73.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
73.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
73.3
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
72.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
72.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
72.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
71.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
71.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
71.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
71.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
71.0
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
71.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
71.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
70.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
70.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
70.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
70.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
70.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
69.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
69.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
69.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
69.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
68.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
68.8
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
68.7
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
67.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
67.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
67.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
67.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
67.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
67.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
66.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
66.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
66.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
66.6
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
66.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
66.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
66.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
65.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
65.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
65.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
65.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
64.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
64.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
63.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
63.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
63.0
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
62.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
62.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
62.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
62.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
61.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
61.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
61.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
61.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
61.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
61.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
61.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
61.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
60.9
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
60.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
60.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
60.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
60.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
60.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
60.6
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
60.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
60.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
60.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
60.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
60.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
59.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
59.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
59.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
59.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
59.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
59.1
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
59.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
59.0
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
58.9
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
58.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
58.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
58.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
58.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
58.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
58.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
57.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
57.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
57.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
57.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
57.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
57.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
57.4
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
57.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
57.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
57.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
57.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
57.0
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
56.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
56.9
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
56.8
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
56.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
56.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
56.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
56.6
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
56.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
56.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
56.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
55.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
55.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
55.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
55.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
55.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
55.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
55.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
55.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
55.5
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
55.5
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
55.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
55.1
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
55.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
54.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
54.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
54.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
54.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
54.6
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
54.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
54.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
54.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
54.4
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
54.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
54.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
54.2
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
54.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
54.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
54.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
54.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
53.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
53.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
53.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
53.7
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
53.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
53.5
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
53.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
53.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
53.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
53.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
53.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
52.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
52.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
52.5
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
52.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
52.4
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
52.3
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
52.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
52.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
52.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
52.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
51.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
51.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
51.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
51.9
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
51.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
51.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
51.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
51.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
51.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
51.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
51.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
51.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
50.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
50.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
50.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
50.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
50.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
50.4
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
50.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
50.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
50.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
50.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
50.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
50.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
50.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
50.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
50.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
49.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
49.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
49.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
49.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
49.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
49.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
49.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
49.5
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
49.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
49.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
49.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
49.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
49.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
49.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
49.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
49.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
48.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
48.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
48.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
48.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
48.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
48.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
48.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
48.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
48.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
48.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
48.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
48.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
48.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
48.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
48.0
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
47.9
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
47.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
47.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
47.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
47.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
47.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
47.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
47.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
47.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
47.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
47.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
47.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
47.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
47.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
47.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
47.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
47.3
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
47.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
47.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
47.1
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
46.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
46.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
46.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
46.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
46.7
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
46.7
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
46.4
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
46.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
46.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
46.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
46.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
46.2
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
46.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
46.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
46.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
46.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
46.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
45.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
45.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
45.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
45.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
45.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
45.5
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
45.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
45.3
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
45.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
45.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
45.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
45.0
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
44.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
44.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
44.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
44.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
44.8
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
44.8
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
44.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
44.7
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
44.7
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
44.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
44.4
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
44.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
44.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
44.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
44.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
44.2
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
44.2
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
44.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
44.2
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
44.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
43.8
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
43.7
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
43.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
43.7
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
43.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
43.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
43.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
43.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
43.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
43.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
43.1
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
43.0
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
43.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
42.9
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
42.9
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
42.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
42.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
42.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
42.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
42.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
42.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
42.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
42.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
42.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
42.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
42.1
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
42.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
41.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
41.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
41.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
41.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
41.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
41.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
41.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
41.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
41.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
41.1
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
41.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
41.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
41.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
41.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
41.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
40.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
40.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
40.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
40.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
40.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
40.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
40.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
40.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
40.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
40.2
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
39.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
39.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
39.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
39.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
39.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
39.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
39.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
39.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
39.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
39.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
39.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
39.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
39.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
39.2
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
39.2
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
39.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
39.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
39.0
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
39.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
38.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
38.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
38.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
38.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
38.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
38.4
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
38.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
38.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
38.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
38.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
38.1
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
37.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
37.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
37.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
37.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
37.9
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
37.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
37.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
37.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
37.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
37.5
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
37.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
37.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
37.2
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
37.0
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
36.9
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
36.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
36.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
36.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
36.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
36.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
36.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
36.1
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
36.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
36.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
35.9
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
35.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
35.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
35.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
35.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
35.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
35.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
35.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
35.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
34.9
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
34.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
34.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
34.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
34.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
34.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
34.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
34.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
34.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
33.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
33.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
33.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
33.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
33.4
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
33.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
33.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
33.0
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
32.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
32.7
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
32.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
32.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
32.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
32.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
32.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
32.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
31.9
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
31.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
31.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
31.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
31.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
30.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
30.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
30.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
29.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
29.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
29.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
29.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
29.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
29.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
29.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
28.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
28.5
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
28.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
28.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
28.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
27.8
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
26.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
26.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
26.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
26.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
25.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
25.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
25.5
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
25.2
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
25.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
24.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
24.9
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
24.5
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
24.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
24.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
23.8
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
23.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
23.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
23.1
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
22.7
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
22.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
22.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
22.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
20.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
19.0
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
18.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
17.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
16.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
16.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
15.7
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
15.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
12.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
10.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
10.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
10.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
9.9
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
8.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.3
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
3.9
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3GL1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
50.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
96.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
94.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
86.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
83.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
81.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
80.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
76.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
75.2
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
73.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
69.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
69.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
69.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
68.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
66.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
64.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
64.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
63.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
62.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
61.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
61.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
61.3
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
60.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
60.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
60.5
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
60.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
59.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
59.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
59.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
58.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
57.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
57.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
57.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
56.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
55.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
54.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
53.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
53.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
53.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
52.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
52.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
51.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
51.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
50.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
50.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
50.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
49.5
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
48.9
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
48.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
48.1
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
47.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
47.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
47.2
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
47.0
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
46.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
46.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
46.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
46.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
46.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
45.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
45.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
45.7
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
45.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
45.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
44.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
44.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
44.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
44.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
44.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
43.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
43.1
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
42.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
42.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
41.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
41.7
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
41.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
41.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
40.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
40.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
40.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
40.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
39.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
39.0
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
38.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
38.1
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
35.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
35.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
34.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
31.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
31.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
30.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
30.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
29.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
28.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
25.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
22.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
20.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
17.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SH3GL1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
45.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
230.4
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
123.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
122.3
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
110.1
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
101.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
100.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
98.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
98.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
94.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
89.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
86.5
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
84.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
81.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
80.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
80.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
78.5
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
77.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
74.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
73.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
73.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
73.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
72.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
72.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
71.3
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
70.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
68.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
68.6
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
67.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
67.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
67.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
67.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
66.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
66.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
66.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
64.9
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
64.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
64.2
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
64.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
63.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
62.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
62.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
62.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
62.0
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
61.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
61.7
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
61.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
61.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
61.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
60.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
60.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
59.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
59.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
58.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
57.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
57.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
57.5
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
57.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
57.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
56.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
56.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
56.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
55.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
55.4
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
55.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
54.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
54.5
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
54.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
53.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
53.5
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
53.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
53.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
52.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
52.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
52.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
52.6
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
51.2
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
51.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
50.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
50.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
50.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
50.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
50.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
50.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
50.1
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
49.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
49.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
49.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
49.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
49.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
49.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
49.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
49.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
48.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
48.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
48.5
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
48.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
48.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
48.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
47.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
47.7
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
47.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
47.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
47.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
47.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
47.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
47.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
47.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
46.7
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
46.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
46.4
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
46.4
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
46.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
45.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
45.7
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
45.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
45.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
45.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
44.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
44.6
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
44.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
44.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
44.0
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
43.8
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
43.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
43.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
43.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
43.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
43.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
43.2
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
43.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
43.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
43.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
43.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
42.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
42.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
42.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
42.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
42.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
42.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
41.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
41.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
41.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
41.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
41.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
41.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
41.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
41.6
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
41.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
41.3
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
41.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
41.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
41.0
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
40.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
40.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
40.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
40.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
40.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
40.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
40.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
40.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
39.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
39.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
39.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
39.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
39.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
39.2
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
39.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
38.9
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
38.8
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
38.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
38.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
38.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
38.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
37.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
37.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
37.5
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
37.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
37.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
36.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
36.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
36.7
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
36.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
36.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
36.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
36.4
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
36.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
36.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
36.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
36.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
36.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
35.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
35.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
35.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
35.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
35.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
35.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
35.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
35.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
35.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
34.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
34.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
34.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
34.7
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
34.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
34.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
34.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
34.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
33.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
33.8
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
33.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
33.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
33.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
33.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
33.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
32.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
32.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
32.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
32.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
32.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
32.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
31.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
31.8
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
31.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
31.7
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
31.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
31.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
31.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
30.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
30.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
30.4
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
30.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
30.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
30.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
30.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
30.0
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
29.9
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
29.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
29.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
29.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
29.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
29.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
28.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
28.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
28.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
28.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
28.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
27.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
27.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
27.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
27.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
26.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
26.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
26.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
26.5
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
26.3
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
26.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
26.2
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
26.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
25.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
24.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
24.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
24.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
24.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
24.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
24.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
23.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
23.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
22.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
22.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
21.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
21.6
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
20.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
20.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
20.4
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
19.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
18.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
18.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
17.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
14.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
12.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.2
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0001340003
Tumor
1.4
CPT0012550003
Tumor
1.2
CPT0069160003
Tumor
1.1
CPT0081880003
Tumor
0.7
CPT0088690003
Tumor
0.7
CPT0012370003
Tumor
0.5
CPT0065430003
Tumor
0.5
CPT0001180009
Tumor
0.5
CPT0014450004
Tumor
0.5
CPT0001260009
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0086950003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0011240003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0007320003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0014160003
Tumor
0.4
CPT0015910003
Tumor
0.4
CPT0000640003
Tumor
0.4
CPT0092730003
Tumor
0.4
CPT0066470004
Tumor
0.4
CPT0065870003
Tumor
0.4
CPT0069000003
Tumor
0.3
CPT0065690003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0019130003
Tumor
0.3
CPT0075560003
Tumor
0.3
CPT0015810003
Tumor
0.3
CPT0088760003
Tumor
0.3
CPT0071150004
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0077110003
Tumor
0.3
CPT0025350003
Tumor
0.3
CPT0064370003
Tumor
0.3
CPT0081990003
Tumor
0.3
CPT0089020003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0010160003
Tumor
0.3
CPT0006900003
Tumor
0.3
CPT0084560003
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0025290003
Tumor
0.3
CPT0012670003
Tumor
0.2
CPT0019990003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0012900004
Tumor
0.2
CPT0014370004
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0017850003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0021240003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0077310003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0063630003
Tumor
0.2
CPT0078990003
Tumor
0.1
CPT0009000003
Tumor
0.1
CPT0001500009
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0018250001
Normal
0.1
CPT0001270001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0075720003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0001540009
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0010120001
Normal
0.1
CPT0088480003
Tumor
0.1
CPT0079230003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0085670003
Tumor
0.1
CPT0086820003
Tumor
0.1
CPT0077320001
Normal
0.1
CPT0092800003
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0079270003
Tumor
0.0
CPT0025230003
Tumor
0.0
CPT0017410003
Tumor
0.0
CPT0086360003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0012290003
Normal
0.0
CPT0023360001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0014350001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0012570003
Normal
0.0
CPT0013790003
Normal
0.0
CPT0012920003
Normal
0.0
CPT0012080003
Tumor
0.0
CPT0087040003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0088550004
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0014130001
Normal
0.0
CPT0011410003
Tumor
0.0
CPT0079480003
Tumor
0.0
CPT0026410003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0015730003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0076350001
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0009080003
Normal
-0.1
CPT0078510003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0025610001
Normal
-0.1
CPT0017450001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0007860003
Tumor
-0.1
CPT0065750003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0092190003
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0079430001
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0084590001
Normal
-0.1
CPT0024670003
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0078530001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0012770003
Normal
-0.2
CPT0010170001
Normal
-0.2
CPT0006730001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0025880003
Tumor
-0.2
CPT0002370001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0001350001
Normal
-0.2
CPT0089040001
Normal
-0.2
CPT0087050003
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0086370003
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0079510001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0012180003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0078660003
Tumor
-0.2
CPT0077500001
Normal
-0.2
CPT0014470001
Normal
-0.2
CPT0066520001
Normal
-0.2
CPT0026420001
Normal
-0.3
CPT0001510001
Normal
-0.3
CPT0069010001
Normal
-0.3
CPT0082010001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0001190001
Normal
-0.3
CPT0001230001
Normal
-0.3
CPT0025920001
Normal
-0.3
CPT0079300001
Normal
-0.3
CPT0088640003
Normal
-0.3
CPT0088970003
Tumor
-0.4
CPT0012640003
Normal
-0.4
CPT0069190001
Normal
-0.4
CPT0063330001
Normal
-0.5
CPT0002270011
Tumor
-0.6
CPT0079180003
Tumor
-0.7
CPT0078800003
Tumor
-0.7
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
