HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:72.2 nTPM
HPA Brain:123.6 nTPM
GTEx:72.2 nTPM
FANTOM5:138.5 Scaled Tags Per Million
Pig:134.2 nTPM
Mouse:22.1 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 123.6
Sample id Sample description nTPM
Hippocampus
nTPM: 82.9
1911 Female, age 85, right hemisphere 105.0
2529 Female, age 94, left hemisphere 104.0
2621 Female, age 67, right hemisphere 76.5
1898 Male, age 80, left hemisphere 73.9
1855 Male, age 76, left hemisphere 72.0
2148 Female, age 91, left hemisphere 66.1
Dentate gyrus
nTPM: 79.6
2530 Female, age 94, left hemisphere 130.8
2528 Male, age 74, both hemispheres 91.2
2010 Male, age 76, both hemispheres 82.1
2246 Female, age 85, both hemispheres 72.9
2531 Female, age 67, both hemispheres 54.4
1927 Female, age 91, both hemispheres 46.4
Entorhinal gyrus
nTPM: 89.4
2117 Female, age 91, right hemisphere 140.4
2764 Male, age 80, right hemisphere 116.6
1938 Female, age 85, left hemisphere 77.3
1787 Male, age 76, left hemisphere 69.9
2613 Female, age 94, left hemisphere 66.3
2686 Male, age 75, right hemisphere 65.7
Hippocampus, CA1
nTPM: 65.6
2527 Male, age 74, both hemispheres 84.9
2082 Female, age 91, right hemisphere 82.8
1873 Female, age 85, both hemispheres 74.2
2749 Male, age 80, left hemisphere 52.7
2045 Male, age 76, both hemispheres 33.2
Hippocampus, CA2
nTPM: 84.3
1963 Male, age 80, left hemisphere 105.3
2249 Male, age 74, both hemispheres 99.1
2113 Female, age 91, right hemisphere 88.2
2437 Female, age 94, left hemisphere 85.7
1940 Female, age 85, left hemisphere 80.0
1892 Male, age 76, both hemispheres 47.3
Hippocampus, CA3
nTPM: 60.1
1891 Female, age 85, both hemispheres 122.6
1867 Male, age 76, both hemispheres 68.6
2436 Male, age 74, both hemispheres 63.7
2620 Female, age 94, left hemisphere 36.8
2137 Male, age 80, left hemisphere 36.7
2861 Female, age 67, both hemispheres 32.3
Parahippocampal cortex
nTPM: 69.8
2692 Male, age 74, both hemispheres 106.3
2532 Female, age 72, left hemisphere 97.8
1990 Female, age 91, right hemisphere 90.1
1850 Male, age 80, both hemispheres 70.5
2018 Male, age 76, both hemispheres 68.6
1933 Female, age 85, both hemispheres 65.1
2245 Female, age 91, both hemispheres 62.4
2693 Female, age 94, both hemispheres 50.8
2250 Female, age 67, right hemisphere 50.6
2622 Female, age 67, right hemisphere 36.2
Perirhinal gyrus
nTPM: 45.7
1794 Male, age 80, right hemisphere 50.0
2521 Female, age 94, right hemisphere 49.4
2848 Male, age 76, right hemisphere 48.1
1847 Female, age 91, left hemisphere 43.3
1841 Female, age 85, right hemisphere 37.8
Subiculum
nTPM: 123.6
2042 Male, age 76, both hemispheres 174.4
1901 Male, age 80, both hemispheres 137.2
2438 Female, age 94, left hemisphere 125.6
1977 Female, age 85, both hemispheres 117.9
2619 Male, age 74, both hemispheres 101.3
2729 Female, age 91, right hemisphere 85.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 72.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.2
Samples: 197

Max nTPM: 291.1
Min nTPM: 11.8
Std nTPM: 48.5
Median nTPM: 56.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 291.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 252.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 238.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 222.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 208.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 198.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 192.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 190.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 181.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 180.9
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 166.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 138.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 138.5
FF:10153-102I9 76 years, female 163.8
FF:10169-103B7 60 years, female 113.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 134.2
Pig sample Sample description nTPM
Subiculum
nTPM: 74.6
Samples: 4

Max nTPM: 83.5
Min nTPM: 71.3
Sample A Female 71.7
Sample B Female 83.5
Sample C Male 71.3
Sample D Male 71.9
Dorsal hippocampus
nTPM: 134.2
Samples: 4

Max nTPM: 191.8
Min nTPM: 54.2
Sample A Female 191.8
Sample B Female 99.8
Sample C Male 190.8
Sample D Male 54.2
Entorhinal cortex
nTPM: 55.8
Samples: 4

Max nTPM: 60.9
Min nTPM: 45.0
Sample A Female 60.9
Sample B Female 57.7
Sample C Male 45.0
Sample D Male 59.6
Ventral hippocampus
nTPM: 108.8
Samples: 4

Max nTPM: 135.0
Min nTPM: 65.7
Sample A Female 135.0
Sample B Female 65.7
Sample C Male 107.6
Sample D Male 126.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 22.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 17.0
Min nTPM: 6.6
Sample A Male 17.0
Sample B Male 12.0
Sample C Female 9.4
Sample D Female 6.6
Hippocampal formation
nTPM: 22.1
Samples: 4

Max nTPM: 31.3
Min nTPM: 15.0
Sample A Male 15.0
Sample B Male 21.4
Sample C Female 31.3
Sample D Female 20.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
70946147 Antisense, RP_050310_01_D11, Mouse strain C57BL/6J (56 days, male) 2.2

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