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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
47.0
nTPM
HPA Brain:
105.7
nTPM
GTEx:
47.0
nTPM
FANTOM5:
117.6
Scaled Tags Per Million
Pig:
95.9
nTPM
Mouse:
9.9
nTPM
Allen mouse:
1.7
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
105.7
Sample id
Sample description
nTPM
Amygdala nTPM: 101.6
2814
Male, age 76, right hemisphere
141.1
2514
Male, age 75, right hemisphere
104.6
2695
Female, age 67, right hemisphere
93.6
2517
Female, age 94, left hemisphere
92.4
1987
Female, age 91, left hemisphere
76.4
Basal amygdala nTPM: 85.7
2685
Female, age 94, left hemisphere
97.5
2827
Female, age 67, right hemisphere
95.3
2609
Male, age 75, right hemisphere
92.0
1955
Male, age 76, both hemispheres
91.0
2110
Male, age 80, left hemisphere
82.0
2243
Female, age 91, right hemisphere
56.5
Central amygdala nTPM: 93.4
1905
Male, age 76, both hemispheres
117.5
2701
Female, age 91, right hemisphere
93.8
2515
Male, age 75, right hemisphere
90.1
2239
Male, age 80, left hemisphere
88.4
2826
Female, age 94, left hemisphere
77.1
Corticomedial amygdala nTPM: 68.6
2428
Male, age 75, right hemisphere
93.4
2429
Female, age 94, left hemisphere
84.0
2240
Male, age 76, both hemispheres
73.2
2535
Female, age 67, right hemisphere
64.8
2829
Male, age 80, left hemisphere
53.5
2242
Female, age 91, right hemisphere
42.4
Lateral amygdala nTPM: 105.7
2830
Female, age 67, right hemisphere
124.1
1883
Male, age 76, both hemispheres
111.8
2516
Male, age 75, right hemisphere
110.6
2256
Male, age 80, left hemisphere
103.3
2255
Female, age 91, right hemisphere
95.2
2534
Female, age 94, left hemisphere
89.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 47.0
Samples: 152
Max nTPM: 138.4
Min nTPM: 12.0
Std nTPM: 22.0
Median nTPM: 43.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
138.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
130.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
111.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
104.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
99.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
97.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
91.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
91.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
90.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
86.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
86.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
83.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
81.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
79.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
77.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
77.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
76.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
71.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
69.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
69.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
69.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
68.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
68.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
65.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
64.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
62.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
62.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
61.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
60.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
60.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
58.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
58.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
57.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
56.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
56.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
55.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
55.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
55.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
55.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
54.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
54.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
54.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
54.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
54.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
54.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
53.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
52.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
52.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
52.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
50.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
50.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
49.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
49.8
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
49.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
49.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
49.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
48.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
48.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
48.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
48.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
48.1
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
48.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
47.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
46.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
46.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
46.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
46.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
46.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
45.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
45.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
44.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
44.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
44.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
44.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
44.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
44.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
43.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
43.2
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
42.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
42.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
42.3
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
42.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
41.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
41.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
40.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
40.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
39.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
39.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
39.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
39.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
38.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
38.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
38.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
37.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
36.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
36.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
36.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
36.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
36.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
36.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
35.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
35.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
34.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
34.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
34.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
34.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
34.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
33.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
33.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
33.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
33.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
33.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
33.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
32.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
32.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
31.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
31.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
31.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
30.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
30.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
29.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
29.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
29.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
29.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
28.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
28.2
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
28.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
27.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
27.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
27.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
26.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
26.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
26.1
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
23.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
22.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
22.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
22.3
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
22.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
22.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
22.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
21.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
21.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
21.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
20.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
20.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
20.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
19.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
16.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
16.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
13.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
13.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
12.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
9.9
Mouse sample
Sample description
nTPM
Amygdala nTPM: 9.9
Samples: 4
Max nTPM: 14.6
Min nTPM: 8.0
Sample A
Male
9.0
Sample B
Male
8.0
Sample C
Female
14.6
Sample D
Female
8.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.