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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMC6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
5.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
41.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
19.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
17.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
15.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
12.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
11.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.6
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.5
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
7.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
7.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
6.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
6.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
6.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
6.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
6.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
5.6
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
5.4
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
5.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
5.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
4.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
4.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
4.4
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
3.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
3.8
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
3.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
3.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
3.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
2.6
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
2.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
2.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
2.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
2.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.0
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
2.0
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
1.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
1.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
1.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.8
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.5
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.3
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMC6 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.0
Number of samples
521
Samples
Sample
Description
TPM
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
37.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
37.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
34.2
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
33.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
32.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
31.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
31.8
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
30.3
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
30.2
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
28.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
28.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
27.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
27.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
27.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
27.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
27.0
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
26.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
26.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
25.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
24.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
24.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
24.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
24.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
24.0
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
23.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.4
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
23.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
23.4
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
23.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
22.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
22.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
22.5
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
22.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
22.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
21.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
21.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
21.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
21.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
21.1
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
20.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
20.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
20.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
20.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
20.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
19.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
19.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
19.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
19.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
19.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
18.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
18.8
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
18.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
18.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
18.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
18.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
18.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
18.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
18.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
18.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
18.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
17.9
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
17.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
17.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
17.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
17.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
17.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.3
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
17.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
17.1
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
17.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
17.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
17.0
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
17.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
16.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
16.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
16.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.8
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
16.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
16.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
16.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.7
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
16.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
16.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
16.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
16.6
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
16.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
16.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
16.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
16.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
16.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
16.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
16.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
16.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
16.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
16.0
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
15.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
15.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
15.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
15.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
15.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
15.6
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
15.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
15.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
15.2
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
15.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
15.1
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
15.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
15.0
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
15.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
14.9
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
14.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
14.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
14.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
14.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
14.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
14.4
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
14.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
14.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
14.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
14.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
14.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.0
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
14.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
14.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
14.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
13.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
13.9
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
13.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
13.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
13.6
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
13.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.6
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
13.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
13.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
13.5
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
13.5
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
13.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
13.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.3
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
13.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
13.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
13.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
13.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
13.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
13.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
13.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
13.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
13.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
13.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
12.9
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
12.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
12.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
12.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
12.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
12.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
12.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
12.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
12.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
12.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
12.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
12.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
12.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
12.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.5
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
12.5
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
12.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
12.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
12.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
12.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
12.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
12.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
12.3
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
12.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
12.2
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
12.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
12.0
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
12.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
12.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
12.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
11.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
11.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
11.9
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
11.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
11.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
11.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
11.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
11.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
11.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.8
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
11.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
11.7
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
11.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
11.7
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
11.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
11.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
11.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
11.5
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
11.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.5
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
11.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
11.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.4
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
11.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
11.4
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
11.4
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
11.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
11.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
11.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
11.2
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
11.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
11.2
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
11.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
11.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
11.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
11.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.0
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
11.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
11.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
11.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
10.9
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
10.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
10.8
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
10.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
10.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
10.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
10.5
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
10.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
10.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
10.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.5
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
10.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
10.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
10.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
10.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
10.2
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
10.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
10.2
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
10.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
10.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
10.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
10.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
10.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
10.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
10.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
10.0
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
10.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
10.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
9.9
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
9.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
9.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.9
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
9.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.8
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
9.8
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
9.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
9.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.7
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
9.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
9.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
9.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
9.6
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
9.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
9.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
9.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
9.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
9.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
9.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
9.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
9.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
9.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
9.1
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.1
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
9.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
9.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
9.1
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
9.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
9.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
9.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
9.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.0
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
9.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
8.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
8.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
8.8
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
8.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
8.8
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
8.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.7
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
8.7
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
8.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
8.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
8.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
8.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
8.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
8.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
8.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
8.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
8.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.3
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
8.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
8.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
8.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
8.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
8.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
8.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
8.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
8.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
8.1
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
8.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
7.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
7.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.9
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
7.9
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
7.9
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
7.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
7.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
7.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
7.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
7.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
7.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
7.6
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
7.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
7.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
7.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
7.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
7.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
7.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
7.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
7.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
7.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
7.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
7.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
7.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
7.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
7.2
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
7.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
7.1
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
7.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
6.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
6.9
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
6.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
6.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
6.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
6.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
6.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
6.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
6.7
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.7
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
6.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
6.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
6.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
6.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
6.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
6.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
6.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
6.3
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
6.3
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
6.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
6.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.2
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.2
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
6.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
6.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
6.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
6.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
5.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
5.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
5.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
5.8
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
5.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
5.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
5.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
5.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
5.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
5.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
5.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
5.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
5.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
5.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
5.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
5.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
5.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
4.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
4.9
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
4.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
4.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
4.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
4.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
4.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
4.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
4.3
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
4.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
4.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
4.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.0
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
4.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
3.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
3.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
3.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.5
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
3.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
3.2
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
3.1
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
3.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
3.0
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
3.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.6
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
2.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
2.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
1.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.5
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
0.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMC6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
42.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
39.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
36.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
34.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
33.4
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
33.0
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
32.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
31.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
29.5
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
29.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
29.0
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
27.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
27.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
26.8
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
26.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
26.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
25.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
25.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
24.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.8
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
22.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
22.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
22.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
21.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
21.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
20.8
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
19.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
19.1
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
18.9
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
18.6
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
18.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
17.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
17.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
17.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
17.3
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
17.1
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
16.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
16.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
15.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
15.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
15.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
14.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
14.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
14.5
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
14.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.9
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
13.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
13.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
13.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
13.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.3
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
13.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
13.0
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
12.5
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
12.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
12.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
11.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
11.9
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
11.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
11.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
11.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
11.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
10.7
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
10.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
10.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
10.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
9.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
9.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
9.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
9.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
9.2
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
8.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.0
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
7.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
7.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
7.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
7.2
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
6.9
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
6.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
5.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
4.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
4.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
3.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TMC6 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
86.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
73.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
67.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
65.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
64.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
60.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
57.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
51.8
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
51.7
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
50.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
48.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
48.1
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
44.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
44.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
43.9
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
41.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
41.4
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
41.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
40.8
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
39.5
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
38.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
38.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
38.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
37.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
37.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
37.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
36.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
36.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
36.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
35.9
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
35.7
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
35.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
35.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
34.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
34.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
34.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
34.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
33.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
33.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
33.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
33.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
32.8
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
31.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
31.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
31.3
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
31.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
31.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
30.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
30.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
30.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
29.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
29.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
29.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
29.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
29.1
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
28.8
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
28.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
28.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
28.5
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
28.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
27.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
27.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
27.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
27.3
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
27.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
26.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
26.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
26.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
26.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
26.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
26.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
25.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
25.9
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
25.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
25.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
25.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
24.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
24.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
24.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
24.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
23.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
23.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
23.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
23.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
23.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
23.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
23.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
23.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
23.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
22.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
22.6
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
22.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.5
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
22.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
22.3
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
21.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
21.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
21.7
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
21.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
21.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
21.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
20.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
20.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
20.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
20.4
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
20.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
19.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
19.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
19.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.4
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
19.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
18.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
18.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
18.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
18.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
18.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
18.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
18.1
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
17.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
17.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
17.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
17.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
17.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
17.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
16.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
16.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
16.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
16.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
16.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
15.8
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
15.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
15.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
15.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
15.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
15.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
15.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
15.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
15.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
15.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
14.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
14.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
14.2
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
13.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
13.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
13.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
13.6
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
13.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
13.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
13.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
13.2
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
12.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
12.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
12.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
12.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
12.2
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
12.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.1
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
12.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
11.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
11.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
11.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
11.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
11.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
11.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
11.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
11.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
11.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
10.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
10.9
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
10.8
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
10.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
10.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
10.6
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
10.5
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
10.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
10.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
10.2
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
10.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
9.9
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
9.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
9.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
9.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
9.5
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
9.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
9.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
8.8
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.7
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
8.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
8.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
8.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
8.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
8.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
8.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
8.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
8.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
7.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
7.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.8
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
7.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
7.7
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
7.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
7.4
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
7.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
7.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
7.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
7.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
6.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
6.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
6.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
6.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
6.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
6.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
5.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
5.7
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
5.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
5.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
5.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
5.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
5.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
4.7
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
4.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
4.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
4.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
4.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
4.2
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
4.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
4.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
3.9
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.9
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
3.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
3.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
3.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
3.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
3.1
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
2.8
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
2.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
2.7
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
2.7
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
2.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
2.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
2.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
2.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
1.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
1.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0081880003
Tumor
0.9
CPT0010170001
Normal
0.8
CPT0010120001
Normal
0.8
CPT0025290003
Tumor
0.8
CPT0086970003
Normal
0.8
CPT0065930003
Tumor
0.7
CPT0064400001
Normal
0.6
CPT0025170003
Tumor
0.6
CPT0065690003
Tumor
0.5
CPT0007320003
Tumor
0.4
CPT0081620001
Normal
0.3
CPT0065750003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0023690003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0012180003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0006950001
Normal
0.0
CPT0075560003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0086030003
Tumor
0.0
CPT0025230003
Tumor
-0.1
CPT0084590001
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0069010001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0086820003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0012670003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0025110003
Tumor
-0.1
CPT0075720003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0084560003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0077500001
Normal
-0.2
CPT0065870003
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0011410003
Tumor
-0.2
CPT0017850003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0079230003
Tumor
-0.3
CPT0025580004
Tumor
-0.3
CPT0006900003
Tumor
-0.5
CPT0086830003
Normal
-0.5
CPT0015810003
Tumor
-0.6
CPT0015730003
Tumor
-0.6
CPT0010110003
Tumor
-0.6
CPT0012290003
Normal
-0.7
CPT0064370003
Tumor
-0.8
CPT0018250001
Normal
-0.9
CPT0012090003
Normal
-1.0
CPT0010160003
Tumor
-1.0
CPT0078800003
Tumor
-1.0
CPT0092160003
Tumor
-1.1
CPT0092190003
Normal
-1.1
CPT0086950003
Tumor
-1.4
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0077140001
Normal
N/A
CPT0025050003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0001340003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0024680001
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0012370003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0013790003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
