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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TP53 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
52.7
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
34.8
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
33.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
30.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
30.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
28.3
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
26.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
26.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
26.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
22.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
22.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
21.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
20.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
20.1
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
18.4
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
18.4
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
18.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
16.9
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
14.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
14.5
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
14.4
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
12.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
11.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
11.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
10.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
10.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
10.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
9.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
9.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
7.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
7.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
7.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
6.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
4.3
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
4.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
4.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.9
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
3.5
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
3.1
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
2.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TP53 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.4
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
54.6
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
52.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
50.9
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
48.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
46.9
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
46.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
46.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
45.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
44.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
44.7
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
44.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
43.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
42.7
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
42.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
42.0
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
41.6
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
41.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
41.3
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
41.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
41.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
40.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
40.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
40.8
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
40.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
40.3
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
39.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
39.4
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
39.4
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
39.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
39.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
39.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
39.0
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
38.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
38.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
38.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
38.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
38.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
38.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
38.5
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
38.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
38.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
38.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
37.9
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
37.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
37.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
37.0
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
36.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
36.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
36.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
36.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
36.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
36.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
36.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
36.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
36.1
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
35.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
35.7
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
35.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
35.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
35.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
35.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
35.3
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
35.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
35.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
34.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
34.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
34.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
34.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
34.7
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
34.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
34.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
34.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
34.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
34.6
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
34.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
34.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
34.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
34.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
34.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
34.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
34.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
34.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
34.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
34.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
34.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
34.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
34.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
33.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
33.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
33.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
33.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
33.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
33.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
33.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
33.6
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
33.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
33.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
33.3
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
33.3
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
33.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
33.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
32.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
32.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
32.3
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
32.2
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
32.2
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
32.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
32.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
32.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
32.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
32.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
31.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
31.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
31.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
31.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
31.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
31.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
31.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
31.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
31.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
31.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
31.5
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
31.3
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
31.2
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
31.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
31.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
30.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
30.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
30.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
30.8
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
30.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
30.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
30.6
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
30.6
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
30.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
30.4
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
30.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
30.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
30.3
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
30.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
30.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
30.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
30.1
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
30.0
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
30.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
29.9
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
29.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
29.8
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
29.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
29.8
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
29.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
29.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
29.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
29.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
29.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
29.4
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
29.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
29.3
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
29.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
29.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
29.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
29.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
29.1
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
29.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
29.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
29.0
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
29.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
28.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
28.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
28.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
28.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
28.7
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
28.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
28.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
28.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
28.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
28.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
28.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
28.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
28.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
28.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
28.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
28.3
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
28.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
28.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
28.2
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
28.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
28.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
28.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
27.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
27.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
27.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
27.8
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
27.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
27.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
27.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
27.8
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
27.8
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
27.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
27.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
27.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
27.7
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
27.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
27.6
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
27.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
27.6
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
27.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
27.5
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
27.4
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
27.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
27.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
27.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
27.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
27.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
27.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
27.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
27.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
27.2
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
27.2
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
27.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
26.9
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
26.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
26.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
26.8
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
26.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
26.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
26.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
26.6
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
26.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
26.5
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
26.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
26.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
26.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
26.3
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
26.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
26.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
26.2
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
26.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
26.1
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
26.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
26.1
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
26.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
26.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
26.0
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
26.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
26.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.0
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
26.0
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
26.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
26.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
25.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
25.8
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
25.7
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
25.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
25.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.5
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
25.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
25.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
25.4
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
25.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
25.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
25.3
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
25.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
25.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
25.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
25.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
25.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
25.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
25.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
24.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
24.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
24.8
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
24.7
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
24.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
24.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
24.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
24.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
24.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
24.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
24.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
24.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
24.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
24.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
24.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
24.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
24.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
24.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
24.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
24.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
24.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
24.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
24.0
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
23.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
23.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
23.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
23.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
23.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
23.8
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
23.8
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
23.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
23.8
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
23.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
23.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
23.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
23.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
23.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
23.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
23.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
23.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
23.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
23.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
23.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
23.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
23.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
23.1
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
23.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
23.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
23.0
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
23.0
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
23.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
22.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
22.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
22.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
22.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
22.7
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
22.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.6
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
22.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
22.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
22.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
22.4
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
22.4
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
22.3
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
22.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
22.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.0
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
22.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
22.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
21.8
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
21.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
21.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
21.7
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
21.7
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
21.5
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
21.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
21.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
21.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
21.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
21.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
21.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
21.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
21.1
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
21.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
21.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
21.0
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.0
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
20.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
20.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
20.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
20.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
20.7
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
20.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
20.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
20.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.5
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
20.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
20.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
20.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
20.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
20.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
20.2
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
20.1
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
20.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
20.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
20.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.0
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
20.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
19.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
19.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
19.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
19.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
19.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
19.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
19.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
19.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
19.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
19.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
19.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
19.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
19.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
19.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
19.0
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
18.9
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
18.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
18.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
18.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
18.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
18.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
18.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
18.3
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
18.3
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
18.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
18.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
18.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
18.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
18.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
18.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
18.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
18.0
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
18.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
18.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
17.7
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
17.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
17.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
17.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
17.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
17.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
17.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
17.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
17.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
16.9
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
16.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
16.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.6
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
16.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
16.4
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.3
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
16.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
16.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
16.1
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
15.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
15.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
15.7
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
15.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
15.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
15.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.0
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
14.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
14.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
14.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
14.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
14.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
14.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
14.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
13.8
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
13.4
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
13.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
13.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
13.1
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
12.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.6
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
11.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
11.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
11.2
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.8
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
10.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
10.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
9.8
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
9.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
8.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
8.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
7.3
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.0
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
6.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
5.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
4.4
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
4.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
4.2
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TP53 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
113.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
46.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
45.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
43.7
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
41.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
36.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
36.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
33.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
33.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
33.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
33.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
32.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
31.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
31.6
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
30.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
28.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
28.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
28.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
28.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
28.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
28.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
27.5
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
27.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
27.2
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
27.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
26.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
26.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
26.0
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
25.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
25.2
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
24.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
24.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
24.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
24.6
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
24.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
24.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
24.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
24.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
24.2
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
24.0
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.8
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
23.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.1
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
23.0
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
22.4
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
22.3
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
22.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
22.2
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
22.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
22.0
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
21.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
21.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
21.6
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
21.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
21.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
21.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
21.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
21.1
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
20.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
20.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
20.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
20.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.3
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
19.6
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
19.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
19.1
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
19.1
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
18.9
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
18.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
18.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
18.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
18.3
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
18.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
17.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
17.8
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
17.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
17.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
17.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
16.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
15.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
15.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
12.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
11.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
11.7
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
10.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.1
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
8.8
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
8.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
8.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TP53 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
33.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
107.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
101.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
97.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
83.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
80.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
80.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
79.2
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
79.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
78.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
78.2
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
76.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
73.5
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
72.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
71.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
70.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
69.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
69.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
69.2
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
67.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
66.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
61.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
61.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
60.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
60.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
59.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
59.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
58.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
57.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
56.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
55.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
55.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
53.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
51.7
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
51.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
51.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
50.7
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
50.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
49.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
48.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
47.6
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
47.5
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
47.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
47.1
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
46.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
45.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
45.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
45.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
45.1
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
44.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
44.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
44.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
44.1
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
44.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
44.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
44.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
43.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
43.6
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
43.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
43.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
42.9
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
42.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
42.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
41.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
41.7
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
41.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
41.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
41.2
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
40.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
40.2
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
40.2
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
40.1
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
40.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
40.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
39.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
39.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
39.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
39.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
39.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
39.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
38.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
38.4
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
38.2
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
38.1
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
37.9
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
37.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
37.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
37.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
37.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
37.5
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
37.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
37.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
37.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
37.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
37.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
36.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
36.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
36.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
36.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
35.8
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
35.4
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
35.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
35.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
34.6
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
34.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
34.5
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
34.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
34.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
34.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
34.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
34.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
33.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
33.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
33.5
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
33.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
33.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
33.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
33.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
33.1
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
33.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
32.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
32.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
32.5
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
32.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
32.1
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
31.9
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
31.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
31.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
31.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
31.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
31.0
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
31.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
30.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
30.8
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
30.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
30.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
30.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
30.5
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
30.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
30.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
30.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
30.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
29.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
29.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
29.6
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
29.6
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
29.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
29.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
29.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
29.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
29.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
28.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
28.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
28.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
28.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
28.3
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
28.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
27.7
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
27.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
27.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
27.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
27.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
27.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
27.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
27.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
26.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
26.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
26.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
26.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
26.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
26.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
25.9
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
25.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
25.7
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
25.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
25.4
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
25.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
25.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
25.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
25.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
25.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
25.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
24.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
24.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
24.8
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
24.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
24.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
24.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
24.5
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
24.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
24.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
24.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
24.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
24.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
24.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
23.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
23.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
23.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
23.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
23.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
23.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
22.8
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
22.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
22.7
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
22.7
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
22.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
22.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
22.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
22.6
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
22.5
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
22.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
21.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
21.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
21.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
21.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
20.9
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
20.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
20.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
20.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
20.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
20.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
20.4
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
20.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
20.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
19.5
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
19.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
19.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
18.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
18.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
18.7
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
18.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
18.3
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
18.1
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
18.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
18.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
17.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
17.4
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.3
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
17.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
16.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.4
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
16.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
16.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
16.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
16.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
15.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
15.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
14.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
14.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
13.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
13.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
13.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
12.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
12.9
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
12.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.1
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
12.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
11.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
11.0
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
11.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.2
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.4
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
7.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
5.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
5.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.7
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0079180003
Tumor
1.5
CPT0012370003
Tumor
0.9
CPT0092790003
Tumor
0.6
CPT0089460004
Tumor
0.5
CPT0078930003
Tumor
0.4
CPT0023690003
Tumor
0.4
CPT0063630003
Tumor
0.4
CPT0088690003
Tumor
0.3
CPT0075560003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0012550003
Tumor
0.2
CPT0025580004
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0006950001
Normal
0.1
CPT0081620001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0002350011
Tumor
0.1
CPT0065810003
Tumor
0.0
CPT0077490003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0025610001
Normal
0.0
CPT0078830003
Tumor
-0.1
CPT0002370001
Normal
-0.1
CPT0010110003
Tumor
-0.1
CPT0089480003
Normal
-0.1
CPT0078940001
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0013790003
Normal
-0.1
CPT0088780001
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0023710001
Normal
-0.2
CPT0078840001
Normal
-0.2
CPT0001510001
Normal
-0.2
CPT0088760003
Tumor
-0.2
CPT0000660001
Normal
-0.2
CPT0088630003
Tumor
-0.2
CPT0086370003
Normal
-0.3
CPT0092800003
Normal
-0.3
CPT0001500009
Tumor
-0.3
CPT0077500001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0065820001
Normal
-0.3
CPT0011240003
Tumor
-0.3
CPT0000640003
Tumor
-0.4
CPT0012570003
Normal
-0.5
CPT0075570001
Normal
-0.6
CPT0024670003
Tumor
-0.7
CPT0012770003
Normal
-1.0
CPT0024680001
Normal
-1.4
CPT0026410003
Tumor
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0069160003
Tumor
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0069000003
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0007320003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0065870003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
