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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TP53 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
69.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
62.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
61.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
60.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
51.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
48.3
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
43.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
41.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
40.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
39.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
38.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
37.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
37.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
36.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
35.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
34.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
33.3
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
33.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
31.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
31.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
31.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
31.2
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
31.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
31.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
30.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
30.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
29.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
29.0
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
28.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
28.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
28.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
28.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
27.8
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
27.8
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
27.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
27.3
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
26.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
26.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
26.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
25.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
25.9
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
25.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
25.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
25.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
25.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
24.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
24.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
24.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
24.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
24.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
24.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
23.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
22.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
22.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
22.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
21.9
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
21.9
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
20.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
20.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
20.7
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
20.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
20.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
20.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
20.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
20.3
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
20.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
20.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
20.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
19.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
19.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
19.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
19.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
19.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
19.4
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
19.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
19.4
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
19.3
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
19.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
19.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
19.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
18.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
18.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
18.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
18.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
18.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
18.6
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
18.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
18.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
18.4
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
18.3
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
18.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
18.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
18.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
17.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
17.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
17.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
17.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
17.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
17.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
17.2
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
17.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
17.0
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
16.9
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
16.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
16.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
16.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
16.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
16.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
16.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
16.0
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
16.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
15.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
15.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
15.8
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
15.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
15.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
15.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
15.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
15.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
15.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
14.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
14.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
14.6
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
14.5
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
14.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
14.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
14.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
14.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
14.2
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
14.1
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
14.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
13.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
13.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
13.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
13.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
13.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
13.5
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
13.4
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
13.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
13.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
13.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
13.1
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
13.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
13.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
12.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
12.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
12.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
12.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
12.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
12.7
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
12.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
12.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
12.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
12.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
12.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
12.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
12.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
12.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
12.4
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
12.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
12.3
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
12.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
12.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
12.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
12.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
12.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
12.1
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
11.9
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
11.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
11.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
11.7
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
11.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
11.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
11.4
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
11.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
11.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
11.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
11.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
11.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
11.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
11.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
11.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
11.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
11.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
10.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
10.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
10.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
10.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
10.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
10.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
10.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
10.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
10.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
10.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
10.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
10.3
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
10.2
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
10.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
10.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
10.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
10.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
9.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
9.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
9.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.4
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
9.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
9.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
9.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
9.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
9.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
9.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
9.3
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
9.2
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
9.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
9.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
9.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
9.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
9.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
8.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
8.9
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
8.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
8.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
8.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
8.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
8.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
8.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
8.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
8.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
8.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
8.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
8.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
8.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
8.1
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
8.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
8.0
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
8.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
8.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
7.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
7.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
7.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
7.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
7.7
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
7.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.6
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
7.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
7.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
7.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.4
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
7.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
7.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
7.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
7.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
7.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
7.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
7.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
7.0
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
7.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
7.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
6.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.8
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
6.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
6.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
6.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.5
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
6.4
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
6.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
6.3
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
6.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
6.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
5.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
5.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
5.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
5.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
5.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
5.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
5.5
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
5.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.4
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
5.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
4.9
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
4.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
4.5
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
4.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
4.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
4.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
4.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
4.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
4.1
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
3.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
3.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
3.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
3.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
3.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.4
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
3.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
3.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
3.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
3.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
2.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
2.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
2.6
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
2.5
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
2.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
2.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
2.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
2.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1.8
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1.7
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
1.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1.4
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
1.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
1.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1.1
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TP53 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.5
Number of samples
231
Samples
Sample
Description
TPM
DO45305
0 years, male, NA, stage:4, alive, 300 days
37.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
35.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
31.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
28.6
DO23526
0 years, male, NA, stage:3, alive, 1050 days
27.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
27.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
26.2
DO45249
0 years, male, NA, stage:1, alive, 630 days
24.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
24.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
23.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
22.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
22.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
22.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
22.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
22.2
DO50791
0 years, female, NA, stage:1, dead, 480 days
22.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
22.0
DO23542
0 years, male, NA, stage:3, alive, 960 days
21.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
21.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
21.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
19.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
19.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
18.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
18.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
18.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
18.1
DO23511
0 years, female, NA, stage:3, dead, 180 days
18.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
17.8
DO23515
0 years, male, NA, stage:2, alive, 1230 days
17.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
17.7
DO48697
0 years, female, NA, stage:2, dead, 810 days
17.5
DO45185
0 years, male, NA, stage:2, alive, 600 days
17.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
17.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
17.0
DO45093
0 years, male, NA, stage:2, dead, 720 days
16.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
16.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
16.7
DO50811
0 years, male, NA, stage:1, alive, 450 days
16.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
16.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
16.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
16.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
16.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
16.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
15.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
15.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
15.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
15.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
15.4
DO45231
0 years, male, NA, stage:2, alive, 930 days
15.3
DO50855
0 years, male, NA, stage:2, alive, 570 days
15.0
DO50822
0 years, male, NA, stage:2, alive, 510 days
14.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
14.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
14.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
14.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
14.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
14.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
14.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
13.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
13.5
DO45137
0 years, male, NA, stage:1, alive, 1320 days
13.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
13.1
DO45205
0 years, female, NA, stage:2, dead, 90 days
13.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
12.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
12.7
DO48715
0 years, female, NA, stage:2, dead, 690 days
12.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
12.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
12.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
12.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
12.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
12.3
DO45171
0 years, male, NA, stage:3, alive, 600 days
12.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
12.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
12.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
12.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
12.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
12.0
DO45245
0 years, female, NA, stage:2, dead, 240 days
11.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
11.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
11.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
11.7
DO45257
0 years, male, NA, stage:3, alive, 810 days
11.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
11.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
11.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
11.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
11.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
11.3
DO45239
0 years, male, NA, stage:2, alive, 870 days
11.3
DO45187
0 years, female, NA, stage:1, alive, 1260 days
11.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
11.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
10.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
10.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
10.7
DO45263
0 years, male, NA, stage:3, dead, 270 days
10.7
DO23529
0 years, male, NA, stage:4, alive, 930 days
10.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
10.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
10.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
10.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
10.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
10.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
10.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
10.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
10.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
10.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
9.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
9.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
9.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
9.9
DO23532
0 years, female, NA, stage:1, alive, 960 days
9.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
9.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
9.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
9.5
DO45207
0 years, male, NA, stage:1, alive, 1050 days
9.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
9.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
9.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
9.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
9.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
9.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
9.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
9.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
9.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
8.9
DO50813
0 years, male, NA, stage:2, alive, 420 days
8.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
8.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
8.8
DO45177
0 years, female, NA, stage:3, alive, 1260 days
8.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
8.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
8.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
8.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
8.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.4
DO48733
0 years, male, NA, stage:2, alive, 600 days
8.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
8.1
DO23524
0 years, female, NA, stage:2, alive, 1050 days
8.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
8.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
8.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
7.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
7.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
7.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
7.7
DO50778
0 years, male, NA, stage:4, alive, 630 days
7.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
7.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
7.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
7.6
DO45237
0 years, male, NA, stage:2, alive, 900 days
7.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
7.5
DO45115
0 years, male, NA, stage:2, alive, 840 days
7.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
7.4
DO50798
0 years, male, NA, stage:3, dead, 30 days
7.4
DO23546
0 years, male, NA, stage:2, alive, 1050 days
7.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
7.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
7.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
6.9
DO48716
0 years, male, NA, stage:2, alive, 720 days
6.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
6.7
DO45223
0 years, male, NA, stage:4, alive, 1020 days
6.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
6.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
6.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
6.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
6.1
DO48672
0 years, male, NA, stage:2, alive, 450 days
6.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
6.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.0
DO45097
0 years, male, NA, stage:3, alive, 1620 days
5.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
5.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
5.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
5.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
5.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
5.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
5.4
DO45092
0 years, male, NA, stage:4, dead, 1200 days
5.4
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
5.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
5.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
5.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
5.2
DO45123
0 years, female, NA, stage:2, dead, 570 days
5.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.1
DO45165
0 years, male, NA, stage:2, alive, 690 days
5.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
5.0
DO45301
0 years, male, NA, stage:2, dead, 1440 days
5.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.7
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
4.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
4.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
4.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
4.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
4.3
DO45267
0 years, male, NA, stage:3, dead, 570 days
4.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
4.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
4.1
DO45281
0 years, male, NA, stage:4, alive, 750 days
4.1
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
3.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
3.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
3.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
3.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
3.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
3.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
3.6
DO45117
0 years, female, NA, stage:2, dead, 1110 days
3.6
DO45127
0 years, male, NA, stage:3, dead, 420 days
3.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
3.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
3.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
3.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
3.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
3.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
2.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
2.8
DO23512
0 years, male, NA, stage:1, alive, 1260 days
2.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
2.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
1.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
1.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
1.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
1.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
1.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
741
Tumor
3.1
965
Tumor
2.7
217
Tumor
2.3
331
Tumor
1.9
211
Tumor
1.8
865
Tumor
1.8
351
Tumor
1.7
635
Tumor
1.6
737
Tumor
1.5
983
Tumor
1.4
1015
Tumor
1.3
727
Tumor
1.2
497
Tumor
1.1
863
Tumor
1.0
951
Tumor
0.9
343
Tumor
0.9
483
Tumor
0.8
615
Tumor
0.8
297
Tumor
0.7
413
Tumor
0.7
311
Tumor
0.7
415
Tumor
0.5
627
Tumor
0.5
481
Tumor
0.5
777
Tumor
0.5
191
Tumor
0.5
277
Tumor
0.4
221
Tumor
0.4
363
Tumor
0.4
478
Normal
0.4
411
Tumor
0.4
943
Tumor
0.3
357
Tumor
0.3
327
Tumor
0.3
866
Normal
0.3
488
Normal
0.3
341
Tumor
0.3
963
Tumor
0.2
493
Tumor
0.2
426
Normal
0.2
328
Normal
0.2
427
Tumor
0.2
482
Normal
0.1
498
Normal
0.1
955
Tumor
0.1
743
Tumor
0.1
218
Normal
0.1
222
Normal
0.0
332
Normal
0.0
213
Tumor
0.0
785
Tumor
0.0
423
Tumor
0.0
285
Tumor
0.0
937
Tumor
0.0
192
Normal
0.0
873
Tumor
0.0
356
Normal
-0.1
956
Normal
-0.1
471
Tumor
-0.1
484
Normal
-0.1
424
Normal
-0.1
412
Normal
-0.1
864
Normal
-0.1
745
Tumor
-0.1
641
Tumor
-0.1
868
Normal
-0.1
494
Normal
-0.1
491
Tumor
-0.1
422
Normal
-0.2
957
Tumor
-0.2
196
Normal
-0.2
756
Normal
-0.2
428
Normal
-0.2
461
Tumor
-0.2
416
Normal
-0.2
462
Normal
-0.2
421
Tumor
-0.2
477
Tumor
-0.2
968
Normal
-0.2
938
Normal
-0.2
874
Normal
-0.2
958
Normal
-0.3
813
Tumor
-0.3
414
Normal
-0.3
214
Normal
-0.3
862
Normal
-0.3
474
Normal
-0.3
954
Normal
-0.3
425
Tumor
-0.3
492
Normal
-0.3
355
Tumor
-0.3
472
Normal
-0.3
487
Tumor
-0.3
867
Tumor
-0.4
364
Normal
-0.4
352
Normal
-0.4
814
Normal
-0.4
224
Normal
-0.4
944
Normal
-0.4
755
Tumor
-0.4
976
Normal
-0.4
966
Normal
-0.5
284
Normal
-0.5
312
Normal
-0.5
278
Normal
-0.5
964
Normal
-0.5
313
Tumor
-0.5
314
Normal
-0.5
358
Normal
-0.5
975
Tumor
-0.5
952
Normal
-0.5
786
Normal
-0.6
746
Normal
-0.6
353
Tumor
-0.6
212
Normal
-0.6
195
Tumor
-0.6
344
Normal
-0.6
342
Normal
-0.6
473
Tumor
-0.6
861
Tumor
-0.6
617
Tumor
-0.7
984
Normal
-0.7
981
Tumor
-0.7
778
Normal
-0.8
228
Normal
-0.8
1014
Normal
-0.8
978
Normal
-0.8
354
Normal
-0.8
286
Normal
-0.8
628
Normal
-0.8
298
Normal
-0.8
982
Normal
-0.8
967
Tumor
-0.8
618
Normal
-0.8
227
Tumor
-0.9
728
Normal
-0.9
1016
Normal
-0.9
723
Tumor
-1.0
738
Normal
-1.0
744
Normal
-1.0
642
Normal
-1.1
724
Normal
-1.1
616
Normal
-1.1
283
Tumor
-1.2
977
Tumor
-1.4
953
Tumor
-1.4
1013
Tumor
-1.4
223
Tumor
-1.6
231
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
112
Tumor
N/A
113
Tumor
N/A
114
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
361
Tumor
N/A
362
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
125
Tumor
N/A
367
Tumor
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
817
Tumor
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
823
Tumor
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
713
Tumor
N/A
714
Normal
N/A
715
Tumor
N/A
716
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
722
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
857
Tumor
N/A
858
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
742
Normal
N/A
1046
Normal
N/A
1045
Tumor
N/A
513
Tumor
N/A
514
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
883
Tumor
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
533
Tumor
N/A
534
Normal
N/A
535
Tumor
N/A
536
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
663
Tumor
N/A
664
Normal
N/A
665
Tumor
N/A
545
Tumor
N/A
666
Normal
N/A
546
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
433
Tumor
N/A
554
Normal
N/A
434
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
448
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
452
Normal
N/A
573
Tumor
N/A
574
Normal
N/A
695
Tumor
N/A
696
Normal
N/A
455
Tumor
N/A
697
Tumor
N/A
456
Normal
N/A
698
Normal
N/A
463
Tumor
N/A
464
Normal
N/A
465
Tumor
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
