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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC39A6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
65.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
56.1
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
52.9
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
51.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
49.6
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
48.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
46.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
33.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
33.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
32.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
31.0
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
29.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
27.9
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
25.8
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
25.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
25.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
24.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
22.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
22.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
21.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
21.5
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
20.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
19.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
19.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
18.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
18.1
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
17.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
17.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
16.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
15.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
15.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
14.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
13.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
12.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
12.2
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
12.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
12.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
11.3
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
9.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
9.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
8.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
8.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
8.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
8.1
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.8
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
5.3
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
4.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
3.6
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.9
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC39A6 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
30.1
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
93.8
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
88.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
85.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
85.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
84.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
80.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
79.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
76.8
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
73.2
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
73.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
73.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
69.8
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
67.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
67.0
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
66.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
65.7
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
64.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
63.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
62.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
62.5
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
61.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
60.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
59.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
59.8
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
58.6
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
58.5
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
58.3
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
58.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
58.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
56.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
56.8
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
56.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
56.1
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
56.0
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
55.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
55.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
54.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
54.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
54.3
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
53.7
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
53.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
53.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
53.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
52.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
52.5
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
51.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
51.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
51.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
51.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
51.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
50.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
50.6
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
50.6
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
50.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
50.4
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
50.1
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
49.5
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
49.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
49.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
49.0
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
49.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
48.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
48.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
48.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
48.6
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
48.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
48.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
47.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
47.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
47.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
47.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
47.2
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
46.5
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
46.5
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
45.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
45.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
45.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
44.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
44.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
44.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
44.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
44.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
43.7
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
43.6
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
43.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
43.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
43.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
43.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
42.8
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
42.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
42.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
42.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
42.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
42.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
42.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
41.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
41.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
41.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
41.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
41.0
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
41.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
40.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
40.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
40.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
40.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
40.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
40.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
40.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
40.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
40.2
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
40.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
40.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
40.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
39.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
39.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
39.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
39.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
39.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
38.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
38.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
38.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
38.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
38.4
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
38.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
38.3
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
38.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
38.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
38.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
38.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
38.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
38.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
37.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
37.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
37.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
37.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
37.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
37.6
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
37.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
37.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
37.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
37.2
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
37.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
37.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
37.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
36.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
36.9
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
36.9
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
36.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
36.8
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
36.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
36.7
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
36.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
36.6
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
36.4
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
36.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
36.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
36.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
36.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
36.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
35.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
35.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
35.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
35.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
35.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
35.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
35.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
35.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
35.3
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
35.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
35.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
35.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
35.1
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
35.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
35.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
35.1
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
34.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
34.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
34.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
34.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
34.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
34.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
34.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
34.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
34.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
34.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
34.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
34.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
34.3
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
34.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
34.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
33.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
33.7
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
33.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
33.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
33.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
33.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
33.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
33.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
32.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
32.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
32.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
32.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
32.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
32.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
32.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
32.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
32.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
32.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
32.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
32.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
32.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
31.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
31.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
31.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
31.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
31.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
31.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
31.6
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
31.6
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
31.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
31.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
31.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
31.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
31.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
31.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
31.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
31.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
31.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
30.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
30.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
30.8
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
30.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
30.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.7
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
30.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
30.7
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
30.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
30.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
30.4
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
30.3
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
30.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
30.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.9
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
29.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
29.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
29.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
29.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
29.5
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
29.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
29.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
29.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
29.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
29.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
29.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.0
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
28.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
28.8
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
28.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
28.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
28.6
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
28.6
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
28.5
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
28.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
28.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
27.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
27.7
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
27.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
27.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
27.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
27.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
27.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
27.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
27.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
27.3
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
27.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
27.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
27.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
27.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
27.1
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
27.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
27.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
26.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
26.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.9
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
26.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
26.8
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
26.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
26.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.7
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
26.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
26.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
26.6
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
26.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
26.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
26.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
26.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
26.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
26.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
25.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
25.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
25.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
25.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
25.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
25.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
25.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
25.5
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
25.3
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
25.2
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
25.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
25.1
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
25.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
24.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
24.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
24.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
24.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
24.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.3
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
24.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
24.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
24.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
24.1
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
24.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
24.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
23.7
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
23.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
23.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
23.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
23.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
23.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
23.2
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
23.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
23.1
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
23.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
23.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
23.0
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
23.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
22.9
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
22.8
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
22.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.6
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
22.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
22.4
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
22.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
22.4
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
22.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
22.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
22.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
22.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
22.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.1
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
22.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
22.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
22.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
21.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
21.9
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
21.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
21.7
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
21.6
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
21.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
21.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
21.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
20.9
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
20.8
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
20.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
20.6
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
20.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
20.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
20.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
20.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
20.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
20.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
19.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
19.8
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
19.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
19.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
19.6
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
19.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
19.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
19.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
19.1
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
19.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
19.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
18.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
18.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
18.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
18.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
18.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
18.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
18.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
18.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.1
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
18.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
17.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
17.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
17.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
17.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
17.5
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
17.4
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
17.4
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
17.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
17.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
16.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
16.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
16.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
16.6
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
16.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
16.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
16.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
16.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
16.0
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
15.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
15.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
15.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
15.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
15.8
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
15.7
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
15.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
15.6
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.6
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
15.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
15.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.1
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.9
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
14.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
14.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
14.8
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.6
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
14.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
14.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
14.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
14.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
14.0
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.8
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
13.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
13.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.2
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
13.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
12.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
12.8
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
12.5
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
12.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
12.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
11.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.7
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
11.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
11.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
10.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.6
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
10.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
10.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
10.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
9.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
9.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.0
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
8.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
8.7
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
8.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.2
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
7.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.3
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
6.8
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
6.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
6.3
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.2
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
6.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
5.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
5.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
5.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
4.6
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
4.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
4.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
3.4
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
2.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2.2
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC39A6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
36.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
78.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
70.4
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
67.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
65.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
64.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
63.8
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
62.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
59.8
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
58.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
58.0
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
54.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
52.9
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
52.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
51.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
50.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
48.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
48.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
47.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
47.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
47.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
46.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
46.7
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
46.6
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
46.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
46.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
46.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
45.7
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
45.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
43.4
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
43.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
42.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
41.9
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
41.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
41.8
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
41.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
41.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
40.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
39.9
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
39.7
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
39.6
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
39.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
39.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
38.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
37.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
37.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
37.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
36.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
36.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
36.6
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
36.3
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
36.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
35.8
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
35.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
35.1
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
34.4
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
34.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
33.2
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
32.7
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
32.4
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
32.3
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
32.1
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
32.0
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
31.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
31.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
31.2
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
31.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
30.1
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
28.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
27.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
27.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
26.6
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
25.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
23.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
23.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
23.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
23.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
23.2
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
22.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
22.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
22.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
22.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
22.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
21.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
20.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
18.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
15.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
13.8
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
13.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
12.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
11.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC39A6 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
296.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
119.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
107.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
102.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
91.9
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
90.7
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
89.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
87.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
76.2
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
74.9
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
73.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
71.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
65.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
60.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
57.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
57.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
56.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
56.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
55.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
54.0
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
52.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
51.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
51.1
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
51.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
50.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
49.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
49.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
46.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
46.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
46.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
45.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
45.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
44.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
43.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
43.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
42.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
42.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
42.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
42.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
42.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
41.9
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
41.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
41.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
40.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
40.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
38.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
38.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
38.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
38.0
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
37.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
37.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
37.4
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
37.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
37.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
37.1
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
37.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
36.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
36.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
36.3
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
36.2
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
36.1
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
34.7
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
34.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
33.8
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
33.7
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
33.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
33.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
33.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
32.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
32.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
32.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
32.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
31.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
31.9
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
31.9
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
31.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
31.1
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
31.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
31.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
30.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
30.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
30.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
29.9
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
29.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
29.0
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
27.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
27.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
27.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
27.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
27.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
26.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
26.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
26.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
26.2
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
26.1
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
25.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
25.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
25.6
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
25.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
25.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
25.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
25.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
25.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
24.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
24.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
24.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
24.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
24.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
24.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
24.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
24.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
24.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
23.7
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
23.5
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
23.3
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
23.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
23.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
23.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
22.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
22.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
22.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
22.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
22.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
22.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
22.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
21.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
21.9
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
21.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
21.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
21.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
21.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
20.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
20.6
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
20.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
19.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
19.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
19.6
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
19.6
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
19.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
19.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
19.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
19.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
19.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
18.9
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
18.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
18.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
18.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
18.4
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
18.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
17.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
17.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
17.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
17.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
17.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
17.4
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
17.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
17.0
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
16.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
16.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
16.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
16.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
16.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
16.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.4
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
16.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
16.2
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
16.1
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.8
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
15.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.5
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
15.1
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
14.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
14.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
14.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
14.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
14.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
14.2
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
14.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
14.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
13.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
13.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
13.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.4
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.1
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
12.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
12.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
12.4
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
12.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
12.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.1
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
12.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
12.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
11.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
11.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.8
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
11.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
11.7
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.6
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
11.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
11.5
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
11.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
11.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
10.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.7
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
10.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
10.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
10.6
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
10.5
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
10.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
10.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
9.1
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
8.6
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
8.6
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
8.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
7.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
7.7
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
7.3
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
6.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.2
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
6.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.1
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
6.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
6.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
6.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
6.0
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
5.5
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
5.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
5.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
5.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
5.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
5.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
4.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
4.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
4.4
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
3.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
3.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
3.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
3.5
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.3
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0017850003
Tumor
1.0
CPT0012640003
Normal
0.8
CPT0077310003
Tumor
0.7
CPT0063630003
Tumor
0.7
CPT0078510003
Tumor
0.6
CPT0012180003
Tumor
0.5
CPT0079510001
Normal
0.5
CPT0079430001
Normal
0.4
CPT0012550003
Tumor
0.4
CPT0092790003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0002350011
Tumor
0.3
CPT0012670003
Tumor
0.3
CPT0087040003
Tumor
0.3
CPT0066470004
Tumor
0.3
CPT0013790003
Normal
0.3
CPT0018250001
Normal
0.2
CPT0078800003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0086030003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0012290003
Normal
0.2
CPT0015810003
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0012570003
Normal
0.2
CPT0012770003
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0077500001
Normal
0.1
CPT0087050003
Normal
0.1
CPT0065870003
Tumor
0.1
CPT0079380003
Tumor
0.1
CPT0023360001
Normal
0.1
CPT0014130001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0011240003
Tumor
0.1
CPT0012090003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0085670003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0089020003
Tumor
0.0
CPT0079230003
Tumor
0.0
CPT0002370001
Normal
0.0
CPT0001510001
Normal
0.0
CPT0088500001
Normal
0.0
CPT0088480003
Tumor
0.0
CPT0069010001
Normal
0.0
CPT0066430001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0014160003
Tumor
0.0
CPT0001500009
Tumor
0.0
CPT0088970003
Tumor
-0.1
CPT0012280003
Tumor
-0.1
CPT0015730003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0010110003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0006440003
Tumor
-0.1
CPT0010120001
Normal
-0.1
CPT0025230003
Tumor
-0.1
CPT0024680001
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0075570001
Normal
-0.1
CPT0077490003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0078830003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0089040001
Normal
-0.2
CPT0081620001
Normal
-0.2
CPT0086360003
Tumor
-0.2
CPT0078530001
Normal
-0.2
CPT0025060001
Normal
-0.3
CPT0023690003
Tumor
-0.3
CPT0025610001
Normal
-0.3
CPT0092310003
Normal
-0.3
CPT0086370003
Normal
-0.3
CPT0075560003
Tumor
-0.3
CPT0065820001
Normal
-0.3
CPT0078840001
Normal
-0.3
CPT0007320003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0079480003
Tumor
-0.3
CPT0088690003
Tumor
-0.4
CPT0001230001
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0065810003
Tumor
-0.4
CPT0006530001
Normal
-0.4
CPT0006950001
Normal
-0.4
CPT0081600003
Tumor
-0.5
CPT0026420001
Normal
-0.5
CPT0084590001
Normal
-0.6
CPT0071150004
Tumor
-0.6
CPT0079180003
Tumor
-0.7
CPT0025050003
Tumor
-0.7
CPT0086820003
Tumor
-0.7
CPT0026410003
Tumor
-0.8
CPT0024670003
Tumor
-0.8
CPT0086830003
Normal
-0.9
CPT0023350003
Tumor
-1.0
CPT0077320001
Normal
-1.2
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0025170003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0092190003
Normal
N/A
CPT0088550004
Tumor
N/A
CPT0077140001
Normal
N/A
CPT0075720003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0069160003
Tumor
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0025110003
Tumor
N/A
CPT0009020003
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0017450001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0025350003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0081880003
Tumor
N/A
CPT0009060003
Tumor
N/A
CPT0000890001
Normal
N/A
CPT0081990003
Tumor
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
